Contig 005192:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS164B12Sequence625005192 (4)ref|XP_009792642.1|2e-100PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Nicotian
JMSF024A04Sequence657005192 (4)ref|XP_009792642.1|2e-108PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Nicotian761012622 (4)emb|CDP14626.1|3e-17unnamed protein product [Coffea canephora]
JMSF030B06Sequence689005192 (4)ref|XP_009792642.1|2e-99PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Nicotian748012622 (4)emb|CDP14626.1|8e-14unnamed protein product [Coffea canephora]
JMSF034I13Sequence699005192 (4)ref|XP_009792642.1|9e-120PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Nicotian718012622 (4)emb|CDP14626.1|2e-11unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF030B06+                     GAANTCATACATGTTGTTGCCATCACCTATAATGAACTTGGATTTCCCTG
                      ____________________________________________________________
consensus                       GAANTCATACATGTTGTTGCCATCACCTATAATGAACTTGGATTTCCCTG
 
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JMSF030B06+           CCCTTGCAGCAGTGACAAGGGAAGGAACAAGTAACCTGTCACCGGGGCCAAAAATGCTGC
JMSF034I13+                                AAGGAACAAGTAACCTGTCACCGGGGCCAAAAATGCTGC
                      ____________________________________________________________
consensus             CCCTTGCAGCAGTGACAAGGGAAGGAACAAGTAACCTGTCACCGGGGCCAAAAATGCTGC
 
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JMSF030B06+           TGGGTCTGATGCAACATGTCAGCAGGCCA-TCTTGCCATTTGCCTTGAGGACTAGTGCCT
JMSF024A04+              GTCTGATGCAACATGTCAGCAGGCCATTCTTGCCATTTGCCTTGAGGACTAGTGCCT
JMFS164B12+                                                  TTGCCCTGAGGACTAGTGCCT
JMSF034I13+           TGGGTCTGATGCAACATGTCAGCAGGCCATTCTTGCCATTTGCCTTGAGGACTAGTGCCT
                      ____________________________________________________________
consensus             TGGGTCTGATGCAACATGTCAGCAGGCCATTCTTGCCATTTGCCTTGAGGACTAGTGCCT
 
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JMSF030B06+           CACCTTCAGCTTTAGTTGCAGAATACGAATCGTTGTGCTTATCAGGATATGGCATTGATT
JMSF024A04+           CACCTTCAGCTTTAGTTGCAGAATACGAATCGTTGTGCTTATCAGGATATGGCATTGATT
JMFS164B12+           CACCTTCAGCTTTAGTTGCAGAATACGAATCGTTGTGCTTATCAGGATATGGCATTGATT
JMSF034I13+           CACCTTCAGCTTTAGTTGCAGAATACGAATCGTTGTGCTTATCAGGATATGGCATTGATT
                      ____________________________________________________________
consensus             CACCTTCAGCTTTAGTTGCAGAATACGAATCGTTGTGCTTATCAGGATATGGCATTGATT
 
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JMSF030B06+           CATCCCCATTAAAAATTCCATGAACACCATCAAAGACTACACTGGGAGAGCTGGTGTATA
JMSF024A04+           CATCCCCATTAAAAATTCCATGAACACCATCAAAGACTACACTGGGAGAGCTGGTGTATA
JMFS164B12+           CATCCCCATTAAAAATTCCATGAACACCATCAAAGACTACACTGGGAGAGCTGGTGTATA
JMSF034I13+           CATCCCCATTAAAAATTCCATGAACACCATCAAAGACTACACTGGGAGAGCTGGTGTATA
                      ____________________________________________________________
consensus             CATCCCCATTAAAAATTCCATGAACACCATCAAAGACTACACTGGGAGAGCTGGTGTATA
 
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JMSF030B06+           TAAGTCTCTTCACTCTTAGCTCAACACAGGCATCAATTATATTCTTAGTTCCTTGTACAT
JMSF024A04+           TAAGTCTCTTCACTCTTAGCTCAACACAGGCATCAATTATATTCTTAGTTCCTTGTACAT
JMFS164B12+           TAAGTCTCTTCACTCTTAGCTCAACACAGGCATCAATTATATTCTTAGTTCCTTGTACAT
JMSF034I13+           TAAGTCTCTTCACTCTTAGCTCAACACAGGCATCAATTATATTCTTAGTTCCTTGTACAT
                      ____________________________________________________________
consensus             TAAGTCTCTTCACTCTTAGCTCAACACAGGCATCAATTATATTCTTAGTTCCTTGTACAT
 
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JMSF030B06+           TGACTGAGTGATGGAGCTGGTAGTTGTTGATTGACGAATCTGGGGCAGCCATGTGGAAAA
JMSF024A04+           TGACTGAGTGATGGAGCTGGTAGTTGTTGATTGACGAATCTGGGGCAGCCATGTGGAAAA
JMFS164B12+           TGACTGAGTGATGGAGCTGGTAGTTGTTGATTGACGAATCTGGGGCAGCCATGTGGAAAA
JMSF034I13+           TGACTGAGTGATGGAGCTGGTAGTTGTTGATTGACGAATCTGGGGCAGCCATGTGGAAAA
                      ____________________________________________________________
consensus             TGACTGAGTGATGGAGCTGGTAGTTGTTGATTGACGAATCTGGGGCAGCCATGTGGAAAA
 
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JMSF030B06+           CAGCCTCAGCTCCTTCACAAGCTTTGAGTACTTGGGACTTGTCCCGGAGATCCATGGACA
JMSF024A04+           CAGCCTCAGCTCCTTCACAAGCTTTGAGTACTTGGGACTTGTCCCGGAGATCCATGGACA
JMFS164B12+           CAGCCTCAGCTCCTTCACAAGCTTTGAGTACTTGGGACTTGTCCCGGAGATCCATGGACA
JMSF034I13+           CAGCCTCAGCTCCTTCACAAGCTTTGAGTACTTGGGACTTGTCCCGGAGATCCATGGACA
                      ____________________________________________________________
consensus             CAGCCTCAGCTCCTTCACAAGCTTTGAGTACTTGGGACTTGTCCCGGAGATCCATGGACA
 
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JMSF030B06+           CATAGANTGCGCGTCCAGATCGGAGTGCTTGGCCGAGAGTGCCATGTTNTTCATGTGGCT
JMSF024A04+           CATAGACTGCGCGTCCAGATCGGAGTGCTTGGCCGAGAGTGCCATGTTCTTCGTGTGGCT
JMFS164B12+           CATAGACTGCGCGTCCAGATCGGAGTGCTTGGCCGAGAGTGCCATGTTCTTCGTGTGGCT
JMSF034I13+           CATAGACTGCGCGTCCAGATCGGAGTGCTTGGCCGAGAGTGCCATGTTCTTCGTGTGGCT
                      ____________________________________________________________
consensus             CATAGACTGCGCGTCCAGATCGGAGTGCTTGGCCGAGAGTGCCATGTTCTTCGTGTGGCT
 
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JMSF030B06+           CCAANTTAATTTAAGGACCTAAATCCGCGACCCGAACGGAAAACATGTCGTAGCGAATTA
JMSF024A04+           CCAACTTAATTTCAGGACCTAAATCCGCGACCCGAACGGAAAACATGTCGTAGCGAATTA
JMFS164B12+           CCAACTTAATTTCAGGACCTAAATCCGCGACCCGAACGGAAAACATGTCGTAGCGAATTA
JMSF034I13+           CCAACTTAATTTCAGGACCTAAATCCGCGACCCGAACGGAAAACATGTCGTAGCGAATTA
                      ____________________________________________________________
consensus             CCAACTTAATTTCAGGACCTAAATCCGCGACCCGAACGGAAAACATGTCGTAGCGAATTA
 
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JMSF030B06+           GCATTTCCACCAAGTGGCGCGCCGCAAAGCCTCTACCGCCCGTCACCACTGACCATCTCT
JMSF024A04+           GCATTTCCACCAAGTGGCGCGCCGCAAAGCCTCTACCGCCCGTCACCACTGACCATCTCT
JMFS164B12+           GCATTTCCACCAAGTGGCGCGCCGCAAAGCCTCTACCGCCCGTCACCACTGACCATCTCT
JMSF034I13+           GCATTTCCACCAAGTGGCGCGCCGCAAAGCCTCTACCGCCCGTCACCACTGACCATCTCT
                      ____________________________________________________________
consensus             GCATTTCCACCAAGTGGCGCGCCGCAAAGCCTCTACCGCCCGTCACCACTGACCATCTCT
 
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JMSF030B06+           CTCCCCCGCTCACCATTGTTACTCTCCAGTAGAATTTG                      
JMSF024A04+           CTCCCCCGCTCACCATTGTTACTCTCCAGTAGAATTTGCAGAATTTTAACTTCTTATGGA
JMFS164B12+           CTCCCCCGCTCACCATTGTTACTCTCCAGTAGAATTTGCAGAATTTTAACTTCTTATGGA
JMSF034I13+           CTCCCCCGCTCACCATTGTTACTCTCCAGTAGAATTTGCAGAATTTTAACTTCTTATGGA
                      ____________________________________________________________
consensus             CTCCCCCGCTCACCATTGTTACTCTCCAGTAGAATTTGCAGAATTTTAACTTCTTATGGA
 
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JMSF024A04+           AGAAATATGAAAGTTTAGTTCAGAACCAGTGGAGCAGTTGAGAACTGAAGATGGTAACTC
JMFS164B12+           AGAAATATGAAAGTTTAGTTCAGAACCAGTGGAGCAGTTGAGAAC               
JMSF034I13+           AGAAATATGAAAGTTTAGTTCAGAACCAGTGGAGCAGTTGAGAACTGAAGATGGTAACTC
                      ____________________________________________________________
consensus             AGAAATATGAAAGTTTAGTTCAGAACCAGTGGAGCAGTTGAGAACTGAAGATGGTAACTC