Contig 005185:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033A19Sequence608005185 (2)ref|XP_011088950.1|187PREDICTED: uncharacterized protein LOC105170052 [Sesamum indicum]654005185 (2)ref|XP_011088950.1|243PREDICTED: uncharacterized protein LOC105170052 [Sesamum indicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF033A19- ATGATTTACAGGATGCATAGTACATACAT
                      ____________________________________________________________
consensus ATGATTTACAGGATGCATAGTACATACAT
 
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rJMSF033A19- ATGCATATATAAGTATGTATCTCTTTATCAAGATTACTTCTCTTTATCAACTTTCTTTTC
                      ____________________________________________________________
consensus ATGCATATATAAGTATGTATCTCTTTATCAAGATTACTTCTCTTTATCAACTTTCTTTTC
 
. : . : . : . : . : . :
rJMSF033A19- TATCCAGCTAGCAACAATGGGAGTAAGAGCAACAGTAGGTGGAAACCTTATAGGCGACGC
JMSF033A19+ GACGC
                      ____________________________________________________________
consensus TATCCAGCTAGCAACAATGGGAGTAAGAGCAACAGTAGGTGGAAACCTTATAGGCGACGC
 
. : . : . : . : . : . :
rJMSF033A19- GGCCTTGTGGGCAGCATAAGCCAACGCGAAAGTCCCAACTTTCTCACCCGTCTCATTAGG
JMSF033A19+ GGCNTTGTGGGCAGCATAAGCCAACGCGAAAGTCCCAACTTTCTCACCCGTCTCATTAGG
                      ____________________________________________________________
consensus GGCCTTGTGGGCAGCATAAGCCAACGCGAAAGTCCCAACTTTCTCACCCGTCTCATTAGG
 
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rJMSF033A19- TGAAATCCCGACCTTCTGTAGCAATGCTTGCACATCAACTCCAGCACTGATGAGGGCATA
JMSF033A19+ TGAAATCCCGACCTTCTGTAGCAATGCTTGCACATCAACTCCAGCACTGATGAGGGCATA
                      ____________________________________________________________
consensus TGAAATCCCGACCTTCTGTAGCAATGCTTGCACATCAACTCCAGCACTGATGAGGGCATA
 
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rJMSF033A19- GCAGAGGCCAAAAGATATCAAGGAGAGAGTAATGGAGGTAGCCAGGTATGCTCCTCCATA
JMSF033A19+ GCAGAGGCCAAAAGATATCAAGGAGAGAGTAATGGAGGTAGCCAGGTATGCTCCTCCATA
                      ____________________________________________________________
consensus GCAGAGGCCAAAAGATATCAAGGAGAGAGTAATGGAGGTAGCCAGGTATGCTCCTCCATA
 
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rJMSF033A19- TTTTGCCAAAAGCTCCTTTGCTTGGTCCCCTTTTGACTTATTTTCCTGGTTATCTTCATC
JMSF033A19+ TTTTGCCAAAAGCTCCTTTGCTTGGTCCCCTTTTGACTTATTTTCCTGGTTATCTTCATC
                      ____________________________________________________________
consensus TTTTGCCAAAAGCTCCTTTGCTTGGTCCCCTTTTGACTTATTTTCCTGGTTATCTTCATC
 
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rJMSF033A19- TTTTGAATTGAATATCTTCCAGAGACCTGCTTCTAGGCCATATTTCTTGGTGACTTCCTC
JMSF033A19+ TTTTGAATTGAATATCTTCCAGAGACCTGCTTCTAGGCCATATTTCTTGGTGACTTCCTC
                      ____________________________________________________________
consensus TTTTGAATTGAATATCTTCCAGAGACCTGCTTCTAGGCCATATTTCTTGGTGACTTCCTC
 
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rJMSF033A19- TGCAGATGTCTGGGATTTGATTTCCTCTGTTTTCTCCTTCACAGCCCTCACTTTGAGCTT
JMSF033A19+ TGCAGATGTCTGGGATTTGATTTCCTCTGTTTTCTCCTTCACAGCCCTCACTTTGAGCTT
                      ____________________________________________________________
consensus TGCAGATGTCTGGGATTTGATTTCCTCTGTTTTCTCCTTCACAGCCCTCACTTTGAGCTT
 
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rJMSF033A19- ACTGAAACTGGGCTTGGAATTTGCAGAAGAGCTTGATGCCCTGTTTGGTTTTCCAGAACT
JMSF033A19+ ACTGAAACTGGGCTTGGAATTTGCAGAAGAGCTTGATGCCCTGTTTGGTTTTCCAGAACT
                      ____________________________________________________________
consensus ACTGAAACTGGGCTTGGAATTTGCAGAAGAGCTTGATGCCCTGTTTGGTTTTCCAGAACT
 
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rJMSF033A19- CAGGGGAGCCCCAGGAGGGGAAGAGAAGAGTGCAGTTTTAGTGTANTANTGAGAAGGGAG
JMSF033A19+ CAGGGGAGCCCCAGGAGGGGAAGAGAAGAGTGCAGTTTTAGTGTAGTAGTGAGAAGGGAG
                      ____________________________________________________________
consensus CAGGGGAGCCCCAGGAGGGGAAGAGAAGAGTGCAGTTTTAGTGTAGTAGTGAGAAGGGAG
 
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rJMSF033A19- GTGCANATGANCGGCCATTGTTAAA
JMSF033A19+ GTGCAGATGAGCGGCCATTGTTAAAAGTAGCTAAAGAACTATCTCTTCTGGTTGTTTTAA
                      ____________________________________________________________
consensus GTGCAGATGAGCGGCCATTGTTAAAAGTAGCTAAAGAACTATCTCTTCTGGTTGTTTTAA
 
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JMSF033A19+ CTTTGTTATCCAAACATGGCCTTGATACTTTCTTCCTGGACAGAGAGAGAACAATTTTCC
                      ____________________________________________________________
consensus CTTTGTTATCCAAACATGGCCTTGATACTTTCTTCCTGGACAGAGAGAGAACAATTTTCC