| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF020E23 | Sequence | 520 | 005173 (9) | ref|XP_009591129.1| | 135 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] | 718 | 005173 (9) | ref|XP_009591129.1| | 173 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] |
| JMFN012P14 | Sequence | 627 | 005173 (9) | ref|XP_009591129.1| | 214 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] | |||||
| JMSF013N09 | Sequence | 444 | 005173 (9) | ref|XP_009591129.1| | 154 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] | 753 | 005173 (9) | ref|XP_009591129.1| | 220 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] |
| JMSF032D23 | Sequence | 695 | 005173 (9) | ref|XP_009591129.1| | 224 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] | 594 | 005173 (9) | ref|XP_009591129.1| | 219 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] |
| JMSF037L14 | Sequence | 650 | 005173 (9) | ref|XP_009591129.1| | 216 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] | 677 | 005173 (9) | ref|XP_009591129.1| | 210 | PREDICTED: uncharacterized protein LOC104088192 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF037L14- AAAAACTTACAGAAAAGGACA
rJMSF013N09- AAAACTTACAGAAAAGGACA
____________________________________________________________
consensus AAAAACTTACAGAAAAGGACA
. : . : . : . : . : . :
rJMSF037L14- GAATAGAAGGAATAAAGCTTTTGTCGTATGAAGTAACTTTCCTTCACCAAGCTACTAAGA
rJMSF013N09- GAATAGAAGGAATAAAGCTTTTGTCGTATGAAGTAACTTTCCTTCACCAAGCTACTAAGA
rJMFF020E23- TTTGTCGTATGAAGTAACTTTCCTTCACCAAGCTACTAAGA
____________________________________________________________
consensus GAATAGAAGGAATAAAGCTTTTGTCGTATGAAGTAACTTTCCTTCACCAAGCTACTAAGA
. : . : . : . : . : . :
rJMSF037L14- CTTTTTATGTTTATTATTTTTTGATGTTTATTATAACAATGAACCTCAAAAGGAACTAGC
rJMSF032D23- TTTTATGTTTATTATTTTTTGATGTTTATTATAACAATGAACCTCAAAAGGAACTAGC
rJMSF013N09- CTTTTTATGTTTATTATTTTTTGATGTTTATTATAACAATGAACCTCAAAAGGAACTAGC
rJMFF020E23- CTTTTTATGTTTATTATTTTTTGATGTTTATTATAACAATGAACCTCAAAAGGAACTAGC
JMSF037L14+ TAACAATGAACCTCAAAAGGAACTAGC
JMSF032D23+ GTTTATTATAACAATGAACCTCAAAAGGAACTAGC
____________________________________________________________
consensus CTTTTTATGTTTATTATTTTTTGATGTTTATTATAACAATGAACCTCAAAAGGAACTAGC
. : . : . : . : . : . :
rJMSF037L14- AACGAGAATGGCTTGCCTACACCTTGCCGTAGCTTGCTCAAGCCTCTCATTTAATGTCTC
rJMSF032D23- AACGAGAATGGCTTGCCTACACCTTGCCGTAGCTTGCTCAAGCCTCTCATTTAATGTCTC
rJMSF013N09- AACGAGAATGGCTTGCCTACACCTTGCCGTAGCTTGCTCAAGCCTCTCATTTAATGTCTC
rJMFF020E23- AACGAGAATGGCTTGCCTACACCTTGCCGTAGCTTGCTCAAGCCTCTCATTTAATGTCTC
JMSF037L14+ AACGAGAATGGCTTGCCTACACCTTGCCGTAGCTTGCTCAAGCCTCTCATTTAATGTCTC
JMFN012P14+ AATGGCTTGCCTACACCTTGCCGTAGCTTGCTCAAGCCTCTCATTTAATGTCTC
JMSF032D23+ AACGAGAATGGCTTGCCTACACCTTGCCGTAGCTTGCTCAAGCCTCTCATTTAATGTCTC
____________________________________________________________
consensus AACGAGAATGGCTTGCCTACACCTTGCCGTAGCTTGCTCAAGCCTCTCATTTAATGTCTC
. : . : . : . : . : . :
rJMSF037L14- TTCTTTCACTGCAGCTTTCACCATGGCCAAGTCCATCTCCATTAGCTTCAACACTCTGAA
rJMSF032D23- TTCTTTCACTGCAGCTTTCACCATGGCCAAGTCCATCTCCATTAGCTTCAACACTCTGAA
rJMSF013N09- TTCTTTCACTGCAGCTTTCACCATGGCCAAGTCCATCTCCATTAGCTTCAACACTCTGAA
rJMFF020E23- TTCTTTCACTG-AGCTTTCACCATGGCCAAGTCCATCTCCATTAGCTTCAACACTCTGAA
JMSF037L14+ TTCTTTCACTGCAGCTTTCACCATGGCCAAGTCCATCTCCATTAGCTTCAACACTCTGAA
JMFN012P14+ TTCTTTCACTGCAGCTTTCACCATGGCCAAGTCCATCTCCATTAGCTTCAACACTCTGAA
JMSF032D23+ TTCTTTCACTGCAGCTTTCACCATGGCCAAGTCCATCTCCATTAGCTTCAACACTCTGAA
____________________________________________________________
consensus TTCTTTCACTGCAGCTTTCACCATGGCCAAGTCCATCTCCATTAGCTTCAACACTCTGAA
. : . : . : . : . : . :
rJMSF037L14- CAGCTCAGTGACCATTCTCTCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
rJMSF032D23- CAGCTCAGTGACCATTCTCTCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
rJMSF013N09- CAGCTCAGTGACCATTCTCTCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
rJMFF020E23- CAGCTCAGTGACCATTCTCTCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
JMSF037L14+ CAGCTCAGTGACCATTCTCTCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
JMFN012P14+ CAGCTCAGTGACCATTCTCTCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
JMFF020E23+ TCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
JMSF013N09+ C
JMSF032D23+ CAGCTCAGTGACCATTCTCTCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
____________________________________________________________
consensus CAGCTCAGTGACCATTCTCTCTTCGACTTTTCCTTCCTCCTGCAACACCTCTGCTTCTTC
. : . : . : . : . : . :
rJMSF037L14- TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACACATATTG
rJMSF032D23- TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACCCATATTG
rJMSF013N09- TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACCCATATTG
rJMFF020E23- TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACCCATATTG
JMSF037L14+ TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACACATATTG
JMFN012P14+ TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACCCATATTG
JMFF020E23+ TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACCCATATTG
JMSF013N09+ TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACCCATATTG
JMSF032D23+ TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACCCATATTG
____________________________________________________________
consensus TCTGGCTCTCTCCGCCACTATTTCTCCAACCTTGGCCAACAGAGCTGTTGACCCATATTG
. : . : . : . : . : . :
rJMSF037L14- TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
rJMSF032D23- TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
rJMSF013N09- TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
rJMFF020E23- TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
JMSF037L14+ TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
JMFN012P14+ TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
JMFF020E23+ TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
JMSF013N09+ TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
JMSF032D23+ TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
____________________________________________________________
consensus TCGTGCCATTATCAATCCTTCCAGCTTCTCCAAGAAGTCCATTATCACAAACCCAACTGG
. : . : . : . : . : . :
rJMSF037L14- CTCCTCTATCTGAATAGGCTTAGTTCTCTTACACCCAATCTCAAAGTTTCGTGGCTCAGG
rJMSF032D23- CTCCTCTATCTGAATAGGCTTAGTTCTCTTCCACCCAATCTCAAAGTTTCGTGGCTCAGG
rJMSF013N09- CTCCTCTATCTGAATAGGCTTAGTTCTCTTCCACCCAATCTCAAAGTTTCGTGGCTCAGG
rJMFF020E23- CTCCTCTATCTGAATAGGCTTAGTTCTCTTCCACCCAATCTCAAAGTTTCGTGGCTCAGG
JMSF037L14+ CTCCTCTATCTGAATAGGCTTAGTTCTCTTACACCCAATCTCAAAGTTTCGTGGCTCAGG
JMFN012P14+ CTCCTCTATCTGAATAGGCTTAGTTCTCTTCCACCCAATCTCAAAGTTTCGTGGCTCAGG
JMFF020E23+ CTCCTCTATCTGAATAGGCTTAGTTCTCTTCCACCCAATCTCAAAGTTTCGTGGCTCAGG
JMSF013N09+ CTCCTCTATCTGAATAGGCTTAGTTCTCTTCCACCCAATCTCAAAGTTTCGTGGCTCAGG
JMSF032D23+ CTCCTCTATCTGAATAGGCTTAGTTCTCTTCCACCCAATCTCAAAGTTTCGTGGCTCAGG
____________________________________________________________
consensus CTCCTCTATCTGAATAGGCTTAGTTCTCTTCCACCCAATCTCAAAGTTTCGTGGCTCAGG
. : . : . : . : . : . :
rJMSF037L14- CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
rJMSF032D23- CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
rJMSF013N09- CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
rJMFF020E23- CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
JMSF037L14+ CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
JMFN012P14+ CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
JMFF020E23+ CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
JMSF013N09+ CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
JMSF032D23+ CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
____________________________________________________________
consensus CTTTGCAAGCCCAATTCTTGATTTTCTATCCCTGATGATTGCGGATCTTCGTCGTTTTTC
. : . : . : . : . : . :
rJMSF037L14- AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
rJMSF032D23- AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
rJMSF013N09- AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
rJMFF020E23- AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
JMSF037L14+ AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
JMFN012P14+ AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
JMFF020E23+ AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
JMSF013N09+ AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
JMSF032D23+ AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
____________________________________________________________
consensus AATGGGGAATTTGTCTGCAGGGGTGGTTGCTACCTCGCTAGGAGTTGGGAAGTCAGGGTC
. : . : . : . : . : . :
rJMSF037L14- GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAA
rJMSF032D23- GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAA
rJMSF013N09- GGTTTCTGGCTCTGGTGTTGAAGAANAAGTGCATTTGATGGCAAACTGCTTTCGAAGAAC
rJMFF020E23- GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAAGAAC
JMSF037L14+ GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAAGAAC
JMFN012P14+ GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAAGAAC
JMFF020E23+ GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAAGAAC
JMSF013N09+ GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAAGAAC
JMSF032D23+ GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAAGAAC
____________________________________________________________
consensus GGTTTCTGGCTCTGGTGTTGAAGAAGAAGTGCATTTGATGGCAAACTGCTTTCGAAGAAC
. : . : . : . : . : . :
rJMSF013N09- TGAAGGGTTTGGATGAATTACGTGAAAAGGGAGTTGAAATATACTANAAGCCATGACTAT
rJMFF020E23- TGAAGGGTTTGGATGAATTACGTGAAAAGGGAGTTGAAATATACTAGAAGCCATGACTAT
JMSF037L14+ TGAAGGGTTTGGATGAATTACGTGAAAAGGGAGTTGAAATATACTAGAAGCCATGACTAT
JMFN012P14+ TGAAGGGTTTGGATGAATTACGTGAAAAGGGAGTTGAAATATACTAGAAGCCATGACTAT
JMFF020E23+ TGAAGGGTTTGGATGAATTACGTGAAAAGGGAGTTGAAATATACTAGAAGCCATGACTAT
JMSF013N09+ TGAAGGGTTTGGATGAATTACGTGAAAAGGGAGTTGAAATATACTAGAAGCCATGACTAT
JMSF032D23+ TGAAGGGTTTGGATGAATTACGTGAAAAGGGAGTTGAAATATACTAGAAGCCATGACTAT
____________________________________________________________
consensus TGAAGGGTTTGGATGAATTACGTGAAAAGGGAGTTGAAATATACTAGAAGCCATGACTAT
. : . : . : . : . : . :
rJMSF013N09- NGGTAAGTGAAGC
rJMFF020E23- TGGTAAGTGAAGCACGAA
JMSF037L14+ TGGTAAGTGAAGCACGAAGAC
JMFN012P14+ TGGTAAGTGAAGCACGAAGACTGAAGAATCAGA
JMFF020E23+ TGGTAAGTGAAGCACGAAGACTGAAGAATCAGAGTTGAAGGAGATGGATATATGA
JMSF013N09+ TGGTAAGTGAAGCACGAAGA
JMSF032D23+ TGGTAAGTGAAGCACGAAGACTGAAGAATCAGAGTTGAAGGAGATGGATATATGATGATC
____________________________________________________________
consensus TGGTAAGTGAAGCACGAAGACTGAAGAATCAGAGTTGAAGGAGATGGATATATGATGATC