Contig 005172:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031L17Sequence558005172 (2)ref|XP_006355933.1|3e-100PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Solanum tuberosum]153002908 (2)
JMSF032B20Sequence670005172 (2)ref|XP_006355933.1|6e-129PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Solanum tuberosum]648002908 (2)ref|XP_004163603.1|1e-31PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 2-like [Cucumis sativus]

Alignment

This contig is upended


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JMSF032B20+                                                             GAACTGCGAG
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consensus                                                               GAACTGCGAG
 
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JMSF032B20+           ACCAACCTTAGGTGCTCATGTTCCAATCTTGAATTCCAGTAGACCAAGCCATAATCGAGC
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consensus             ACCAACCTTAGGTGCTCATGTTCCAATCTTGAATTCCAGTAGACCAAGCCATAATCGAGC
 
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JMSF031L17+                              GCTTCAACTCTGTCACCAAATCATCTTTTCCAGCCAGTATT
JMSF032B20+           TTGAAAGTTGCTCCATATTGCTTCAACTCTGTCACCAAATCATCTTTTCCAGCCAGTATT
                      ____________________________________________________________
consensus             TTGAAAGTTGCTCCATATTGCTTCAACTCTGTCACCAAATCATCTTTTCCAGCCAGTATT
 
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JMSF031L17+           TCAAAGCTTGGTACTCGAAATTCATTTGTAATACTTCCAATNTTATTCACAATTGTCTGG
JMSF032B20+           TCAAAGCTTGGTACTCGAAATTCATTTGTAATACTTCCAATTTTATTCACAATTGTCTGG
                      ____________________________________________________________
consensus             TCAAAGCTTGGTACTCGAAATTCATTTGTAATACTTCCAATTTTATTCACAATTGTCTGG
 
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JMSF031L17+           AGTCTGGGGTAATTTTTATCATAGATAACTTTTGCAATGACATCTTTATATGGAAGAAGT
JMSF032B20+           AGTCTGGGGTAATTTTTATCATAGATAACTTTTGCAATGACATCTTTATATGGAAGAAGT
                      ____________________________________________________________
consensus             AGTCTGGGGTAATTTTTATCATAGATAACTTTTGCAATGACATCTTTATATGGAAGAAGT
 
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JMSF031L17+           TCATCAGTTATGTTCAAATGAGCAATATGGCCTATTGTCTCAAAGGATGATGGAACTTCN
JMSF032B20+           TCATCAGTTATGTTCAAATGAGCAATATGGCCTATTGTCTCAAAGGATGATGGAACTTCA
                      ____________________________________________________________
consensus             TCATCAGTTATGTTCAAATGAGCAATATGGCCTATTGTCTCAAAGGATGATGGAACTTCA
 
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JMSF031L17+           AGTCCAGGAGGAAGAATCTGTTTTNGTATATGGTCTGAACTCCAATAAGAATACCCCAGT
JMSF032B20+           AGTCCAGGAGGAAGAATCTGTTTTAGTATATGGTCTGAACTCCAATAAGAATACCCCAGT
                      ____________________________________________________________
consensus             AGTCCAGGAGGAAGAATCTGTTTTAGTATATGGTCTGAACTCCAATAAGAATACCCCAGT
 
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JMSF031L17+           GTAAGGGAATATGGAACNACGTCGAACTCACAAAGGCCTTTCAAATCNGCAAGCGTNTGA
JMSF032B20+           GTAAGGGAATATGGAACAACGTCGAACTCACAAAGGCCTTTCAAATCTGCAAGCGTCTGA
                      ____________________________________________________________
consensus             GTAAGGGAATATGGAACAACGTCGAACTCACAAAGGCCTTTCAAATCTGCAAGCGTCTGA
 
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JMSF031L17+           GCTGGAANTTNTGATAAATCTGAATTTTGGATCTTTTCAGATAAAA              
JMSF032B20+           GCTGGAACTTCTGATAAATCTGAATTTTGGATCTTTTCAGATAAAACCAACATCCGGGTT
                      ____________________________________________________________
consensus             GCTGGAACTTCTGATAAATCTGAATTTTGGATCTTTTCAGATAAAACCAACATCCGGGTT
 
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JMSF032B20+           TTTTCAGAAGCAGGATCTTCCACAATAGGCTTGATGCGTGGCTTGTCAAGCAAATATCCA
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consensus             TTTTCAGAAGCAGGATCTTCCACAATAGGCTTGATGCGTGGCTTGTCAAGCAAATATCCA
 
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JMSF032B20+           TTGAGTATCCGTGTGGCAACATTGCAATACTCCCGTGGAATTCGAAGCGCCCACAACTTC
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consensus             TTGAGTATCCGTGTGGCAACATTGCAATACTCCCGTGGAATTCGAAGCGCCCACAACTTC
 
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JMSF032B20+           AGTTCCACATCAAACTTGCTCTCATCCAACTCCACCATTGTAGACAGCGTAGAAATCTCC
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consensus             AGTTCCACATCAAACTTGCTCTCATCCAACTCCACCATTGTAGACAGCGTAGAAATCTCC