Contig 005169:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013D03Sequence541005169 (5)ref|XP_009592302.1|9e-99PREDICTED: conserved oligomeric Golgi complex subunit 6 [Nicotiana tomentosifor689002555 (3)ref|XP_009592302.1|7e-86PREDICTED: conserved oligomeric Golgi complex subunit 6 [Nicotiana tomentosifor
JMFF014M07Sequence513005169 (5)ref|XP_009592302.1|2e-91PREDICTED: conserved oligomeric Golgi complex subunit 6 [Nicotiana tomentosifor702002555 (3)emb|CDP07184.1|7e-83unnamed protein product [Coffea canephora]
JMFS158A09Sequence429005169 (5)ref|XP_009592302.1|1e-75PREDICTED: conserved oligomeric Golgi complex subunit 6 [Nicotiana tomentosifor
JMSF005D21Sequence365005169 (5)gb|EYU37491.1|2e-55hypothetical protein MIMGU_mgv1a002271mg [Erythranthe guttata]
JMSF031N12Sequence584005169 (5)ref|XP_009592302.1|8e-79PREDICTED: conserved oligomeric Golgi complex subunit 6 [Nicotiana tomentosifor751002555 (3)emb|CDP07184.1|5e-93unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF013D03+ AGGAGCACTTTGCAGTTTGCATGTATTTCTTGAACATGAGCAAGTGCCTTGAAGAAATT
JMFF014M07+ CTTGAACATGAGCAAGTGCCTTGAAGAAATT
                      ____________________________________________________________
consensus AGGAGCACTTTGCAGTTTGCATGTATTTCTTGAACATGAGCAAGTGCCTTGAAGAAATT
 
. : . : . : . : . : . :
JMFF013D03+ TTCATTAAGGTCTTCCTCCCTTAGTGCATTTATCTCCTCATTTGATAGTTGATAATCACG
JMFF014M07+ TTCATTAAGGTCTTCCTCCCTTAGTGCATTTATCTCCTCATTTGATAGTTGATAATCACG
JMFS158A09+ CCTCATTTGATAGTTGATAATCACG
JMSF031N12+ TCCCTTAGTGCATTTATCTCCTCATTTGATAGTTGATAATCACG
                      ____________________________________________________________
consensus TTCATTAAGGTCTTCCTCCCTTAGTGCATTTATCTCCTCATTTGATAGTTGATAATCACG
 
. : . : . : . : . : . :
JMFF013D03+ TAGAAAGCAAGACACTATCTCTTGCCTCTGAGTAGTAATTTCAAGTTCCTGTTTCAGCCT
JMFF014M07+ TAGAAAGCAAGACACTATCTCTTGCCTCTGAGTAGTAATTTCAAGTTCCTGTTTCAGCCT
JMFS158A09+ TAGAAAGCAAGACACTATCTCTTGCCTCTGAGTAGTAATTTCAAGTTCCTGTTTCAGCCT
JMSF031N12+ TAGAAAGCAAGACACTATCTCTTGCCTCTGAGTAGTAATTTCAAGTTCCTGTTTCAGCCT
                      ____________________________________________________________
consensus TAGAAAGCAAGACACTATCTCTTGCCTCTGAGTAGTAATTTCAAGTTCCTGTTTCAGCCT
 
. : . : . : . : . : . :
JMFF013D03+ CTCTGTAGTACTAATAATATCACCAGTGGTGGCATTGCAACTGTTTAAAGCCAAAGCAAT
JMFF014M07+ CTCTGTAGTACTAATAATATCACCAGTGGTGGCATTGCAACTGTTTAAAGCCAAAGCAAT
JMFS158A09+ CTCTGTAGTACTAATAATATCACCAGTGGTGGCATTGCAACTGTTTAAAGCCAAAGCAAT
JMSF005D21+ TCTGTAGTACTAATAATATCACCAGTGGTGGCATTGCAACTGTTTAAAGCCAAAGCAAT
JMSF031N12+ CTCTGTAGTACTAATAATATCACCAGTGGTGGCATTGCAACTGTTTAAAGCCAAAGCAAT
                      ____________________________________________________________
consensus CTCTGTAGTACTAATAATATCACCAGTGGTGGCATTGCAACTGTTTAAAGCCAAAGCAAT
 
. : . : . : . : . : . :
JMFF013D03+ TTTGTCACAGCACTCGGCTAGCGCATTGACTTCTTCTTCCACCTGATCCAAGGCCTTCTG
JMFF014M07+ TTTGTCACAGCACTCGGCTAGCGCATTGACTTCTTCTTCCACCTGATCCAAGGCCTTCTG
JMFS158A09+ TTTGTCACAGCACTCGGCTAGCGCATTGACTTCTTCTTCCACCTGATCCAAGGCCTTCTG
JMSF005D21+ TTTGTCACAGCACTCGGCTAGCGCATTGACTTCTTCTTCCACCTGATCCAAGGCCTTCTG
JMSF031N12+ TTTGTCACAGCACTCGGCTAGCGCATTGACTTCTTCTTCCACCTGATCCAAGGCCTTCTG
                      ____________________________________________________________
consensus TTTGTCACAGCACTCGGCTAGCGCATTGACTTCTTCTTCCACCTGATCCAAGGCCTTCTG
 
. : . : . : . : . : . :
JMFF013D03+ AGCGGAAGAGGAGGCGAGGAGGAACTCCTGATTGATGGATAGCGCGCGCTTCTCGATAGT
JMFF014M07+ AGCGGAAGAGGAGGCGAGGAGGAACTCCTGATTGATGGATAGCGCGCGCTTCTCGATAGT
JMFS158A09+ AGCGGAAGAGGAGGCGAGGAGGAACTCCTGATTGATGGATAGCGCGCGCTTCTCGATAGT
JMSF005D21+ AGCGGAAGAGGAGGCGAGGAGGAACTCCTGATTGATGGATAGCGCGCGCTTCTCGATAGT
JMSF031N12+ AGCGGAAGAGGAGGCGAGGAGGAACTCCTGATTGATGGATAGCGCGCGCTTCTCGATAGT
                      ____________________________________________________________
consensus AGCGGAAGAGGAGGCGAGGAGGAACTCCTGATTGATGGATAGCGCGCGCTTCTCGATAGT
 
. : . : . : . : . : . :
JMFF013D03+ AGATCTGAGGTTCCGGCGACCGTGAGCGGTGTTTTCTGTGTAGAAAGTCGAGAGAGTGTT
JMFF014M07+ AGATCTGAGGTTCCGGCGACCGTGAGCGGTGTTTTCTGTGTAGAAAGTCGAGAGAGTGTT
JMFS158A09+ AGATCTGAGGTTCCGGCGACCGTGAGCGGTGTTTTCTGTGTAGAAAGTCGAGAGAGTGTT
JMSF005D21+ AGATCTGAGGTTCCGGCGACCGTGAGCGGTGTTTTCTGTGTAGAAAGTCGAGAGAGTGTT
JMSF031N12+ AGATCTGAGGTTCCGGCGACCGTGAGCGGTGTTTTCTGTGTAGAAAGTCGAGAGAGTGTT
                      ____________________________________________________________
consensus AGATCTGAGGTTCCGGCGACCGTGAGCGGTGTTTTCTGTGTAGAAAGTCGAGAGAGTGTT
 
. : . : . : . : . : . :
JMFF013D03+ GAGAGAAGCAAGTAGATCCGGCGTGTCTGTACGGGTCTCCAATACTTTCTTCAGCTTCCG
JMFF014M07+ GAGAGAAGCAAGTAGATCCGGCGTGTCTGTACGGGTCTCCAATACTTTCTTCAGCTTCCG
JMFS158A09+ GAGAGAAGCAAGTAGATCCGGCGTGTCTGTACGGGTCTCCAATACTTTCTTCAGCTTCCG
JMSF005D21+ GAGAGAAGCAAGTAGATCCGGCGTGTCTGTACGGGTCTCCAATACTTTCTTCAGCTTCCG
JMSF031N12+ GAGAGAAGCAAGTAGATCCGGCGTGTCTGTACGGGTCTCCAATACTTTCTTCAGCTTCCG
                      ____________________________________________________________
consensus GAGAGAAGCAAGTAGATCCGGCGTGTCTGTACGGGTCTCCAATACTTTCTTCAGCTTCCG
 
. : . : . : . : . : . :
JMFF013D03+ GGATAGCCCTGGTGCCAATGCCGTCGCCGTCCCCATTCTTTGCCTCTATCTCTATCTCTC
JMFF014M07+ GGATAGCCCTGGTGCCAATGCCGTCGCCGTCCCCATTCTTTGCCTCTATCTCTATCTCTC
JMFS158A09+ GGATAGCCCTGGTGCCAATGCCGTCGCCGTCCCCATTCTTTGCC
JMSF005D21+ GGATAGCCCTGGTGCCAATGCCGTCGCCGTCCCCATTCTTTGCCTCTATCTCTATCTCTC
JMSF031N12+ GGATAGCCCTGGTGCCAATGCCGTCGCCGTCCCCATTCTTTGCCTCTATCTCTATCTCTC
                      ____________________________________________________________
consensus GGATAGCCCTGGTGCCAATGCCGTCGCCGTCCCCATTCTTTGCCTCTATCTCTATCTCTC
 
. : . : . : . : . : . :
JMFF013D03+ TT
JMFF014M07+ TT
JMSF005D21+ TT
JMSF031N12+ TTTGTCTGTAATTCTGTATTCTATAGCTTCATATATACACAGTTGTAAATTTTATGATAA
                      ____________________________________________________________
consensus TTTGTCTGTAATTCTGTATTCTATAGCTTCATATATACACAGTTGTAAATTTTATGATAA
 
. : . : . : . : . : . :
JMSF031N12+ TCAGAAGTGATCACAAATGGTAGAACTGTTTCTTCTTCGGTTCTTCCCCAGTGTTTCTCC
                      ____________________________________________________________
consensus TCAGAAGTGATCACAAATGGTAGAACTGTTTCTTCTTCGGTTCTTCCCCAGTGTTTCTCC