Contig 005167:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF031L12Sequence630005167 (2)ref|XP_010660689.1|5e-14PREDICTED: aspartokinase 2, chloroplastic isoform X1 [Vitis vinifera]743004413 (2)ref|XP_011097258.1|3e-136PREDICTED: aspartokinase 2, chloroplastic isoform X1 [Sesamum indicum]
JMSF050N17Sequence668005167 (2)ref|XP_010660689.1|1e-36PREDICTED: aspartokinase 2, chloroplastic isoform X1 [Vitis vinifera]764004413 (2)ref|XP_011097258.1|1e-137PREDICTED: aspartokinase 2, chloroplastic isoform X1 [Sesamum indicum]

Alignment

This contig is upended


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JMSF050N17+                                                      TGCTCCAGCCAGTAAGA
                      ____________________________________________________________
consensus                                                        TGCTCCAGCCAGTAAGA
 
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JMSF050N17+           GGTTGTTTGTAGTCTTTCCCATAGCTGAGAGAACAATAACAGGCTTCTCCTCTGGAAAGC
                      ____________________________________________________________
consensus             GGTTGTTTGTAGTCTTTCCCATAGCTGAGAGAACAATAACAGGCTTCTCCTCTGGAAAGC
 
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JMSF050N17+           TGAGGATGAGGTCAGCTACTTCTCTCATCCTCTGGGCAGAGGCTACTGATGAACCACCAA
JMSF031L12+                                         TCTGGGCAGAGGCTACTGATGAACCACCAA
                      ____________________________________________________________
consensus             TGAGGATGAGGTCAGCTACTTCTCTCATCCTCTGGGCAGAGGCTACTGATGAACCACCAA
 
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JMSF050N17+           ATTTCATCACACATGTGAATTCACTGGGTACTCCATCAAAACCCAAGTTTTGAGTTCCAC
JMSF031L12+           ATTTCATCACACATGTGAATTCACTGGGTACTCCATCAAAACCCAAGTTTTGAGTTCCAC
                      ____________________________________________________________
consensus             ATTTCATCACACATGTGAATTCACTGGGTACTCCATCAAAACCCAAGTTTTGAGTTCCAC
 
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JMSF050N17+           TCAGTTGAACTAGATCTATAGTCTGTGACTTACAACTTACCCTCAGTACTCGTGATCTGG
JMSF031L12+           TCAGTTGAACTAGATCTATAGTCTGTGACTTACAACTTACCCTCAGTACTCGTGATCTGG
                      ____________________________________________________________
consensus             TCAGTTGAACTAGATCTATAGTCTGTGACTTACAACTTACCCTCAGTACTCGTGATCTGG
 
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JMSF050N17+           AAGAACCCTTTATGGACGTGCAAACTCCATAAACATGGCGGAGATCTATAGTCTGTGACC
JMSF031L12+           AAGAACCCTTTATGGACGTGCAAACTCCATAAACATGGCGGAGATCTATAGTCTGTGACC
                      ____________________________________________________________
consensus             AAGAACCCTTTATGGACGTGCAAACTCCATAAACATGGCGGAGATCTATAGTCTGTGACC
 
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JMSF050N17+           ATAATGGCCGGAAGTGCAAACTCGCCTTACATTCTTTTGGGAAATAAGGGTAGGGAGTTG
JMSF031L12+           ATAATGGCCGGAAGTGCAAACTCGCCTTACATTCTTTTGGGAAATAAGGGTAGGGAGTTG
                      ____________________________________________________________
consensus             ATAATGGCCGGAAGTGCAAACTCGCCTTACATTCTTTTGGGAAATAAGGGTAGGGAGTTG
 
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JMSF050N17+           TGCCACGTAAATGCATCAAGGTTTCCATAGCAAAACAGTAGAGGAAAACAAGTGTTGTTT
JMSF031L12+           TGCCACGTAAATGCATCAAGGTTTCCATAGCAAAACAGTAGAGGAAAACAAGTGTTGTTT
                      ____________________________________________________________
consensus             TGCCACGTAAATGCATCAAGGTTTCCATAGCAAAACAGTAGAGGAAAACAAGTGTTGTTT
 
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JMSF050N17+           TGTGAATCAGTTACTTCGACAGATATAGAGAGTTGGATTTGGTGTAAAGCAGAGCCAATG
JMSF031L12+           TGTGAATCAGTTACTTCGACAGATATAGAGAGTTGGATTTGGTGTAAAGCAGAGCCAATG
                      ____________________________________________________________
consensus             TGTGAATCAGTTACTTCGACAGATATAGAGAGTTGGATTTGGTGTAAAGCAGAGCCAATG
 
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JMSF050N17+           CAAGTACCTAGGGAAATTACCTCTCCCAGCCAGGGAAATATGCTTAGTAACCTAGACGCG
JMSF031L12+           CAAGTACCTAGGGAAATTACCTCTCCCAGCCAGGGAAATATGCTTAGTAACCTAGACGCG
                      ____________________________________________________________
consensus             CAAGTACCTAGGGAAATTACCTCTCCCAGCCAGGGAAATATGCTTAGTAACCTAGACGCG
 
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JMSF050N17+           CCAGCGGCAGAGATGGGGAGGGTATTCGAATTCGATTTTCAGCTCCCAAAGCTCTGGGGG
JMSF031L12+           CCAGCGGCAGAGATGGGGAGGGTATTCGAATTCGATTTTCAGCTCCCAAAGCTCTGGGGG
                      ____________________________________________________________
consensus             CCAGCGGCAGAGATGGGGAGGGTATTCGAATTCGATTTTCAGCTCCCAAAGCTCTGGGGG
 
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JMSF050N17+           TGACTGCTCCGCGGGATGCAGGCAGACGGCAGCTTTCAAAAGACTAGAA           
JMSF031L12+           TGACTGCTCCGCGGGATGCAGGCAGACGGCAGCTTTCAAAAGACTAGAATAATGCGAACG
                      ____________________________________________________________
consensus             TGACTGCTCCGCGGGATGCAGGCAGACGGCAGCTTTCAAAAGACTAGAATAATGCGAACG
 
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JMSF031L12+           CAGCTCTCTCAAGTCTAGTCTAAGGCAACCCGGCGGCGCGGCAAGGCAATTGCGCATTCC
                      ____________________________________________________________
consensus             CAGCTCTCTCAAGTCTAGTCTAAGGCAACCCGGCGGCGCGGCAAGGCAATTGCGCATTCC