clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007E09 | Sequence | 564 | 005159 (3) | ref|XP_004238228.1| | 9e-34 | PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Solanum lycopersicum] | 740 | 014809 | ref|XP_004238228.1| | 9e-70 | PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Solanum lycopersicum] |
JMSF030K21 | Sequence | 656 | 005159 (3) | ref|XP_009767052.1| | 1e-57 | PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like [Nicotiana sylvestris] | 672 | 014077 (2) | ref|XP_009594614.1| | 1e-84 | PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Nicotiana tomentosiformis] |
JMSF041P18 | Sequence | 766 | 005159 (3) | ref|XP_009767052.1| | 8e-82 | PREDICTED: protein BRASSINAZOLE-RESISTANT 1-like [Nicotiana sylvestris] | 743 | 014077 (2) | ref|XP_009594614.1| | 5e-84 | PREDICTED: protein BRASSINAZOLE-RESISTANT 1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMSF041P18+ AAGAGATGTTGAAGGCTGACATTGAATCTTTGGCCAAAGTTTCCAGATTGAAAGTC
____________________________________________________________
consensus AAGAGATGTTGAAGGCTGACATTGAATCTTTGGCCAAAGTTTCCAGATTGAAAGTC
. : . : . : . : . : . :
JMSF041P18+ TGCTTGAGAACCCTGGTTGGGGAAGAAAGCGGTGGGGTTACAGGGGCACTGTTCGATATC
____________________________________________________________
consensus TGCTTGAGAACCCTGGTTGGGGAAGAAAGCGGTGGGGTTACAGGGGCACTGTTCGATATC
. : . : . : . : . : . :
JMSF041P18+ CTTAGGGCAGGTAGTGACGAAGGAATGCTGTTATGGAGAAATACAAATGGATGTGGAGAA
____________________________________________________________
consensus CTTAGGGCAGGTAGTGACGAAGGAATGCTGTTATGGAGAAATACAAATGGATGTGGAGAA
. : . : . : . : . : . :
JMSF041P18+ ATATTGGCATCGCCTCGTGTTGGACTGGGACATGCCGAGGATAATGGACTAGCTTGGTAA
JMSF030K21+ GATAATGGACTAGCTTGGTAA
____________________________________________________________
consensus ATATTGGCATCGCCTCGTGTTGGACTGGGACATGCCGAGGATAATGGACTAGCTTGGTAA
. : . : . : . : . : . :
JMSF041P18+ GATGGAATTGGACTAGCAAAGTAGGAAGAAGGAGGGCTTGGATTGCGCGACGAGCTTGGG
JMSF030K21+ GATGGAATTGGACTAGCAAAGTAGGAAGATGGAGGGCTTGGATTGCGCGACGAGCTTGGG
____________________________________________________________
consensus GATGGAATTGGACTAGCAAAGTAGGAAGATGGAGGGCTTGGATTGCGCGACGAGCTTGGG
. : . : . : . : . : . :
JMSF041P18+ GTGATGTTCGCTGAAGTGCCTCCAATCTCCATTGGGATTGGCTTGCATCCCTTGCGATAA
JMFF007E09+ TGAAGTTCCTCCAATCTCCATCGGAGTTGGCTTGCATCCCTTGCGATAA
JMSF030K21+ GTGATGTTCGCTGAAGTGCCTCCAATCTCCATTGGGATTGGCTTGCATCCCTTGCGATAA
____________________________________________________________
consensus GTGATGTTCGCTGAAGTGCCTCCAATCTCCATTGGGATTGGCTTGCATCCCTTGCGATAA
. : . : . : . : . : . :
JMSF041P18+ GTGGTGCCATCGGGCTCGACGATCCAGCCAGCTTCAGTACAGAGAGCCTTGAGGACCTCG
JMFF007E09+ GTGGTGCCGTCGGGCTCGACGGTCCAGCCAGCTTCATGACAGAGAGCCTTGAGAACCTCG
JMSF030K21+ GTGGTGCCATCGGGCTCGACGATCCAGCCAGCTTCAGTACAGAGAGCCTTGAGGACCTCG
____________________________________________________________
consensus GTGGTGCCATCGGGCTCGACGATCCAGCCAGCTTCAGTACAGAGAGCCTTGAGGACCTCG
. : . : . : . : . : . :
JMSF041P18+ TTGTTATCACAGTGCTTGGGAAGATTATAGTTCCCCTGAGCTCTCAGACCCGTATATATC
JMFF007E09+ TTGTTGTCGCAGTGCTTAGGGAGATTGTAGTTCCCCTGAGCTCTCAGCCCGGAATATATC
JMSF030K21+ TTGTTATCACAGTGCTTGGGAAGATTATAGTTCCCCTGAGCTCTCAGACCCGTATATATC
____________________________________________________________
consensus TTGTTATCACAGTGCTTGGGAAGATTATAGTTCCCCTGAGCTCTCAGACCCGTATATATC
. : . : . : . : . : . :
JMSF041P18+ TTCGCAGCTATGGCTCTCCTCCTCCTCTCTCTCCGCCGGTTGTTCTCTCTCTCCCTCCAC
JMFF007E09+ TTAGCAGCTATGGCTCTCCTCCTCCGCTCTCTTCTCCGGTTATTCTCCCTCTCCCTCCAC
JMSF030K21+ TTCGCAGCTATGGCTCTCCTCCTCCTCTCTCTCCGCCGGTTGTTCTCTCTCTCCCTCCAC
____________________________________________________________
consensus TTCGCAGCTATGGCTCTCCTCCTCCTCTCTCTCCGCCGGTTGTTCTCTCTCTCCCTCCAC
. : . : . : . : . : . :
JMSF041P18+ GACGGCTTCCTCCTCCCGCTACTACTACCCCCAACGCCACCCTCGCCGCCGCCTCCCGAC
JMFF007E09+ GACGGCTTCCTCCTCCC
JMSF030K21+ GACGGCTTCCTCCTCCCGCTACTACTACCCCCAACGCCACCCTCGCCGCCGCCTCCCGAC
____________________________________________________________
consensus GACGGCTTCCTCCTCCCGCTACTACTACCCCCAACGCCACCCTCGCCGCCGCCTCCCGAC
. : . : . : . : . : . :
JMSF041P18+ AACGATGCCGCTGATCCTCCGGCTTCCCACATCATTTCCCTATCTCTCTCTATCTGGATG
JMSF030K21+ AACGATGCCGCTGATCCTCCGGCTTCCCACATCATTTCCCTATCTCTCTCTATCTGGATG
____________________________________________________________
consensus AACGATGCCGCTGATCCTCCGGCTTCCCACATCATTTCCCTATCTCTCTCTATCTGGATG
. : . : . : . : . : . :
JMSF041P18+ AATAGTACAGAGAGAAGAGAAGCGTATATGGCGTTTCAGAGTGCTCACGAGGAACACGAT
JMSF030K21+ AATAGTACAGAGAGAAGAGAAGCGTATATGGCGTTTCAGAGTGCTCACGAGGAACACGAT
____________________________________________________________
consensus AATAGTACAGAGAGAAGAGAAGCGTATATGGCGTTTCAGAGTGCTCACGAGGAACACGAT
. : . : . : . : . : . :
JMSF041P18+ CTCACAGCCTCTGCTTTCTGGTATTAGAAGAATCTCTCAGTTTCTTACT
JMSF030K21+ CTCACAGCCTCTGCTTTCTGGTATTAGAAGAATCTCTCAGTTTCTTACTACGGAGTACTC
____________________________________________________________
consensus CTCACAGCCTCTGCTTTCTGGTATTAGAAGAATCTCTCAGTTTCTTACTACGGAGTACTC