| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF046A17 | Sequence | 625 | 005156 (6) | emb|CDP04578.1| | 1e-43 | unnamed protein product [Coffea canephora] | |||||
| JMFS118D11 | Sequence | 610 | 005156 (6) | emb|CDP04578.1| | 2e-38 | unnamed protein product [Coffea canephora] | |||||
| JMSF013D10 | Sequence | 231 | 005156 (6) | 795 | 004293 (5) | ref|XP_004250065.1| | 3e-117 | PREDICTED: actin-related protein 7 [Solanum lycopersicum] | |||
| JMSF030I22 | Sequence | 660 | 005156 (6) | emb|CDP04578.1| | 2e-34 | unnamed protein product [Coffea canephora] | 700 | 004293 (5) | gb|KDO83435.1| | 5e-98 | hypothetical protein CISIN_1g017944mg [Citrus sinensis] |
| JMSF039F01 | Sequence | 623 | 005156 (6) | emb|CDP04578.1| | 1e-30 | unnamed protein product [Coffea canephora] | 928 | 004293 (5) | ref|XP_004250065.1| | 1e-169 | PREDICTED: actin-related protein 7 [Solanum lycopersicum] |
| JMSF049J09 | Sequence | 677 | 005156 (6) | emb|CDP04578.1| | 1e-44 | unnamed protein product [Coffea canephora] | 765 | 004293 (5) | ref|XP_004250065.1| | 2e-127 | PREDICTED: actin-related protein 7 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFF046A17+ GCCTTGGGAGTGCAAA
JMSF049J09+ CTGATAGCCTTGGGAGTGCAAA
____________________________________________________________
consensus CTGATAGCCTTGGGAGTGCAAA
. : . : . : . : . : . :
JMFF046A17+ GTGGATCAGTGAACAAGATTTGGCCCTCATTCCCCATTTCCCAACCAAGGCCGGTGTAAA
JMSF049J09+ GTGGATCAGTGAACAAGATTTGGCCCTCATTCCCCATTTCCCAACCAAGGCCGGTGTAAA
JMSF039F01+ CCCATTTCCCAACCAAGGCCGGTGTAAA
JMFS118D11+ GATCAGTGAACAAGATTTGGCCCTCATTCCCCATTTCCCAACCAAGGCCGGTGTAAA
JMSF030I22+ GATCAGTGAACAAGATTTGGCCCTCATTCCCCATTTCCCAACCAAGGCCGGTGTAAA
____________________________________________________________
consensus GTGGATCAGTGAACAAGATTTGGCCCTCATTCCCCATTTCCCAACCAAGGCCGGTGTAAA
. : . : . : . : . : . :
JMFF046A17+ GCACATGGTGCAATAGGTCTTCCATTGCATCCCAATCCTTCACAAAGCCACGGACAACTG
JMSF049J09+ GCACATGGTGCAATAGGTCTTCCATTGCATCCCAATCCTTCACAAAGCCACGGACAACTG
JMSF039F01+ GCACATGGTGCAATAGGTCTTCCATTGCATCCCAATCCTTCACAAAGCCACGGACAACTG
JMFS118D11+ GCACATGGTGCAATAGGTCTTCCATTGCATCCCAATCCTTCACAAAGCCACGGACAACTG
JMSF030I22+ GCACATGNTGCAATAGGTCTTCCATTGCATCCCAATCCTTCACAAAGCCACGGACAACTG
____________________________________________________________
consensus GCACATGGTGCAATAGGTCTTCCATTGCATCCCAATCCTTCACAAAGCCACGGACAACTG
. : . : . : . : . : . :
JMFF046A17+ GGTCCACCGCGTCTTCCTCCGCCGTTGCCGTCGCCTCCTCAGCCTCCCCATCCGCGGCAC
JMSF049J09+ GGTCCACCGCGTCTTCCTCCGCCGTTGCCGTCGCCTCCTCAGCCTCCCCATCCGCGGCAC
JMSF039F01+ GGTCCACCGCGTCTTCCTCCGCCGTTGCCGTCGCCTCCTCAGCCTCCCCATCCGCGGCAC
JMFS118D11+ GGTCCACCGCGTCTTCCTCCGCCGTTGCCGTCGCCTCCTCAGCCTCCCCATCCGCGGCAC
JMSF030I22+ GGTCCACCGCGTCTTCCTCCGCCGTAGCCGTCGCCTCNTCAGCCTCCCCATCCGCGGCAC
____________________________________________________________
consensus GGTCCACCGCGTCTTCCTCCGCCGTTGCCGTCGCCTCCTCAGCCTCCCCATCCGCGGCAC
. : . : . : . : . : . :
JMFF046A17+ TATCGTCCTCAGGAACGCGTTTCATTTGAGTTGGAATTATCATGGACGGAGCTTGGTCAG
JMSF049J09+ TATCGTCCTCAGGAACGCGTTTCATTTGAGTTGGAATTATCATGGACGGAGCTTGGTCAG
JMSF039F01+ TATCGTCCTCAGGAACGCGTTTCATTTGAGTTGGAATTATCATGGACGGAGCTTGGTCAG
JMFS118D11+ TATCGTCCTCAGGAACGCGTTTCATTTGAGTTGGAATTATCATGGACGGAGCTTGGTCAG
JMSF030I22+ TATCGTCCTCAGGAACGCGTTTCATNTGAGTTGGAATTATCATGGACGGAGCTTGGTCAG
____________________________________________________________
consensus TATCGTCCTCAGGAACGCGTTTCATTTGAGTTGGAATTATCATGGACGGAGCTTGGTCAG
. : . : . : . : . : . :
JMFF046A17+ GGACGGCGAAGCCGGCTTTGAGAAATTTAGAACCAGCATCCACCACCACCGCCTCCATCA
JMSF049J09+ GGACGGCGAAGCCGGCTTTGAGAAATTTAGAACCAGCATCCACCACCACCGCCTCCATCA
JMSF039F01+ GGACGGCGAAGCCGGCTTTGAGAAATTTAGAACCAGCATCCACCACCACCGCCTCCATCA
JMFS118D11+ GGACGGCGAAGCCGGCTTTGAGAAATTTAGAACCAGCATCCACCACCACCGCCTCCATCA
JMSF030I22+ GGACGGCGAAGCCGGCTTTGAGAAATTTAGAACCAGCATCCACCACCACCGCCTCCATCA
____________________________________________________________
consensus GGACGGCGAAGCCGGCTTTGAGAAATTTAGAACCAGCATCCACCACCACCGCCTCCATCA
. : . : . : . : . : . :
JMFF046A17+ CGGGAGATTTGAGTAATAGATGGATAAATATTCCGCTGATGGGGAAGAATGTGCAATATG
JMSF049J09+ CGGGAGATTTGAGTAATAGATGGATAAATATTCCGCTGATGGGGAAGAATGTGCAATATG
JMSF039F01+ CGGGAGATTTGAGTAATAGATGGATAAATATTCCGCTGATGGGGAAGAATGTGCAATATG
JMFS118D11+ CGGGAGATTTGAGTAATAGATGGATAAATATTCCGCTGATGGGGAAGAATGTGCAATATG
JMSF030I22+ CGGGAGATTTGAGTAATAGATGGATAAATATTCCGCTGATGGGGAAGAATGTGCAATATG
____________________________________________________________
consensus CGGGAGATTTGAGTAATAGATGGATAAATATTCCGCTGATGGGGAAGAATGTGCAATATG
. : . : . : . : . : . :
JMFF046A17+ TTGTTTGAAGAAGTGGAGACTACCTTTGTAGATCGGTAATTTTTTACTGGTGTCCTTTAG
JMSF049J09+ TTGTTTGAAGAAGTGGAGA----CTTTGTAGATCGGTAATTTTTTACTGGTGTCCTTTAG
JMSF039F01+ TTGTTTGAAGAAGTGGAGA----CTTTGTAGATCGGTAATTTTTTACTGGTGTCCTTTAG
JMFS118D11+ TTGTTTGAAGAAGTGGAGACTACCTTTGTAGATCGGTAATTTTTTACTGGTGTCCTTTAG
JMSF030I22+ TTGTTTGAAGAAGTGGAGACTACCTTTGTAGATCGGTAATTTTTTACTGGTGTCCTTTAG
____________________________________________________________
consensus TTGTTTGAAGAAGTGGAGACTACCTTTGTAGATCGGTAATTTTTTACTGGTGTCCTTTAG
. : . : . : . : . : . :
JMFF046A17+ TTGTGTAGGTAACGCCGAGGAAATCAGATCTGGTAATAAAAACGCCGATCTGAATACTGA
JMSF049J09+ TTGTGTAGGTAACGCCGAGGAAATCAGATCTGGTAATAAAAACGCCGATCTGAATACTGA
JMSF013D10+ GTAACGCCGAGGAANTCAGATCTGGTAATAAAAACGCCGATCTGAATACTGA
JMSF039F01+ TTGTGTAGGTAACGCCGAGGAAATCAGATCTGGTAATAAAAACGCCGATCTGAATACTGA
JMFS118D11+ TTGTGTAGGTAACGCCGAGGAAATCA--------------------GATCTGAATACTGA
JMSF030I22+ TTGTGTAGGTAACGCCGAGGAAATCAGATCTGGTAATAAAAACGCCGATCTGAATACTGA
____________________________________________________________
consensus TTGTGTAGGTAACGCCGAGGAAATCAGATCTGGTAATAAAAACGCCGATCTGAATACTGA
. : . : . : . : . : . :
JMFF046A17+ GAGGAGAGTAGAGGCGCTGCCACGCTGAGGGCTGAGACGGTGTTGCCGGTGTTCCTGCTG
JMSF049J09+ GAGGAGAGTAGAGGCGCTGCCACGCTGAGGGCTGAGACGGTGTTGCCGGTGTTCCTGCTG
JMSF013D10+ GAGGAGAGTAGAGGCGCTGCCACGCTGAGGGCTGAGACGGTGTTGCCGGTGTTCCTGCTG
JMSF039F01+ GAGGAGAGTAGAGGCGCTGCCACGCTGAGGGCTGAGACGGTGTTGCCGGTGTTCCTGCTG
JMFS118D11+ GAGGAGAGTAGAGGCGCTGCCACGCTGAGGGCTGAGACGGTGTTGCCGGTGTTCCTGCTG
JMSF030I22+ GAGGAGAGTAGAGGCGCTGCCACGCTGAGGGCTGAGACGGTGTTGCCGGTGTTCCTGCTG
____________________________________________________________
consensus GAGGAGAGTAGAGGCGCTGCCACGCTGAGGGCTGAGACGGTGTTGCCGGTGTTCCTGCTG
. : . : . : . : . : . :
JMFF046A17+ ACCGGCGGGCGGCGGCTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGACAC
JMSF049J09+ ACCGGCGGGCGGCGGCTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGACAC
JMSF013D10+ ACCGGCGGGCGGCGGCTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGACAC
JMSF039F01+ ACCGGCGGGCGGCGGCTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGACAC
JMFS118D11+ ACCGGCGGGCGGCGGCTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGACAC
JMSF030I22+ ACCGGCGGGCGGCGGCTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGACAC
____________________________________________________________
consensus ACCGGCGGGCGGCGGCTGAGGGCTGAGGGGGTTACGGCGGTAAGGCGGCGAGCCGGACAC
. : . : . : . : . : . :
JMFF046A17+ GGTGAAGTA
JMSF049J09+ GGTGAAGTAGCGACTCCAGAGGCCCTGCGTGAACTGCTATCTAAATGTAAAATAATACC
JMSF013D10+ GGTGAAGTAGCGACTCCAGAGGCCCTGCGTGAACTGCTATCTAAATGTAAAATAATACC
JMSF039F01+ GGTGAAGTAGCGACTCCAGAGGCCCTGCGTGAACTGCTATCTAAATGTAAAATAATACC
JMFS118D11+ GGTGAAGTAGCGACTCCAGAGGCCCTGCGTGAA
JMSF030I22+ GGTGAAGTAGCGACTCCAGAGGCCCTGCGTGAACTGCTATCTAAATGTAAAATAATACCT
____________________________________________________________
consensus GGTGAAGTAGCGACTCCAGAGGCCCTGCGTGAACTGCTATCTAAATGTAAAATAATACCT