Contig 005152:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF030E10-                                                          CAGATATTTTTT
                      ____________________________________________________________
consensus                                                             CAGATATTTTTT
 
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rJMSF030E10-          TTNTAAAAAAAAAATAAAAACTTTGTAAATTTACATTATAATTACATTACAAAAATAGAA
                      ____________________________________________________________
consensus             TTNTAAAAAAAAAATAAAAACTTTGTAAATTTACATTATAATTACATTACAAAAATAGAA
 
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rJMSF030E10-          AATAAAAATAGAGGGGGAGTCCACTACTGTCCACCGCTTCACGAAGCAAATGGTCAGTTT
                      ____________________________________________________________
consensus             AATAAAAATAGAGGGGGAGTCCACTACTGTCCACCGCTTCACGAAGCAAATGGTCAGTTT
 
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rJMSF030E10-          TCAGTTTCAAGAATCAACGATGACGTACGAGATGGAGCTGTAATCTAATANAACGGCACT
                      ____________________________________________________________
consensus             TCAGTTTCAAGAATCAACGATGACGTACGAGATGGAGCTGTAATCTAATANAACGGCACT
 
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rJMSF030E10-          GCTTCAACCCCACAAAGCGGTTTGGGTGGCATTTGCGGCGGCGGGGGCGGCGGCTTCTGC
                      ____________________________________________________________
consensus             GCTTCAACCCCACAAAGCGGTTTGGGTGGCATTTGCGGCGGCGGGGGCGGCGGCTTCTGC
 
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rJMSF030E10-          ACTTCCACAACCACGGCCTTCCCGGGCCGCGGCGGCTGACACGGACACGCCATTGCCAGG
                      ____________________________________________________________
consensus             ACTTCCACAACCACGGCCTTCCCGGGCCGCGGCGGCTGACACGGACACGCCATTGCCAGG
 
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rJMSF030E10-          AACTTAGGTACTTCATCACCGGGCATTATCACCGGCAAAGTCTGCCTATGATTCTCCTTC
                      ____________________________________________________________
consensus             AACTTAGGTACTTCATCACCGGGCATTATCACCGGCAAAGTCTGCCTATGATTCTCCTTC
 
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rJMSF030E10-          GAATTCTGGGGAAGGTGTTTAGGTTTATGGGGGCCGTAGCCGGCGGCGGAAGCCTCGAGA
                      ____________________________________________________________
consensus             GAATTCTGGGGAAGGTGTTTAGGTTTATGGGGGCCGTAGCCGGCGGCGGAAGCCTCGAGA
 
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rJMSF030E10-          TCGGCGGCGTTAGAGAAATGANAGCGTCGGCGGAAGGATCGGAGTTTGTCCCAGTGGTAA
JMSF004L04+                                         CGGAAGGATCGGAGTTTGTCCCAGTGGTAA
JMSF030E10+                                         CGGAAGGATCGGAGTTTGTCCCAGTGGTAA
                      ____________________________________________________________
consensus             TCGGCGGCGTTAGAGAAATGANAGCGTCGGCGGAAGGATCGGAGTTTGTCCCAGTGGTAA
 
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rJMSF030E10-          CAGCAGGANAAGATGCCGCTCAAGCTGAAAATTAGAATCAAGAGCAGCGCCGTGCCGAGA
JMSF004L04+           CAGCAGGAGAAGATGCCGCTCAAGCTGAAAATTAGAATCAAGAGCAGCGCCGTGCCGAGA
JMSF030E10+           CAGCAGGAGAAGATGCCGCTCAAGCTGAAAATTAGAATCAAGAGCAGCGCCGTGCCGAGA
                      ____________________________________________________________
consensus             CAGCAGGAGAAGATGCCGCTCAAGCTGAAAATTAGAATCAAGAGCAGCGCCGTGCCGAGA
 
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rJMSF030E10-          GGGAATCCCATGGACGGCCGANACGC                                  
JMSF004L04+           GGGAATCCCATGGACGGCCGAGACGCGACGGTGTGAGGTGGCGCGTAATACGAACTCTCC
JMSF030E10+           GGGAATCCCATGGACGGCCGAGACGCGACGGTGTGAGGTGGCGCGTAATACGAACTCTCC
                      ____________________________________________________________
consensus             GGGAATCCCATGGACGGCCGAGACGCGACGGTGTGAGGTGGCGCGTAATACGAACTCTCC
 
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JMSF004L04+           ATAAATATCGGTGGCATAAAAGTTCCTCCAAGCTGATGTTGACGCCGCTACTCCCCTCAT
JMSF030E10+           ATAAATATCGGTGGCATAAAAGTTCCTCCAAGCTGATGTTGACGCCGCTACTCCCCTCAT
                      ____________________________________________________________
consensus             ATAAATATCGGTGGCATAAAAGTTCCTCCAAGCTGATGTTGACGCCGCTACTCCCCTCAT
 
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JMSF004L04+           CAAAGGGTTTAACAGCAGCTAAAAATGGAAAAAGAACAAAAAAATATCTGAATAAAATGG
JMSF030E10+           CAAAGGGTTTAACAGCAGCTAAAAATGGAAAAAGAACAAAAAAATATCTGAATAAAATGG
                      ____________________________________________________________
consensus             CAAAGGGTTTAACAGCAGCTAAAAATGGAAAAAGAACAAAAAAATATCTGAATAAAATGG
 
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JMSF004L04+           AAAAAATTAGATATAAAGATGATAGTAGGGCGAGTGTTACTGAGATTTATAGAA      
JMSF030E10+           AAAAAATTAGATATAAAGATGATAGTAGGGCGAGTGTTACTGAGATTTATAGAACAGAGA
                      ____________________________________________________________
consensus             AAAAAATTAGATATAAAGATGATAGTAGGGCGAGTGTTACTGAGATTTATAGAACAGAGA
 
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JMSF030E10+           AGAAGAAAGAAAGAATGGAGGGAGGGGTACTCATAATTTATAAAGATATGATGATCGGCC
                      ____________________________________________________________
consensus             AGAAGAAAGAAAGAATGGAGGGAGGGGTACTCATAATTTATAAAGATATGATGATCGGCC