Contig 005145:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029N03Sequence630005145 (2)ref|XP_006341034.1|6e-43PREDICTED: uncharacterized protein LOC102578265 isoform X1 [Solanum tuberosum] 667005145 (2)ref|XP_006341034.1|8e-101PREDICTED: uncharacterized protein LOC102578265 isoform X1 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF029N03- CTTGGATACAACAGGAATTAAAGTAAGACTGTTTAGTGTGCAAATAATAATGAAGTT
                      ____________________________________________________________
consensus CTTGGATACAACAGGAATTAAAGTAAGACTGTTTAGTGTGCAAATAATAATGAAGTT
 
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rJMSF029N03- AAGAGGCTCATGAGCCAGGAGCCTATGATTTCTAGGTTCACACAGATTAGTCACAACAGC
                      ____________________________________________________________
consensus AAGAGGCTCATGAGCCAGGAGCCTATGATTTCTAGGTTCACACAGATTAGTCACAACAGC
 
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rJMSF029N03- AGTAATCACTCTGGGAAAAACACAAATTCTTACTTATGAGAATGGCTGGCACCAGGTCGA
                      ____________________________________________________________
consensus AGTAATCACTCTGGGAAAAACACAAATTCTTACTTATGAGAATGGCTGGCACCAGGTCGA
 
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rJMSF029N03- TACTCTCCAATTCCAAGCAGATCCTGGCAAGCTTTGTTTTTGGCCCTGGTTTCTGCTGTA
                      ____________________________________________________________
consensus TACTCTCCAATTCCAAGCAGATCCTGGCAAGCTTTGTTTTTGGCCCTGGTTTCTGCTGTA
 
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rJMSF029N03- CTAGGAATGTCATGATTCGGTTTCATAAATCTTTTCTCACGCCGCTCACATGAACCCCAT
                      ____________________________________________________________
consensus CTAGGAATGTCATGATTCGGTTTCATAAATCTTTTCTCACGCCGCTCACATGAACCCCAT
 
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rJMSF029N03- CCATCTGAAAACCTACCACCCTGCATATATGCCCGAACCACAAATTCAGCTCGCAGAACA
                      ____________________________________________________________
consensus CCATCTGAAAACCTACCACCCTGCATATATGCCCGAACCACAAATTCAGCTCGCAGAACA
 
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rJMSF029N03- TTACGGTTATCATCAAATTCAATGGTCTTGTCTTTAATTTCATATGACAGGTTGAAGTAA
                      ____________________________________________________________
consensus TTACGGTTATCATCAAATTCAATGGTCTTGTCTTTAATTTCATATGACAGGTTGAAGTAA
 
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rJMSF029N03- AACGATATTTTCCTCCATCCTGATTTTTTAATGAAAGGGCTTCCTGAAATCATTGTGTAA
JMSF029N03+ ATGAAAGGGCTTCCTGAAATCATTGTGTAA
                      ____________________________________________________________
consensus AACGATATTTTCCTCCATCCTGATTTTTTAATGAAAGGGCTTCCTGAAATCATTGTGTAA
 
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rJMSF029N03- TCACTTTTCTCCAAAATCGCCATTGCTGCATCTTGGTACTCCTTGAAAAGCGACACAGAT
JMSF029N03+ TCACTTTTCTCCAAAATCGCCATTGCTGCATCTTGGTACTCCTTGAAAAGCGACACAGAT
                      ____________________________________________________________
consensus TCACTTTTCTCCAAAATCGCCATTGCTGCATCTTGGTACTCCTTGAAAAGCGACACAGAT
 
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rJMSF029N03- GGAAACTGACCGGACAAGCTATGTCTAACTATTCCACCTCTCTCATCACACCTTCCATTG
JMSF029N03+ GGAAACTGACCGGACAAGCTATGTCTAACTATTCCACCTCTCTCATCACACCTTCCATTG
                      ____________________________________________________________
consensus GGAAACTGACCGGACAAGCTATGTCTAACTATTCCACCTCTCTCATCACACCTTCCATTG
 
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rJMSF029N03- CTCATCGTCGTCATCGGAGAACACTCCGAACCACTGGGACTATTATTACGGTAACCGTAT
JMSF029N03+ CTCATCGTCGTCATCGGAGAACACTCCGAACCACTGGGACTATTATTACGGTAACCGTAT
                      ____________________________________________________________
consensus CTCATCGTCGTCATCGGAGAACACTCCGAACCACTGGGACTATTATTACGGTAACCGTAT
 
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rJMSF029N03- TCCGTCACGG
JMSF029N03+ TCCGTCACGGAAGACCTTGTTTCCGGCGGCGAAGAATAAACCGGCGTATTCGCTGTGCGC
                      ____________________________________________________________
consensus TCCGTCACGGAAGACCTTGTTTCCGGCGGCGAAGAATAAACCGGCGTATTCGCTGTGCGC
 
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JMSF029N03+ GGCATGTGCTTCACCAATGCCATAGGCGGCGTAGCTTCCTCGCTCAGACACGAAGAGGCC
                      ____________________________________________________________
consensus GGCATGTGCTTCACCAATGCCATAGGCGGCGTAGCTTCCTCGCTCAGACACGAAGAGGCC
 
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JMSF029N03+ GGCCCCCTTGCTATCTTCTTCGAGTCTCGATTGAGGACCTCGCCGTCGGGGTGAGGGTGC
                      ____________________________________________________________
consensus GGCCCCCTTGCTATCTTCTTCGAGTCTCGATTGAGGACCTCGCCGTCGGGGTGAGGGTGC
 
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JMSF029N03+ TTTCTAGGGTTTCTGGAGAGCTTCGTTTGGGGAGAGGGGATAGGGAAAGGGACAGTGGGA
                      ____________________________________________________________
consensus TTTCTAGGGTTTCTGGAGAGCTTCGTTTGGGGAGAGGGGATAGGGAAAGGGACAGTGGGA
 
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JMSF029N03+ GAGTGCTTGACAGGAGGAGGTCTACAGTGCTTAACTGTGGCAAGGGTGGTTGTTCTGGAG
                      ____________________________________________________________
consensus GAGTGCTTGACAGGAGGAGGTCTACAGTGCTTAACTGTGGCAAGGGTGGTTGTTCTGGAG
 
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JMSF029N03+ GAGATGGAGGCTGCGGCGGCGGAATCGATCACCGCCCACAAGGCGGCGTCGTCGAGGTCA
                      ____________________________________________________________
consensus GAGATGGAGGCTGCGGCGGCGGAATCGATCACCGCCCACAAGGCGGCGTCGTCGAGGTCA
 
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JMSF029N03+ TTGTCGTCGACGGCGTAGGTGAATGGAGAATTCATTGTACAGTGAGGAGTGAGACGATTC
                      ____________________________________________________________
consensus TTGTCGTCGACGGCGTAGGTGAATGGAGAATTCATTGTACAGTGAGGAGTGAGACGATTC