Contig 005137:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN046K18Sequence619005137 (2)emb|CDP12697.1|1e-75unnamed protein product [Coffea canephora]
JMSF029A12Sequence624005137 (2)emb|CDP20450.1|2e-70unnamed protein product [Coffea canephora]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+                                                            TGAAGCAAAAT
                      ____________________________________________________________
consensus                                                              TGAAGCAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           GTCCACCAAGTCTAACCCATCTGCCTCCATTTTCTTCACATGCGAGTGCTCTTCAACTAC
                      ____________________________________________________________
consensus             GTCCACCAAGTCTAACCCATCTGCCTCCATTTTCTTCACATGCGAGTGCTCTTCAACTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           ACACTCAAAGAATTCATCCAATTCTTTACCCAATTTCTCCACCCTTCTATCAAAACCATT
                      ____________________________________________________________
consensus             ACACTCAAAGAATTCATCCAATTCTTTACCCAATTTCTCCACCCTTCTATCAAAACCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           GATTCTATTCACCCATGCAAGCCAAGGGATGTAATCCCCTATATCAAACATTCCCAGCAT
                      ____________________________________________________________
consensus             GATTCTATTCACCCATGCAAGCCAAGGGATGTAATCCCCTATATCAAACATTCCCAGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           TTCAAAAACATCCTCCAACAAAGATTTGATACCCCTAACGCCATTTTTCCGGTGCTCATT
                      ____________________________________________________________
consensus             TTCAAAAACATCCTCCAACAAAGATTTGATACCCCTAACGCCATTTTTCCGGTGCTCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           ACTGTACTTCCTCCCTATCGTCACCCTACAAACTATATCATTCGTCAGCTCAATGAAAAT
                      ____________________________________________________________
consensus             ACTGTACTTCCTCCCTATCGTCACCCTACAAACTATATCATTCGTCAGCTCAATGAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           ATTGCTCAAATTTATCACAGAACCGCATGATTGTCTGATCTTTTCCACCATAAATCTTGT
JMSF029A12+                              GAACCGCATGNTTGTTTGATCTTTTGGACCATCAATTGTGT
                      ____________________________________________________________
consensus             ATTGCTCAAATTTATCACAGAACCGCATGATTGTTTGATCTTTTGGACCATCAATTTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           TTCCTCTTCTCTAACTTTGCGAAATGACTGCACCCTCTTGCTGCTAAGAAGATGGAGCAC
JMSF029A12+           TTCCTCTTCTCTGACGTTGCGAAAGGACTGCACCCTCTTGTTGCTAAGAAGGTGGAGCAC
                      ____________________________________________________________
consensus             TTCCTCTTCTCTGACTTTGCGAAATGACTGCACCCTCTTGTTGCTAAGAAGGTGGAGCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           ACAAATGCTTCGCACTTGTCGCCAATACTCGCCGTAGGGGGCGAAGGCAACATCCTTGGA
JMSF029A12+           ACAAATGCTTCGCACTNGTCGCCAATACTCGCCGTAGGGGGCAAAGGCAACGTCCTTGGC
                      ____________________________________________________________
consensus             ACAAATGCTTCGCACTTGTCGCCAATACTCGCCGTAGGGGGCGAAGGCAACGTCCTTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           GCCGTAGAACAGGCGGTCAGTAATGGTGGATTTGGGGCGGTCGGAGAAGATTAAGTCGTG
JMSF029A12+           GCCNTATAACAGACGGTCGGTAATGCTGGATTTGGGGCGGTCGGAGAAGATCAAGTCGTG
                      ____________________________________________________________
consensus             GCCGTATAACAGGCGGTCGGTAATGGTGGATTTGGGGCGGTCGGAGAAGATTAAGTCGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           GTCTTTCATGATCTCTCTAGCGGCGGCAGAGGAGGAAGCGACGAGGACCGGCACGGAACC
JMSF029A12+           GTCTTTCATGATCTCTCTGGCGGCGTCAGAAGAGGAAGCCACGAGGACCGGCACGGAACC
                      ____________________________________________________________
consensus             GTCTTTCATGATCTCTCTGGCGGCGTCAGAGGAGGAAGCGACGAGGACCGGCACGGAACC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN046K18+           GAATTGAA                                                    
JMSF029A12+           GAATTGAAGTAGCATGAGCGGACCATANTGCTTTGATAATTGGTGGAGGTGGCGATGAGG
                      ____________________________________________________________
consensus             GAATTGAAGTAGCATGAGCGGACCATANTGCTTTGATAATTGGTGGAGGTGGCGATGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029A12+           GTGGGAGCCAAGTTGGAGGATGTGTCCTAGGAATGGAAGCTTTGGGGGCGATGGTGGTGA
                      ____________________________________________________________
consensus             GTGGGAGCCAAGTTGGAGGATGTGTCCTAGGAATGGAAGCTTTGGGGGCGATGGTGGTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029A12+           GTTTTTTGTGTCTCTGGGAGATGAGAATAGCAATTTGTAGAGGAAGAAAATGAAAATAAA
                      ____________________________________________________________
consensus             GTTTTTTGTGTCTCTGGGAGATGAGAATAGCAATTTGTAGAGGAAGAAAATGAAAATAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029A12+           CAAAGGGAAAAGGGAATAATAATNCATGAAGAGATTCATCTCGATCGATAGTTCGGTTCC
                      ____________________________________________________________
consensus             CAAAGGGAAAAGGGAATAATAATNCATGAAGAGATTCATCTCGATCGATAGTTCGGTTCC