Contig 005129:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+                                   TCTNTGATCATACGCGCTCCNATGGAGCCANTGTAG
                      ____________________________________________________________
consensus                                     TCTNTGATCATACGCGCTCCNATGGAGCCANTGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           AATGCAGCCACGCCCAGTTTAGAAATGATTCTCAGTGTTTTTGCCAGCTTTTTGTTGCGA
                      ____________________________________________________________
consensus             AATGCAGCCACGCCCAGTTTAGAAATGATTCTCAGTGTTTTTGCCAGCTTTTTGTTGCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           CAGATATCCCCGGCCTGCAAAAGCTTCCCTTCCGGCGCAAAAATCCGTTTCAGTCCCGAA
JMSF028C01+                                                                  CCGAA
                      ____________________________________________________________
consensus             CAGATATCCCCGGCCTGCAAAAGCTTCCCTTCCGGCGCAAAAATCCGTTTCAGTCCCGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           TCCGCCATTATTAGAGCTTCTGTTGATTCCATCTGCATCCTCAGATATTTGGATATCGCG
JMSF028C01+           TCCGCCATTATTAGAGCTTCTGTTGATTCCATCTGCATCCTCAGATATTTGGATATCGCG
                      ____________________________________________________________
consensus             TCCGCCATTATTAGAGCTTCTGTTGATTCCATCTGCATCCTCAGATATTTGGATATCGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           AATCCTTTTCGTGCGAGCCTTTCTGCCGGCCTCACCAGCCTTTTCCAGGGAAGGTTGCCG
JMSF028C01+           AATCCTTTTCGTGCGAGCCTTTCTGCCGGCCTCACCAGCCTTTTCCAGGGAAGGTTGCCG
                      ____________________________________________________________
consensus             AATCCTTTTCGTGCGAGCCTTTCTGCCGGCCTCACCAGCCTTTTCCAGGGAAGGTTGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           TACTTTCCCCATGCTTCATATAGGCCTGCAAGCTCCCCGGGAGTAGCAATGGATAACGCC
JMSF028C01+           TACTTTCCCCATGCTTCATATAGGCCTGCAAGCTCCCCGGGAGTAGCAATGGATAACGCC
                      ____________________________________________________________
consensus             TACTTTCCCCATGCTTCATATAGGCCTGCAAGCTCCCCGGGAGTAGCAATGGATAACGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           CCCCTCGCTTTAGCGTCTGGATTTTTTGCGTACATATTCTGGGAAGCACGATTGGGAGCA
JMSF028C01+           CCCCTCGCTTTAGCGTCTGGATTTTTTGCGTACATATTCTGGGAAGCACGATTGGGAGCA
                      ____________________________________________________________
consensus             CCCCTCGCTTTAGCGTCTGGATTTTTTGCGTACATATTCTGGGAAGCACGATTGGGAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           GTCTCTCTCATGTCAAAGGCTTTGACCTCGGCGCCGTCGGCCGACCTAAGCAGCATGAAC
JMSF028C01+           GTCTCTCTCATGTCAAAGGCTTTGACCTCGGCGCCGTCGGCCGACCTAAGCAGCATGAAC
                      ____________________________________________________________
consensus             GTCTCTCTCATGTCAAAGGCTTTGACCTCGGCGCCGTCGGCCGACCTAAGCAGCATGAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           GCGCCGCCACCAATACCACTGGACGCGGGGCTCACAACACCCAAGCAAAGAGCAGCAGCC
JMSF028C01+           GCGCCGCCACCAATACCACTGGACGCGGGGCTCACAACACCCAAGCAAAGAGCAGCAGCC
                      ____________________________________________________________
consensus             GCGCCGCCACCAATACCACTGGACGCGGGGCTCACAACACCCAAGCAAAGAGCAGCAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           ACCGCTGCATCAACGGCATGACCTCCGTCAACCAACACATCTCTCCCAATTCTGGAGCAT
JMSF028C01+           ACCGCTGCATTAACGGCATGACCTCCGTCAACCAACACATCTCTCCCAATTCTGGAGCAT
                      ____________________________________________________________
consensus             ACCGCTGCATTAACGGCATGACCTCCGTCAACCAACACATCTCTCCCAATTCTGGAGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           CTCCGATCATCAGTCGCCACAACGCCGTGCCGCGCCCTAGTTATCTCGCGCCGGGGCGGC
JMSF028C01+           CTCCGATCATCAGTCGCCACAACGCCGTGCCGCGCCCTAGTTATCTCGCGCCGGGGCGGC
                      ____________________________________________________________
consensus             CTCCGATCATCAGTCGCCACAACGCCGTGCCGCGCCCTAGTTATCTCGCGCCGGGGCGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027H09+           GTTTCCTCTGCGTACGACAGCAGAGGCTGAGGCCAGGT                      
JMSF028C01+           GTTTCCTCTGCGTACGACAGCAGAGGCTGAGGCCAGGTGCCTACAACTACAAGGATCCAC
                      ____________________________________________________________
consensus             GTTTCCTCTGCGTACGACAGCAGAGGCTGAGGCCAGGTGCCTACAACTACAAGGATCCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF028C01+           CACAGGAATAGAGCTGCAAAGTTACGTGACATGTTTTTGCAGCTAAGTCAAAGACCAACA
                      ____________________________________________________________
consensus             CACAGGAATAGAGCTGCAAAGTTACGTGACATGTTTTTGCAGCTAAGTCAAAGACCAACA