Contig 005127:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035K05Sequence589005127 (4)291004342 (3)
JMFS147E11Sequence627005127 (4)
JMSF027M04Sequence545005127 (4)552004342 (3)
JMSF039J15Sequence665005127 (4)755004342 (3)ref|XP_009617642.1|4e-18PREDICTED: uncharacterized protein LOC104109944 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF039J15+ TTAAG
                      ____________________________________________________________
consensus TTAAG
 
. : . : . : . : . : . :
JMFS147E11+ ATGAGGTCCCGGCCTGACTAATCCCGGG
JMFF035K05+ GTATCAATAAGAAATGAAGGTGATGAGGTCCCGGCCTGACTAATCCCGGG
JMSF039J15+ CCCCGGCACCGTATCAATAAGAAATGAAGGTGATGAGGTCCCGGCCTGACTAATCCCGGG
                      ____________________________________________________________
consensus CCCCGGCACCGTATCAATAAGAAATGAAGGTGATGAGGTCCCGGCCTGACTAATCCCGGG
 
. : . : . : . : . : . :
JMFS147E11+ ATTATTGTTACTGTTGGTAATTATATTTGGATTCCCAGAAAACATCACCCCTCCTCCTCC
JMFF035K05+ ATTATTGTTACTGTTGGTAATTATATTTGGATTCCCAGAAAACATCACCCCTCCTCCTCC
JMSF039J15+ ATTATTGTTACTGTTGGTAATTATATTTGGATTCCCAGAAAACATCACCCCTCCTCCTCC
JMSF027M04+ CCTCC
                      ____________________________________________________________
consensus ATTATTGTTACTGTTGGTAATTATATTTGGATTCCCAGAAAACATCACCCCTCCTCCTCC
 
. : . : . : . : . : . :
JMFS147E11+ TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
JMFF035K05+ TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
JMSF039J15+ TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
JMSF027M04+ TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
                      ____________________________________________________________
consensus TGATAAACCACTAGCACTGTTGCTATTATTTACATTTACATTTACCCCGAGATGACCATA
 
. : . : . : . : . : . :
JMFS147E11+ AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
JMFF035K05+ AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
JMSF039J15+ AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
JMSF027M04+ AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
                      ____________________________________________________________
consensus AAAGTTACCAATCGGAATCATCTCCGACGACACCCCCGACTGAAAAGACCAGGCTTGCTG
 
. : . : . : . : . : . :
JMFS147E11+ TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
JMFF035K05+ TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
JMSF039J15+ TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
JMSF027M04+ TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
                      ____________________________________________________________
consensus TTGATGAAACCCCATGTTCGATTCTGCCGCCATTTCTATATCCTCAACTACTCCTACTAT
 
. : . : . : . : . : . :
JMFS147E11+ CCCCAAATTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
JMFF035K05+ CCCCAAGTTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
JMSF039J15+ CCCCAAATTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
JMSF027M04+ CCCCAAATTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
                      ____________________________________________________________
consensus CCCCAAATTACAACAGCAAACAACTAGAAGCTATAGCATAAGCTCCCAACTTGCAAAAAC
 
. : . : . : . : . : . :
JMFS147E11+ AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
JMFF035K05+ AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
JMSF039J15+ AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
JMSF027M04+ AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
                      ____________________________________________________________
consensus AAAAAATCAAAATCAAAAACAAAAACTCTAAATTCCTCAGCTCTCAGCTCCCTTAAACCC
 
. : . : . : . : . : . :
JMFS147E11+ AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
JMFF035K05+ AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
JMSF039J15+ AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
JMSF027M04+ AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
                      ____________________________________________________________
consensus AAAAAAGGACTCCTATCCAACTCCTAATACCAACGCGTGAAATTAACGAACAAAAACAGA
 
. : . : . : . : . : . :
JMFS147E11+ GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
JMFF035K05+ GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
JMSF039J15+ GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
JMSF027M04+ GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
                      ____________________________________________________________
consensus GCATTCTCCGAGTAAAATTTGAGCAAATATCAAGTTGAATCTCCAGGTTCAAATTACACT
 
. : . : . : . : . : . :
JMFS147E11+ GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCTG
JMFF035K05+ GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCT
JMSF039J15+ GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCTG
JMSF027M04+ GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCTG
                      ____________________________________________________________
consensus GAAGTGCAATTTTTCCCCGTCATTGAATCACAGAATAGATATGAAAAAAACCCTAACCTG
 
. : . : . : . : . : . :
JMFS147E11+ CAAGAATCGAAAAATAGCAGCAGTAATTAGAAGAGTATTGGGATAGAAAGTGGAGTT
JMSF039J15+ CAAGAATCGAAAAATAGCAGCAGTAATTAGAAGAGTATTGGGATAGAAAGTGGAGTT
JMSF027M04+ CAAGAATCGAAAAATAGCAGCAGTAATTAGAAGAGTATTGGGATAGAAAGTGGAGTTACC
                      ____________________________________________________________
consensus CAAGAATCGAAAAATAGCAGCAGTAATTAGAAGAGTATTGGGATAGAAAGTGGAGTTACC