| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN018A13 | Sequence | 610 | 005123 (8) | ref|XP_011077578.1| | 3e-19 | PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic [Sesamum indicum] | |||||
| JMFN029N15 | Sequence | 517 | 005123 (8) | ref|XP_011077578.1| | 3e-22 | PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic [Sesamum indicum] | |||||
| JMSF006D24 | Sequence | 384 | 005123 (8) | ref|XP_009599675.1| | 4e-10 | PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Ni | |||||
| JMSF007H19 | Sequence | 369 | 011910 (2) | 483 | 005123 (8) | emb|CDP06507.1| | 1e-81 | unnamed protein product [Coffea canephora] | |||
| JMSF027H18 | Sequence | 640 | 005123 (8) | ref|XP_006364559.1| | 4e-53 | PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [So | 696 | 005123 (8) | emb|CDP06507.1| | 2e-105 | unnamed protein product [Coffea canephora] |
| JMSF038O06 | Sequence | 617 | 005123 (8) | ref|XP_006364559.1| | 5e-57 | PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [So | 932 | 005123 (8) | ref|XP_006465881.1| | 4e-111 | PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 [Ci |
This contig is upended
. : . : . : . : . : . :
JMFN018A13+ GTCAAGGTCACTAAGCTCTGCCATGGCGGCGACCTCT
____________________________________________________________
consensus GTCAAGGTCACTAAGCTCTGCCATGGCGGCGACCTCT
. : . : . : . : . : . :
JMFN018A13+ ACGAGAGGGTGTCGCGGGGGCCGCTGTCAGAGACCGCAGCTGCTGTCGTTTTCGGGCTCC
____________________________________________________________
consensus ACGAGAGGGTGTCGCGGGGGCCGCTGTCAGAGACCGCAGCTGCTGTCGTTTTCGGGCTCC
. : . : . : . : . : . :
JMFN018A13+ AATTGATTGCCGGTGAAGAGGGAGCACAACTGCGCCGCCTTCTGCCACCACTGCCCGCCG
____________________________________________________________
consensus AATTGATTGCCGGTGAAGAGGGAGCACAACTGCGCCGCCTTCTGCCACCACTGCCCGCCG
. : . : . : . : . : . :
JMFN018A13+ GAACTGAAAATTGTCGGTGACGATTAGGTCGCCGGAATTTGGAGAATCATCGACAAGGCT
____________________________________________________________
consensus GAACTGAAAATTGTCGGTGACGATTAGGTCGCCGGAATTTGGAGAATCATCGACAAGGCT
. : . : . : . : . : . :
JMFN029N15+ CCTCGAAATATATTGATCGTAGTACTTTGCAGCTCGCTCCAGATCACCAAGCTC
JMFN018A13+ TCAGGTCCTCGAAATATATTGATCGTAGTACTTTGCAGCTCGCTCCAGATCACCAAGCTC
rJMSF027H18- CCTCGAAATATATTGATCGTAGTACTTTGCAGCTCGTTCCAGATCACCAAGCTC
rJMSF007H19- TTGATCGTAGTACTTTGCAGCTCGTTCCAGATCACCAAGCTC
rJMSF038O06- CCTCGAAATATATTGATCGTAGTACTTTGCAGCTCGTTCCAGATCACCAAGCTC
____________________________________________________________
consensus TCAGGTCCTCGAAATATATTGATCGTAGTACTTTGCAGCTCGTTCCAGATCACCAAGCTC
. : . : . : . : . : . :
JMFN029N15+ GGTGTAGCAGTCAGCTATTGCTCCATAAGCTTCGGTATTCCCAAAGTCCTCTTTCTCTCG
JMFN018A13+ GGTGTAGCAGTCAGCTATTGCTCCATAAGCTTCGGTATTCCCAAAGTCCTCTTTCTCTCG
rJMSF027H18- GGTATAGCAGTCAGCTATTGCTCCATAAGCTTCGGTACTCCTAGAGTCCTCTTTCTCTCG
rJMSF007H19- GGTATAGCAGTCAGCNATTGCTCCATAAGCTTCGGTACTCCCAGAGTCCTCTTTCTCTCG
rJMSF038O06- GGTATAGCAGTCAGCTATTGCTCCATAAGCTTCGGTACTCCCAGAGTCCTCTTTCTCTCG
____________________________________________________________
consensus GGTATAGCAGTCAGCTATTGCTCCATAAGCTTCGGTACTCCCAGAGTCCTCTTTCTCTCG
. : . : . : . : . : . :
JMFN029N15+ TTCTAAAATGTTGAGAACCATATAATGGTATTTGATGGCTTCCC
JMFN018A13+ TTCTAAAATGTTGAGAACCATATAATGGTATTTGATGGCTTCCC
rJMSF027H18- TTCTGAAATGTCGAGAACCATAGAATGGTATTTGATGGCTTCCCGATACTTTCCCTGCCT
rJMSF007H19- NTCTGAAATGTCNAGAACCATAGAATGGTATTTGATGGCTTCCCGATACTTTCCCTGCCT
rJMSF038O06- TTCTGAAATGTCGAGAACCATAGAATGGTATTTGATGGCTTCCCGATACTTTCCCTGCCT
____________________________________________________________
consensus TTCTGAAATGTCGAGAACCATAGAATGGTATTTGATGGCTTCCCGATACTTTCCCTGCCT
. : . : . : . : . : . :
rJMSF027H18- TTGCAGTGATGCACCTAAACCCCTCGCAGCCTTCTTCTCCTCTATTGAATCTTTAAGATC
rJMSF007H19- TTGCAGTGATGCACCTAAACCCCTCGCAGCCTTCTTCTCCTCTATTGAATCTTTAAGANC
rJMSF038O06- TTGCAGTGATGCACCTAAACCCCTCGCAGCCTTCTTCTCCTCTATTGAATCTTTAAGATC
____________________________________________________________
consensus TTGCAGTGATGCACCTAAACCCCTCGCAGCCTTCTTCTCCTCTATTGAATCTTTAAGATC
. : . : . : . : . : . :
rJMSF027H18- TTTGGCAAGATCAAGGGCTTTCTTGAACTCCGAAAATGCTTGCTTTGGGCCTTGGTTTCT
rJMSF007H19- TTTGGCAAGATCAAGGGCTTTCTTGAACTCCGAAAATGCTTGCTTTGGGCCTTGGTTTCT
rJMSF038O06- TTTGGCAAGATCAAGGGCTTTCTTGAACTCCGAAAATGCTTGCTTTGGGCCTTGGTTTCT
JMSF038O06+ CT
____________________________________________________________
consensus TTTGGCAAGATCAAGGGCTTTCTTGAACTCCGAAAATGCTTGCTTTGGGCCTTGGTTTCT
. : . : . : . : . : . :
rJMSF027H18- CAAGAAACTCTTCCCGCTTCTAAGACAAGATATCAGCTGCTCTTTCCTCGGATCAACAAT
rJMSF007H19- CAAGAAACTCTTCCCGCTTCTAAGACAAGATATCAGCTGCTCTTTCCTCGGATCAACAAT
rJMSF038O06- CAAGAAACTCTTCCCGCTTCTAAGGCAAGATATCAGCTGCTCTTTCCTCGGATCAACAAT
JMSF038O06+ CAAGAAACTCTTCCCGCTTCTAAGGCAAGATATCAGCTGCTCTTTCCTCGGATCAACAAT
JMSF027H18+ TCTAAGACAAGATATCAGCTGCTCTTTCCTCGGATCAACAAT
____________________________________________________________
consensus CAAGAAACTCTTCCCGCTTCTAAGACAAGATATCAGCTGCTCTTTCCTCGGATCAACAAT
. : . : . : . : . : . :
rJMSF027H18- CACTTCGCTTTCTGGTATTCTTGCACCAGCTGGAGCGTAACTCAAGCTAGGTGCATAAGA
rJMSF007H19- CACTTCGCTTTCTGGTATTCTTGCACCAGCTGGAGCGTAACTCAAGCTAGGTGCATAAGA
rJMSF038O06- CACTTCGCTTTCTGGTATTCTTGCACCAGCTGGAGCGTAACTCAAGCTAGGTGCATAAGA
JMSF038O06+ CACTTCGCTTTCTGGTATTCTTGCACCAGCTGGAGCGTAACTCAAGCTAGGTGCATAAGA
JMSF027H18+ CACTTCGCTTTCTGGTATTCTTGCACCAGCTGGAGCGTAACTCAAGCTAGGTGCATAAGA
____________________________________________________________
consensus CACTTCGCTTTCTGGTATTCTTGCACCAGCTGGAGCGTAACTCAAGCTAGGTGCATAAGA
. : . : . : . : . : . :
rJMSF027H18- TTCAATTTTTGCTTGCCTTTTTAATGCTGCATTGATCTGAAGCAGCTGATCATTCAGCCG
rJMSF007H19- TTCAATTTTTGCTTGCCTTTTTAATGCTGCATTGATCTGAAGCAGCTGATCATTCAGCCG
rJMSF038O06- TTCAATTTTTGCTTGCCTTTTTAATGCTGCATTGATCTGAAGCAGCTGATCATTCAGCCG
JMSF038O06+ TTCAATTTTTGCTTGCCTTTTTAATGCTGCATTGATCTGAAGCAGCTGATCATTCAGCCG
JMSF027H18+ TTCAATTTTTGCTTGCCTTTTTAATGCTGCATTGATCTGAAGCAGCTGATCATTCAGCCG
____________________________________________________________
consensus TTCAATTTTTGCTTGCCTTTTTAATGCTGCATTGATCTGAAGCAGCTGATCATTCAGCCG
. : . : . : . : . : . :
rJMSF027H18- CTTCAGTTCTCCTTTCCTCTGGCGTGCAAGTAGCCCTCCAACTGTGGCCCCGATTAGGGA
rJMSF007H19- CTTCAGTTCTCCTTTCCTCTG
rJMSF038O06- CTTCAGTTCTCCTTTCCTCTGGCGTGCAAGTAGCCCTCCAACTGTGGCCCCGATTAGGGA
JMSF038O06+ CTTCAGTTCTCCTTTCCTCTGGCGTGCAAGTAGCCCTCCAACTGTGGCCCCGATTAGGGA
JMSF027H18+ CTTCAGTTCTCCTTTCCTCTGGCGTGCAAGTAGCCCTCCAACTGTGGCCCCGATTAGGGA
____________________________________________________________
consensus CTTCAGTTCTCCTTTCCTCTGGCGTGCAAGTAGCCCTCCAACTGTGGCCCCGATTAGGGA
. : . : . : . : . : . :
rJMSF027H18- TACAAAGAGCAGCAAGGGCATGCTAAAACCAGATTTTTCTACTTCACACGTTTCGGCCAG
rJMSF038O06- TACAAAGAGCAGCAAGGGCATGCTAAAACCAGATTTTTCTACTTCACACGTTTCGGCCAG
JMSF038O06+ TACAAAGAGCAGCAAGGGCATGCTAAAACCAGATTTTTCTACTTCACACGTTTCGGCCAG
JMSF006D24+ CATGCTAAAACCAGATTTTTCTACTTCACACGTTTCGGCCAG
JMSF027H18+ TACAAAGAGCAGCAAGGGCATGCTAAAACCAGATTTTTCTACTTCACACGTTTCGGCCAG
____________________________________________________________
consensus TACAAAGAGCAGCAAGGGCATGCTAAAACCAGATTTTTCTACTTCACACGTTTCGGCCAG
. : . : . : . : . : . :
rJMSF027H18- CGCTTCT
rJMSF038O06- CGCTTCTAGAGGTGTAACTATCATCAATGCATTAGCAACAAATCAGTGTTGCTGGGCGTA
JMSF038O06+ CGCTTCTAGAGGTGTAACTATCATCAATGCATTAGCAAC-AATCAGTGTTGCTGGGCGTA
JMSF006D24+ CGCTTCTAGAGGTGTAACTATCATCAATGCATTAGCAAC-AATCAGTGTTGCTGGGCGTA
JMSF027H18+ CGCTTCTAGAGGTGTAACTATCATCAATGCATTAGCAAC-AATCAGTGTTGCTGGGCGTA
____________________________________________________________
consensus CGCTTCTAGAGGTGTAACTATCATCAATGCATTAGCAAC-AATCAGTGTTGCTGGGCGTA
. : . : . : . : . : . :
rJMSF038O06- ACATAAATGGGAAATATTGNTTTGATTTCTACTGGTACCCATCCGGTAGATTTTTTGG
JMSF038O06+ ACATAAAT-GGAAATATTGTTTTGATTTCTACTGGTACCCATCCGGTAGATTTTTTGGAA
JMSF006D24+ ACATAAAT-GGAAATATTGTTTTGATTTCTACTGGTACCCATCCGGTAGATTTTTTGGAA
JMSF027H18+ ACATAAAT-GGAAATATTGTTTTGATTTCTACTGGTACCCATCCGGTAGATTTTTTGGAA
____________________________________________________________
consensus ACATAAAT-GGAAATATTGTTTTGATTTCTACTGGTACCCATCCGGTAGATTTTTTGGAA
. : . : . : . : . : . :
JMSF038O06+ TTTCTTTCCAATGCCATTCGCTGCTCATTCTTGAGCTGCCTATCGCTTAGAGAGGCGAGT
JMSF006D24+ TTTCTTTCCAATGCCATTCGCTGCTCATTCTTGAGCTGCCTATCGCTTAGAGAGGCGAGT
JMSF027H18+ TTTCTTTCCAATGCCATTCGCTGCTCATTCTTGAGCTGCCTATCGCTTAGAGAGGCGAGT
____________________________________________________________
consensus TTTCTTTCCAATGCCATTCGCTGCTCATTCTTGAGCTGCCTATCGCTTAGAGAGGCGAGT
. : . : . : . : . : . :
JMSF038O06+ GTTGCAGAGATGGTGAGCAAATTGGGTTTTGCAGTGTGGGTTTTGGGAATGGAAAAGGAA
JMSF006D24+ GTTGCAGAGATGGTGAGCAAATTGGGTTTTGCAGTGTGGGTTTTGGGAATGGAAAAGGAA
JMSF027H18+ GTTGCAGAGATGGTGAGCAAATTGGGTTTTGCAGTGTGGGTTTTGGGAATGGAAAAGGAA
____________________________________________________________
consensus GTTGCAGAGATGGTGAGCAAATTGGGTTTTGCAGTGTGGGTTTTGGGAATGGAAAAGGAA
. : . : . : . : . : . :
JMSF038O06+ GATGGAGAAGCAGCATGACGGCAAAGACTCCTCGGCAGAAGCCCTTGCTGCACCACCATG
JMSF006D24+ GATGGAGAAGCAGCATGACGGCAAAGACTCCTCGGCAGAAGCCCTTGCTGCACCACCATG
JMSF027H18+ GATGGAGAAGCAGCATGACGGCAAAGACTCCTCGGCAGAAGCCCTTGCTGCACCACCATG
____________________________________________________________
consensus GATGGAGAAGCAGCATGACGGCAAAGACTCCTCGGCAGAAGCCCTTGCTGCACCACCATG
. : . : . : . : . : . :
JMSF038O06+ ATCCTCATTGCTTCTC
JMSF006D24+ ATCCTCATTGCTTCTCTTCTTTTCGGTTTT
JMSF027H18+ ATCCTCATTGCTTCTCTTCTTTTCGGTTTTGGATTTCTGATAACATTTGGATAAAAGATC
____________________________________________________________
consensus ATCCTCATTGCTTCTCTTCTTTTCGGTTTTGGATTTCTGATAACATTTGGATAAAAGATC