Contig 005111:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019K24Sequence347005111 (9)234008475 (5)gb|KJB70541.1|4e-33hypothetical protein B456_011G079800 [Gossypium raimondii]
JMSF002H03Sequence338005111 (9)
JMSF013J01Sequence348005111 (9)322008475 (5)gb|KJB70541.1|2e-55hypothetical protein B456_011G079800 [Gossypium raimondii]
JMSF013J09Sequence350005111 (9)603008475 (5)gb|EYU21599.1|4e-81hypothetical protein MIMGU_mgv1a009096mg [Erythranthe guttata]
JMSF016L11Sequence348005111 (9)302005111 (9)
JMSF018J08Sequence231005111 (9)347008475 (5)ref|XP_011040004.1|3e-59PREDICTED: serine-threonine kinase receptor-associated protein [Populus euphrat
JMSF026A20Sequence347005111 (9)566008475 (5)gb|EYU21599.1|1e-64hypothetical protein MIMGU_mgv1a009096mg [Erythranthe guttata]
JMSF042G21Sequence347005111 (9)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF013J01+ TTTTTTTNTNATATATGCGGAACAACAATGAAAAATCTCGATTAGAAAT
JMFF019K24+ ATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
JMSF002H03+ ATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
JMSF013J09+ ATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
JMSF042G21+ TTTTTTTTTTATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
JMSF016L11+ TTTTTTTTTTATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
rJMSF016L11- AAT
JMSF026A20+ TTTTTTTTTNATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
                      ____________________________________________________________
consensus TTTTTTTTTTATATATACGGAACAACAATGAAAAATCTCGATTAGAAAT
 
. : . : . : . : . : . :
JMSF013J01+ TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMFF019K24+ TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMSF002H03+ TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMSF013J09+ TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMSF042G21+ TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGGTATAGATATAGAAATAGAAATA
JMSF016L11+ TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
rJMSF016L11- TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
JMSF026A20+ TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
                      ____________________________________________________________
consensus TTCCGAAGAAAAAAACTGAAAATTTTCTGCGGATTAGATATAGATATAGAAATAGAAATA
 
. : . : . : . : . : . :
JMSF013J01+ TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMFF019K24+ TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF002H03+ TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF013J09+ TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF042G21+ TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF016L11+ TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
rJMSF016L11- TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF018J08+ TGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
JMSF026A20+ TATGTATCTGCCTATAATAAAGTGTATATATTA-GGGAAATGGCGCGACCGATTATCAAA
                      ____________________________________________________________
consensus TATGTATCTGCCTATAATAAAGTGTATATATTACGGGAAATGGCGCGACCGATTATCAAA
 
. : . : . : . : . : . :
JMSF013J01+ GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMFF019K24+ GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF002H03+ GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF013J09+ GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF042G21+ GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF016L11+ GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
rJMSF016L11- GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF018J08+ GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
JMSF026A20+ GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
                      ____________________________________________________________
consensus GGCGGGAAACCCTAATCTGAGATTGACAGGTTTGATTCCTTAACGAATCCACACCTCCAG
 
. : . : . : . : . : . :
JMSF013J01+ CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMFF019K24+ CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF002H03+ CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF013J09+ CTCAAGACGATGGATAGATCNGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF042G21+ CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF016L11+ CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
rJMSF016L11- CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF018J08+ CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
JMSF026A20+ CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
                      ____________________________________________________________
consensus CTCAAGACGATGGATAGATCAGTAGTGATTATTGCAATTATTCGTAAAATCAGAGAAAAA
 
. : . : . : . : . : . :
JMSF013J01+ AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC
JMFF019K24+ AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGC
JMSF002H03+ AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGC
JMSF013J09+ AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGC
JMSF042G21+ AAATTAAAAAG-AAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC
JMSF016L11+ AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC
rJMSF016L11- AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC
JMSF018J08+ AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCC
JMSF026A20+ AAATTAAAAAG-AAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCCA
                      ____________________________________________________________
consensus AAATTAAAAAGAAAAAAAAAGAAATATAAAATCCAAAACTACACTACGAGCTGGGCGCCA