clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS008G10 | Sequence | 593 | 005109 (3) | ref|XP_009609647.1| | 7e-66 | PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial | |||||
JMSF019C09 | Sequence | 258 | 005109 (3) | ref|XP_009609647.1| | 5e-22 | PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial | 799 | 018188 | ref|XP_009785406.1| | 2e-83 | PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial |
JMSF025M07 | Sequence | 677 | 005109 (3) | ref|XP_009609647.1| | 7e-67 | PREDICTED: pentatricopeptide repeat-containing protein At1g74900, mitochondrial | 737 | 022549 | ref|XP_009611852.1| | 4e-51 | PREDICTED: GPI mannosyltransferase 1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS008G10+ CATCAAGAAAT
JMSF025M07+ AGAGCACATCAAGAAAT
____________________________________________________________
consensus AGAGCACATCAAGAAAT
. : . : . : . : . : . :
JMFS008G10+ GTATTGAAACAATTCAAATCCTGGGGGCAACCGTGTTTATGCATAGCCAAGAAAACCTTC
JMSF025M07+ GTATTGAAACAATTCAAATCCTGGGGGCAACCGTGTTTATGCATAGCCAAGAAAACCTTC
____________________________________________________________
consensus GTATTGAAACAATTCAAATCCTGGGGGCAACCGTGTTTATGCATAGCCAAGAAAACCTTC
. : . : . : . : . : . :
JMFS008G10+ AACGCCTTATCGGATTTGCCAGCAGAAATGTACCTTTCGGTGATGATAGCGAATGTTTTG
JMSF025M07+ AACGCCTTATCGGATTTGCCAGCAGAAATGTACCTTTCGGTGATGATAGCGAATGTTTTG
____________________________________________________________
consensus AACGCCTTATCGGATTTGCCAGCAGAAATGTACCTTTCGGTGATGATAGCGAATGTTTTG
. : . : . : . : . : . :
JMFS008G10+ GGGCGAGGGCCGAGCCGTCGGGCCTGCATCCGAGCCACGAGCTTCCAAAGAGTCCTGTAG
JMSF025M07+ GGGCGAGGGCCGAGCCGTCGGGCCTGCATCCGAGCCACGAGCTTCCAAAGAGTCCTGTAG
____________________________________________________________
consensus GGGCGAGGGCCGAGCCGTCGGGCCTGCATCCGAGCCACGAGCTTCCAAAGAGTCCTGTAG
. : . : . : . : . : . :
JMFS008G10+ TCGCGCATCCGGGCGGCGATATCTATGGCGTGGTTGAATGCAGCGGCGGAGTGAGCGTAA
JMSF019C09+ GGAGTGAGCNTAA
JMSF025M07+ TCGCGCATCCGGGCGGCGATATCTATGGCGTGGTTGAATGCAGCGGCGGAGTGAGCGTAA
____________________________________________________________
consensus TCGCGCATCCGGGCGGCGATATCTATGGCGTGGTTGAATGCAGCGGCGGAGTGAGCGTAA
. : . : . : . : . : . :
JMFS008G10+ GATGGGTGGCGATCGAGGTGGTTGAAGAATTGGAGCGCCTTAGGGCCATGGTTCCAGAGG
JMSF019C09+ GATGGNTGNCGATCGAGGTGGTTGAAGAATTGGAGCGCCTTAGGGCCATGGTTCCAGAGG
JMSF025M07+ GATGGGTGGCGATCGAGGTGGTTGAAGAATTGGAGCGCCTTAGGGCCATGGTTCCAGAGG
____________________________________________________________
consensus GATGGGTGGCGATCGAGGTGGTTGAAGAATTGGAGCGCCTTAGGGCCATGGTTCCAGAGG
. : . : . : . : . : . :
JMFS008G10+ CGCTTGAGGACGGCTTGGACGAGGTCTGGGGTCCATTGGGTGAAGTTGTGGAGGGTTGAA
JMSF019C09+ CGCTTGAGGACGGCTTGGACGAGGTCTGGGGTCCATTGGGTGAAGTTGTGGAGGGTTGAA
JMSF025M07+ CGCTTGAGGACGGCTTGGACGAGGTCTGGGGTCCATTGGGTGAAGTTGTGGAGGGTTGAA
____________________________________________________________
consensus CGCTTGAGGACGGCTTGGACGAGGTCTGGGGTCCATTGGGTGAAGTTGTGGAGGGTTGAA
. : . : . : . : . : . :
JMFS008G10+ GCTAGGGTCTTTGGGTCTTCCTTGAGGATGCGGTTGGAGAGCGTAACAGCGTCTATTGGT
JMSF019C09+ GCTAGGGTCTTTGGGTCTTCCTTGAGGATGCGGTTGGAGAGCGTAACAGCGTCTATTGGT
JMSF025M07+ GCTAGGGTCTTTGGGTCTTCCTTGAGGATGCGGTTGGAGAGCGTAACAGCGTCTATTGGT
____________________________________________________________
consensus GCTAGGGTCTTTGGGTCTTCCTTGAGGATGCGGTTGGAGAGCGTAACAGCGTCTATTGGT
. : . : . : . : . : . :
JMFS008G10+ TGGGCCGACGGCGGCGGCAACGGCGGCGCTGGAAGTGTGAGAGAGGCGGAGAGGTGGCGG
JMSF019C09+ TGGGCCGACGGCGGCGGCAACGGCGGCGCTGGAAGTGTGAGAGAGGCGGAGAGGTGGCGG
JMSF025M07+ TGGGCCGACGGCGGCGGCAACGGCGGCGCTGGAAGTGTGAGAGAGGCGGAGAGGTGGCGG
____________________________________________________________
consensus TGGGCCGACGGCGGCGGCAACGGCGGCGCTGGAAGTGTGAGAGAGGCGGAGAGGTGGCGG
. : . : . : . : . : . :
JMFS008G10+ GACAAGGAAAAGGGCTTAACGGGGGCGCTGGTGGGGATTGTACTTTTGAGTCTGAACATT
JMSF019C09+ GAC
JMSF025M07+ GACAAGGAAAAGGGCTTAACGGGGGCGCTGGTGGGGATTGTACTTTTGAGTCTGAACATT
____________________________________________________________
consensus GACAAGGAAAAGGGCTTAACGGGGGCGCTGGTGGGGATTGTACTTTTGAGTCTGAACATT
. : . : . : . : . : . :
JMFS008G10+ TTCTGGAGCAAGAACATAGAACCTCACCCTCAATGTTGATCG
JMSF025M07+ TTCTGGAGCAAGAACATAGAACCTCACCCTCAATGTTGATCGAAAAATAAAACCAATTGA
____________________________________________________________
consensus TTCTGGAGCAAGAACATAGAACCTCACCCTCAATGTTGATCGAAAAATAAAACCAATTGA
. : . : . : . : . : . :
JMSF025M07+ AGAATGATCCCTAATTAGCCCTCTATCTTGAATCAGTATAATCAAATTGATCATCACCCC
____________________________________________________________
consensus AGAATGATCCCTAATTAGCCCTCTATCTTGAATCAGTATAATCAAATTGATCATCACCCC