Contig 005100:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS118A10Sequence603005100 (4)ref|XP_008454630.1|5e-06PREDICTED: myosin-2-like [Cucumis melo]
JMSF010F24Sequence330005100 (4)587005679 (15)ref|XP_007030998.1|9e-27ATP-dependent caseinolytic (Clp) protease/crotonase family protein isoform 1 [T
JMSF024K22Sequence495005100 (4)
JMSF046M16Sequence708005100 (4)ref|XP_008454630.1|5e-05PREDICTED: myosin-2-like [Cucumis melo]725004389 (2)emb|CBI20376.3|9e-76unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMSF046M16+                      CGGCAACGGTCTCTTGACGGATGGTGGCCTAGTCCTAGGTGTGGATTTT
                      ____________________________________________________________
consensus                        CGGCAACGGTCTCTTGACGGATGGTGGCCTAGTCCTAGGTGTGGATTTT
 
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JMFS118A10+              CGAGCCGGCAGCTCCGGCGGCAAGTCTTTTGGCTTATCATATCCCGTTCTACGCTGG
JMSF046M16+           GGGCGAGCCGGCAGCTCCGGCGGCAAGTCTTTTGGCTTATCATATCCCGTTCTACGCTGG
                      ____________________________________________________________
consensus             GGGCGAGCCGGCAGCTCCGGCGGCAAGTCTTTTGGCTTATCATATCCCGTTCTACGCTGG
 
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JMFS118A10+           AGAGCCTCCAGCATTTCTTCGAGCCGGCTCCGAGATAATGCGGAAGGCGAAACGGATAAC
JMSF046M16+           AGAGCCTCCAGCATTTCTTCGAGCCGGCTCCGAGATAATGCGGAAGGCGAAACGGATAAC
                      ____________________________________________________________
consensus             AGAGCCTCCAGCATTTCTTCGAGCCGGCTCCGAGATAATGCGGAAGGCGAAACGGATAAC
 
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JMFS118A10+           ATCTTTTCGGGTAAAGAAATCAGGGAAAACCTCTTCTTTGAAATTATAATTCAACACGAA
JMSF046M16+           ATCTTTTCGGGTAAAGAAATCAGGGAAAACCTCTTCTTTGAAATTATAATTCAACACGAA
JMSF024K22+                                                         TAATTCANCACGAA
                      ____________________________________________________________
consensus             ATCTTTTCGGGTAAAGAAATCAGGGAAAACCTCTTCTTTGAAATTATAATTCAACACGAA
 
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JMFS118A10+           TCATAACCAAATATAGGTGCTCCCCGAATTCGAACAATGCCTGGGGGGAAGCATTGCTTG
JMSF046M16+           TCATAACCAAATATAGGTGCTCCCCGAATTCGAACAATGCCTGGGGGGAAGCATTGCTTG
JMSF024K22+           TCATANCCANATATAGGTGCTCCCCGAATTCGAACAATGCCTGGGGGGAAGCATTGCTTG
                      ____________________________________________________________
consensus             TCATAACCAAATATAGGTGCTCCCCGAATTCGAACAATGCCTGGGGGGAAGCATTGCTTG
 
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JMFS118A10+           AAACCACGACAAAACCCCTAAATCTAACAACTATCCCGGAAAAAGCCGCCGGAAATGGAA
JMSF046M16+           AAACCACGACAAAACCCCTAAATCTAACAACTATCCCGGAAAAAGCCGCCGGAAATGGAA
JMSF024K22+           AAACCACGACAAAACCCCTAAATCTAACAACTATCCCGGAAAAAGCCGCCGGAAATGGAA
                      ____________________________________________________________
consensus             AAACCACGACAAAACCCCTAAATCTAACAACTATCCCGGAAAAAGCCGCCGGAAATGGAA
 
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JMFS118A10+           AATCTGGCGTTGTTCTTCGTGTACAGAGATCCAAATTCCTAGGAGAAGGCAATTTCACAA
JMSF010F24+                             GTGTACAGAGATCCAAATTCCTAGGAGAAGGCAATTTCACAA
JMSF046M16+           AATCTGGCGTTGTTCTTCGTGTACAGAGATCCAAATTCCTAGGAGAAGGCAATTTCACAA
JMSF024K22+           AATCTGGCGTTGTTCTTCGTGTACAGAGATCCAAATTCCTAGGAGAAGGCAATTTCACNA
                      ____________________________________________________________
consensus             AATCTGGCGTTGTTCTTCGTGTACAGAGATCCAAATTCCTAGGAGAAGGCAATTTCACAA
 
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JMFS118A10+           CAAGAAACACATCTAACGTTGCATGTGAGAAAGTGAAAATCTCTTGAGCTGGCAACGCTT
JMSF010F24+           CAAGAAACACATCTAACGTTGCATGTGAGAAAGTGAAAATCTCTTGAGCTGGCAACGCTT
JMSF046M16+           CAAGAAACACATCTAACGTTGCATGTGAGAAAGTGAAAATCTCTTGAGCTGGCAACGCTT
JMSF024K22+           CAAGAAACACATCNAACGTTGCATGTGNGAAAGTGAAAATCTCTTGAGCTGGCAACGCTT
                      ____________________________________________________________
consensus             CAAGAAACACATCTAACGTTGCATGTGAGAAAGTGAAAATCTCTTGAGCTGGCAACGCTT
 
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JMFS118A10+           GGTTTCTGTAATGAATTCTGAATGAAAGGGCCAAAATAAAAAGAGAAAAGAAAAACAACG
JMSF010F24+           GGTTTCTGTAATGAATTCTGAATGAAAGGGCCAAAATAAAAAGAGAAAAGAAAAACAACG
JMSF046M16+           GGTTTCTGTAATGAATTCTGAATGAAAGGGCCAAAATAAAAAGAGAAAAGAAAAACAACG
JMSF024K22+           GGTTTCTGTAATGAATT-TGANTGAAAGGGCCAAAATAAAAAGAGAAANGAAAAACAACG
                      ____________________________________________________________
consensus             GGTTTCTGTAATGAATTCTGAATGAAAGGGCCAAAATAAAAAGAGAAAAGAAAAACAACG
 
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JMFS118A10+           GTGTTTCAGAAATTGAAGTTAAAATTTCCCAGGCTGAACCGGGAACGCCTAATCCTCCCA
JMSF010F24+           GTGTTTCAGAAATTGAAGTTAAAATTTCCCAGGCTGAACCGGGAACGCCTAATCCTCCCA
JMSF046M16+           GTGTTTCAGAAATTGAAGTTAAAATTTCCCAGGCTGAACCGGGAACGCCTAATCCTCCCA
JMSF024K22+           GTGTTTCAGAAATTGAAGTTAAAATTTCCCAGGCTGAACCGGGAACGCCTAATCCTCCCA
                      ____________________________________________________________
consensus             GTGTTTCAGAAATTGAAGTTAAAATTTCCCAGGCTGAACCGGGAACGCCTAATCCTCCCA
 
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JMFS118A10+           AAGGTTGAGTCACTCGGGAGAAGTTAGAAACAAACCCTCCACCCTCCGGGGAAGAGAAGG
JMSF010F24+           AAGGTTGAGTCACTCGGGAGAAGTTAGAAACAAACCCTCCACCCTCCGGGGAAGAGAAGG
JMSF046M16+           AAGGTTGAGTCACTCGGGAGAAGTTAGAAACAAACCCTCCACCCTCCGGGGAAGAGAAGG
JMSF024K22+           AAGGTTGAGTCACTCGGGAGAAGTTAGAAACAAACCCTCCACCCTCCGGGGAAGAGAAGG
                      ____________________________________________________________
consensus             AAGGTTGAGTCACTCGGGAGAAGTTAGAAACAAACCCTCCACCCTCCGGGGAAGAGAAGG
 
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JMFS118A10+           AGGAGA                                                      
JMSF010F24+           AGGAGAGAATATTTGAAGAATAGATGAGATCAATAATGGCAGAAAC              
JMSF046M16+           AGGAGAGAATATTTGAAGAATAGATGAGATCAATAATGGCAGAAACAGAAATTATCTCC 
JMSF024K22+           AGGAGAGAATATNTGAAGAATAGATGAGATCAATAATGGCAGAAACAGAAATTATCTCCC
                      ____________________________________________________________
consensus             AGGAGAGAATATTTGAAGAATAGATGAGATCAATAATGGCAGAAACAGAAATTATCTCCC