| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002L15 | Sequence | 563 | 005094 (13) | gb|EYU24992.1| | 5e-100 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy | 634 | 005094 (13) | ref|XP_002280012.2| | 2e-100 | PREDICTED: 40S ribosomal protein S13 [Vitis vinifera] |
| JMFF007H05 | Sequence | 558 | 005094 (13) | gb|EYU24992.1| | 5e-100 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy | 731 | 005094 (13) | gb|EYU24992.1| | 4e-99 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy |
| JMFF012J11 | Sequence | 586 | 005094 (13) | gb|EYU24992.1| | 7e-100 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy | 648 | 005094 (13) | ref|XP_002280012.2| | 2e-100 | PREDICTED: 40S ribosomal protein S13 [Vitis vinifera] |
| JMFF042P04 | Sequence | 643 | 005094 (13) | gb|EYU24992.1| | 4e-99 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy | 436 | 005094 (13) | ref|XP_009596116.1| | 1e-41 | PREDICTED: 40S ribosomal protein S13-like [Nicotiana tomentosiformis] |
| JMFF049C22 | Sequence | 647 | 005094 (13) | gb|EYU24992.1| | 1e-99 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy | 619 | 005094 (13) | gb|EYU24992.1| | 2e-94 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy |
| JMFN012I18 | Sequence | 590 | 005094 (13) | gb|EYU24992.1| | 7e-78 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy | |||||
| JMSF023N02 | Sequence | 675 | 005094 (13) | gb|EYU24992.1| | 8e-99 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy | 649 | 005094 (13) | gb|EYU24992.1| | 6e-99 | hypothetical protein MIMGU_mgv1a015639mg [Erythranthe guttata] gb|EYU43531.1| hy |
This contig is upended
. : . : . : . : . : . :
rJMFF049C22- AACATGAAGAGACACTCTTGTACTGTATAATACGGAGTAATAATAATAA
JMSF023N02+ GGAGTAATAATAATAA
____________________________________________________________
consensus AACATGAAGAGACACTCTTGTACTGTATAATACGGAGTAATAATAATAA
. : . : . : . : . : . :
rJMFF049C22- TAATCCATCATTTCCAAGCAAAAATAATCATGTCAAAATCACAAAATTTAGTTTAACAAA
rJMSF023N02- AGCAAAAATAATCATGTCAAAATCACAAAATTTAGTTTAACAAA
JMFF049C22+ TTTCCAAGCAAAAATAATCATGTCAAAATCACAAAATNTAGTT-AACAAA
JMFF042P04+ AAGCAAAAATAATCATGTCAAAATCACAAAATTTAGTTAACANAA
rJMFF012J11- AGCAAAAATAATCATGTCAAAATCACAAAATTTAGTTTAACAAA
rJMFF002L15- TAATCATGTCAAAATCACAAAATTTAGTTTAACAAA
JMSF023N02+ TAATCCATCATTTCCAAGCAAAAATAATCATGTCAAAATCACAAAATTTAGTTTAACAAA
____________________________________________________________
consensus TAATCCATCATTTCCAAGCAAAAATAATCATGTCAAAATCACAAAATTTAGTTTAACAAA
. : . : . : . : . : . :
rJMFF049C22- GGTTTCCCTTGGATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
rJMSF023N02- GGTTTCCCTTGGATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
JMFF012J11+ GATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
JMFF007H05+ TTCTTGTCATTTAGGAACTTC
JMFF049C22+ GGTTTCCCTTGGATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
JMFF042P04+ GGTTTCCCTTGGATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
rJMFF012J11- GGTTTCCCTTGGATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
rJMFF002L15- GGTTTCCCTTGGATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
JMFF002L15+ CTTCCTTCTTGTCATTTAGGAACTTC
JMSF023N02+ GGTTTCCCTTGGATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
____________________________________________________________
consensus GGTTTCCCTTGGATAAAACTACTATCTCCTGTCCCTTCCTTCTTGTCATTTAGGAACTTC
. : . : . : . : . : . :
rJMFF049C22- TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
rJMSF023N02- TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
JMFF012J11+ TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
JMFF007H05+ TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
JMFF049C22+ TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
rJMFF042P04- CTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
JMFF042P04+ TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
rJMFF012J11- TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
rJMFF002L15- TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
JMFF002L15+ TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
JMFN012I18+ CTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
rJMFF007H05- CTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
JMSF023N02+ TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
____________________________________________________________
consensus TGCTCTCTAGCCTATGCCACAAGGGTGCTGGCAGTGGTTGACTCGTATTTCCAAACTGGG
. : . : . : . : . : . :
rJMFF049C22- GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
rJMSF023N02- GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
JMFF012J11+ GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
JMFF007H05+ GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
JMFF049C22+ GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
rJMFF042P04- GGGAGCTTCTTGGTCTTCTTGTAATAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
JMFF042P04+ GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
rJMFF012J11- GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
rJMFF002L15- GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
JMFF002L15+ GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
JMFN012I18+ GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
rJMFF007H05- GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
JMSF023N02+ GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
____________________________________________________________
consensus GGGAGCTTCTTGGTCTTCTTGTAGTAACGGGCAAGGCGGTGGATCCTGCTCTCAACCAAA
. : . : . : . : . : . :
rJMFF049C22- ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
rJMSF023N02- ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
JMFF012J11+ ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
JMFF007H05+ ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
JMFF049C22+ ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
rJMFF042P04- ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGGGCTTCCTGATTGCA
JMFF042P04+ ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
rJMFF012J11- ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
rJMFF002L15- ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
JMFF002L15+ ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
JMFN012I18+ ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
rJMFF007H05- ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
JMSF023N02+ ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
____________________________________________________________
consensus ATGAGACGGAACTTGGAATCCTTGTCCTTTCTATTCCTCTCCAAGTGCTTCCTGATTGCA
. : . : . : . : . : . :
rJMFF049C22- ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
rJMSF023N02- ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
JMFF012J11+ ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
JMFF007H05+ ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
JMFF049C22+ ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
rJMFF042P04- ACAGCCTCCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATG
JMFF042P04+ ACAGCCTCCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
rJMFF012J11- ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
rJMFF002L15- ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
JMFF002L15+ ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
JMFN012I18+ ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
rJMFF007H05- ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
JMSF023N02+ ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
____________________________________________________________
consensus ACAGCCTTCTTAATGAGGTGGTAGAGATCCTCTGGAATCTCGGGAGCAAGCCCATGAGCC
. : . : . : . : . : . :
rJMFF049C22- TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
rJMSF023N02- TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
JMFF012J11+ TTGAGAATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
JMFF007H05+ TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
JMFF049C22+ TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
JMFF042P04+ TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
rJMFF012J11- TTGAGAATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
rJMFF002L15- TTGAGAATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
JMFF002L15+ TTGAGAATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
JMFN012I18+ TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
rJMFF007H05- TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
JMSF023N02+ TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
____________________________________________________________
consensus TTGAGGATACGCAGGATTTTGCTGCCAGTGACACTCTTCACCTGAGCAATTCCATGTGAA
. : . : . : . : . : . :
rJMFF049C22- TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
rJMSF023N02- TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
JMFF012J11+ TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
JMFF007H05+ TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
JMFF049C22+ TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
JMFF042P04+ TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
rJMFF012J11- TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
rJMFF002L15- TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
JMFF002L15+ TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
JMFN012I18+ TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
rJMFF007H05- TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
JMSF023N02+ TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
____________________________________________________________
consensus TCTCGCAGAATAACACCAATCTGCGATGGTGTCATGCCCCTCTTGGCATGCTTACAAATG
. : . : . : . : . : . :
rJMFF049C22- CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
rJMSF023N02- CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
JMFF012J11+ CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
JMFF007H05+ CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
JMFF049C22+ CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
JMFF042P04+ CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
rJMFF012J11- CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
rJMFF002L15- CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
JMFF002L15+ CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
JMFN012I18+ CTCTCATCCACATCTTGAGCGGAGA
rJMFF007H05- CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
JMSF023N02+ CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
____________________________________________________________
consensus CTCTCATCCACATCTTGAGCGGAGATCTTGAGCCAACTCGGAGGAGTCCTCTTGTAAGGA
. : . : . : . : . : . :
rJMFF049C22- AGAGCTGAAGATGAGATACCCTTACCGCGG
rJMSF023N02- AGAGCTGAAGATGAGATACCCTCACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
JMFF012J11+ AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
JMFF007H05+ AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
JMFF049C22+ AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
JMFF042P04+ AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
rJMFF012J11- AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGCGGGAGGT
rJMFF002L15- AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGCGGGAGGT
JMFF002L15+ AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
rJMFF007H05- AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
JMSF023N02+ AGAGCTGAAGATGAGATACCCTCACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
____________________________________________________________
consensus AGAGCTGAAGATGAGATACCCTTACCGCGGCTGTGCATACGACCCATGGTGGC-GGAGGT
. : . : . : . : . : . :
rJMSF023N02- TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTC
JMFF012J11+ TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTC
JMFF007H05+ TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTC
JMFF049C22+ TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTC
JMFF042P04+ TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCC
rJMFF012J11- TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTC
rJMFF002L15- TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTC
JMFF002L15+ TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTC
rJMFF007H05- TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTC
JMSF023N02+ TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTCCC
____________________________________________________________
consensus TGTGGTTGAGCTCGGACGCTAGCTGCTGTAACCTCCTCGATCGTCTGTCTTCTCCCTCCC