Contig 005071:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS041D01Sequence625005071 (2)ref|XP_009757134.1|158PREDICTED: uncharacterized protein LOC104210037 [Nicotiana sylvestris] ref|XP_00
JMSF021M13Sequence700005071 (2)ref|XP_009757134.1|183PREDICTED: uncharacterized protein LOC104210037 [Nicotiana sylvestris] ref|XP_00787020378gb|KCW86106.1|2e-61hypothetical protein EUGRSUZ_B02804 [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021M13+ TGAAATGCCACAGTACATATTTCATACATAAACTTCTGCA
                      ____________________________________________________________
consensus TGAAATGCCACAGTACATATTTCATACATAAACTTCTGCA
 
. : . : . : . : . : . :
JMFS041D01+ TTCAAGCGAATCATCCAATTCACTTGAATACAATCCCTGAATGG
JMSF021M13+ CCCATGCCCAAGATGTTTCAAGCGAATCATCCAATTCACTTGAATACAATCCCTGAATGG
                      ____________________________________________________________
consensus CCCATGCCCAAGATGTTTCAAGCGAATCATCCAATTCACTTGAATACAATCCCTGAATGG
 
. : . : . : . : . : . :
JMFS041D01+ CAACTTTGAACAGCATACTACGAAATATCTCAATTCCACATGTAATAGACTGTCTAGCAA
JMSF021M13+ CAACTTTGAACAGCATACTACGAAATATCTCAATTCCACATGTAATAGACTGTCTAGCAA
                      ____________________________________________________________
consensus CAACTTTGAACAGCATACTACGAAATATCTCAATTCCACATGTAATAGACTGTCTAGCAA
 
. : . : . : . : . : . :
JMFS041D01+ CAGCAGGTGTGTCATCCTTAAGGGCAGTGATCAATAAAGGTATGATTGCAGGTAGGAATT
JMSF021M13+ CAGCAGGTGTGTCATCCTTAAGGGCAGTGATCAATAAAGGTATGATTGCAGGTAGGAATT
                      ____________________________________________________________
consensus CAGCAGGTGTGTCATCCTTAAGGGCAGTGATCAATAAAGGTATGATTGCAGGTAGGAATT
 
. : . : . : . : . : . :
JMFS041D01+ CAATATGTCTGATCCCAATAGGACTGAGCATCTCTATTGTGAATTTGCGAACTGGACTAA
JMSF021M13+ CAATATGTCTGATCCCAATAGGACTGAGCATCTCTATTGTGAATTTGCGAACTGGACTAA
                      ____________________________________________________________
consensus CAATATGTCTGATCCCAATAGGACTGAGCATCTCTATTGTGAATTTGCGAACTGGACTAA
 
. : . : . : . : . : . :
JMFS041D01+ ATCGATCGGAGACGAAGTCGAGGAGAAGAGGGAGGAACTCCGTGAGCAAGATGGAGTCGG
JMSF021M13+ ATCGATCGGAGACGAAGTCGAGGAGAAGAGGGAGGAACTCCGTGAGCAAGATGGAGTCGG
                      ____________________________________________________________
consensus ATCGATCGGAGACGAAGTCGAGGAGAAGAGGGAGGAACTCCGTGAGCAAGATGGAGTCGG
 
. : . : . : . : . : . :
JMFS041D01+ CGTCGGATACCTCATCCTTGAGCCGGCGCAAGTAGCCCATCTTTGATGGAACGGCTGCAG
JMSF021M13+ CGTCGGATACCTCATCCTTGAGCCGGCGCAAGTAGCCCATCTTTGATGGAACGGCTGCAG
                      ____________________________________________________________
consensus CGTCGGATACCTCATCCTTGAGCCGGCGCAAGTAGCCCATCTTTGATGGAACGGCTGCAG
 
. : . : . : . : . : . :
JMFS041D01+ CAAGCTTGGAGGAGTTCAGAAGATCCGCTACTTTCTCTCTGGAAACTGCCGCCATCATTC
JMSF021M13+ CAAGCTTGGAGGAGTTCAGAAGATCCGCTACTTTCTCTCTGGAAACTGCCGCCATCATTC
                      ____________________________________________________________
consensus CAAGCTTGGAGGAGTTCAGAAGATCCGCTACTTTCTCTCTGGAAACTGCCGCCATCATTC
 
. : . : . : . : . : . :
JMFS041D01+ CGACCATTGCTCCTCGCAACGAAACCCTAGTTCTCCGAGCTTCAGTCACCAAAGTTTCAT
JMSF021M13+ CGACCATTGCTCCTCGCAACGAAACCCTAGTTCTCCGAGCTTCAGTCACCAAAGTTTCAT
                      ____________________________________________________________
consensus CGACCATTGCTCCTCGCAACGAAACCCTAGTTCTCCGAGCTTCAGTCACCAAAGTTTCAT
 
. : . : . : . : . : . :
JMFS041D01+ GGAGAATTCGAGCGCGGAAGATAGAATGATAGAGAGAGAGCTGTAGACTACCGTCGCCAG
JMSF021M13+ GGAGAATTCGAGCGCGGAAGATAGAATGATAGAGAGAGAGCTGTAGACTACCGTCGCCAG
                      ____________________________________________________________
consensus GGAGAATTCGAGCGCGGAAGATAGAATGATAGAGAGAGAGCTGTAGACTACCGTCGCCAG
 
. : . : . : . : . : . :
JMFS041D01+ ATTGAAATGATGGCCTTTTGGGAGGGTGAAAGGTTTAACGCAGCAGTACGGATTTTGGGA
JMSF021M13+ ATTGAAATGATGGCCTTTTGGGAGGGTGAAAGGTTTAACGCAGCAGTACGGATTTTGGGA
                      ____________________________________________________________
consensus ATTGAAATGATGGCCTTTTGGGAGGGTGAAAGGTTTAACGCAGCAGTACGGATTTTGGGA
 
. : . : . : . : . : . :
JMFS041D01+ GGGAATTCCCACGCCGGAGGCCGG
JMSF021M13+ GGGAATTCCCACGCCGGAGGCCGGAGCTTTCACGACGGCCTTTAAACTCTTTAACTCGTC
                      ____________________________________________________________
consensus GGGAATTCCCACGCCGGAGGCCGGAGCTTTCACGACGGCCTTTAAACTCTTTAACTCGTC