Contig 005062:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020F17-                AATATTTTGTGTGTACAAAACAAAACAACAATTAAGATCTACTCAAACTCCTTA
                      ____________________________________________________________
consensus                   AATATTTTGTGTGTACAAAACAAAACAACAATTAAGATCTACTCAAACTCCTTA
 
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rJMSF020F17-          ACCCAACCCACTCTAATATTATTCTTACTTATATAGAGTCTCTTATTTATGACACTATGA
                      ____________________________________________________________
consensus             ACCCAACCCACTCTAATATTATTCTTACTTATATAGAGTCTCTTATTTATGACACTATGA
 
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rJMSF020F17-          TGGTGGTATCTCCATTGTTGAAGCTTGACATCCCTGGATATATTGGGTGCCTAGAAGAAG
                      ____________________________________________________________
consensus             TGGTGGTATCTCCATTGTTGAAGCTTGACATCCCTGGATATATTGGGTGCCTAGAAGAAG
 
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rJMSF020F17-          ATGATGGACTCTGATTCACAGACAAAGACAGACTCAATGACAAAAACGAAGGCTCGGTGT
                      ____________________________________________________________
consensus             ATGATGGACTCTGATTCACAGACAAAGACAGACTCAATGACAAAAACGAAGGCTCGGTGT
 
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rJMSF020F17-          CCATGCCTTGATTCAAGTTAAGCTCAATTCGTGCTGATGGATTAGTAGTCACTGGGCAGA
                      ____________________________________________________________
consensus             CCATGCCTTGATTCAAGTTAAGCTCAATTCGTGCTGATGGATTAGTAGTCACTGGGCAGA
 
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rJMSF020F17-          TAAACCTGGAAATTGGATTATTGACCTCGTCTGTTCGGGCAATGGCTAGATTTTCTATTG
                      ____________________________________________________________
consensus             TAAACCTGGAAATTGGATTATTGACCTCGTCTGTTCGGGCAATGGCTAGATTTTCTATTG
 
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rJMSF020F17-          GCTTCTTCTCCTCAACTTGGACTGGTTGCAAAACAGGAGCAACTGTCACCGGTATACGAG
                      ____________________________________________________________
consensus             GCTTCTTCTCCTCAACTTGGACTGGTTGCAAAACAGGAGCAACTGTCACCGGTATACGAG
 
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rJMSF020F17-          AAACTGAAAATGGATTGATCCGGGATGGTTCTGAAGTAGGCAATGGCGTCGGTGGTGAGA
                      ____________________________________________________________
consensus             AAACTGAAAATGGATTGATCCGGGATGGTTCTGAAGTAGGCAATGGCGTCGGTGGTGAGA
 
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rJMSF020F17-          TAGCTGCCAGAGTCGAATTTTCTTGAGGAGCTTTTACATCTGCTGCTGTTGACATTGGAG
                      ____________________________________________________________
consensus             TAGCTGCCAGAGTCGAATTTTCTTGAGGAGCTTTTACATCTGCTGCTGTTGACATTGGAG
 
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rJMSF020F17-          TCACCGAGTCTGTGGTAATGTCAAAGAGGCTAGATCGGCGGCGGCGGCGGTTGAGGTTGC
JMFN014H18+                                                       CGGCGGTTGAGGTTGC
                      ____________________________________________________________
consensus             TCACCGAGTCTGTGGTAATGTCAAAGAGGCTAGATCGGCGGCGGCGGCGGTTGAGGTTGC
 
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rJMSF020F17-          TCCGGCGGAGGAAGTATTTCTGAGCATGACTTGCCACTTGTGTAGGGGTTCGAGTCTTCA
JMFN014H18+           TCCGGCGGAGGAAGTATTTCTGAGCATGACTTGCCACTTGTGTAGGGGTTCGAGTCTTCA
JMFF002E10+                                                 TGTGTAGGGGTTCGAGTCTTCA
JMSF020F17+                CGGAGGAAGTATTTCTGAGCATGACTTGCCACTTGTGTAGGGGTTCGAGTCTTCA
                      ____________________________________________________________
consensus             TCCGGCGGAGGAAGTATTTCTGAGCATGACTTGCCACTTGTGTAGGGGTTCGAGTCTTCA
 
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rJMSF020F17-          CAAAGTTTCTGGAGATTCCCCTCCAGTCTCCCTTCCCCACCTTCTGCAACCCTAATAGGA
JMFN014H18+           CAAAGTTTCTGGAGATTCCCCTCCAGTCTCCCTTCCCCACCTTCTGCAACCCTAATAGGA
JMFF002E10+           CAAAGTTTCTGGAGATTCCCCTCCAGTCTCCCTTCCCCACCTTCTGCAACCCTAATAGGA
JMSF020F17+           CAAAGTTTCTGGAGATTCCCCTCCAGTCTCCCTTCCCCACCTTCTGCAACCCTAATAGGA
                      ____________________________________________________________
consensus             CAAAGTTTCTGGAGATTCCCCTCCAGTCTCCCTTCCCCACCTTCTGCAACCCTAATAGGA
 
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rJMSF020F17-          ACAATTTGTGCTCTTCCTCCGTCCATGGAACTCCTCGCTTACGCTCGCGGCCGCTGCTAG
JMFN014H18+           ACAATTTGTGCTCTTCCTCCGTCCATGGAACTCCTCGCTTACGCTCGCGGCCGCTGCTAG
JMFF002E10+           ACAATTTGTGCTCTTCCTCCGTCCATGGAACTCCTCGCTTACGCTCGCGGCCGCTGCTAG
JMSF020F17+           ACAATTTGTGCTCTTCCTCCGTCCATGGAACTCCTCGCTTACGCTCGCGGCCGCTGCTAG
                      ____________________________________________________________
consensus             ACAATTTGTGCTCTTCCTCCGTCCATGGAACTCCTCGCTTACGCTCGCGGCCGCTGCTAG
 
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rJMSF020F17-          GC                                                          
JMFN014H18+           GCTGGTGGAGGACGGCGTCGTCAGCCGAGGCATATCCCTCATCAGCCGGCGGCGGCGGCG
JMFF002E10+           GCTGGTGGAGGACGGCGTCGTCAGCCGAGGCATATCCCTCATCAGCCGGCGGCGGCGGCG
JMSF020F17+           GCTGGTGGAGGACGGCGTCGTCAGCCGAGGCATATCCCTCATCAGCCGGCGGCGGCGGCG
                      ____________________________________________________________
consensus             GCTGGTGGAGGACGGCGTCGTCAGCCGAGGCATATCCCTCATCAGCCGGCGGCGGCGGCG
 
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JMFN014H18+           GCGAGTTTTTGGCGGACTCGTTATTCTTGTTGGTATTGTTCGGCTGTTCATACTAGGACA
JMFF002E10+           GCGAGTTTTTGGCGGACTCGTTATTCTTGTTGGTATTGTTCGGCTGTTCATACTGGGACA
JMSF020F17+           GCGAGTTTTTGGCGGACTCGTTATTCTTGTTGGTATTGTTCGGCTGTTCATACTGGGACA
                      ____________________________________________________________
consensus             GCGAGTTTTTGGCGGACTCGTTATTCTTGTTGGTATTGTTCGGCTGTTCATACTGGGACA
 
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JMFN014H18+           AGTTATTGAGACTGACGCTCTTCCTCATGGGGTCCACCTTCACTCTAACTCCGAACAGCA
JMFF002E10+           AGTTATTGAGACTGACGCTCTTCCTCATGGGGTCCACCTTCACTCTAACTCCGAACAGCA
JMSF020F17+           AGTTATTGAGACTGACGCTCTTCCTCATGGGGTCCACCTTCACTCTAACTCCGAACAGCA
                      ____________________________________________________________
consensus             AGTTATTGAGACTGACGCTCTTCCTCATGGGGTCCACCTTCACTCTAACTCCGAACAGCA
 
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JMFN014H18+           TGATCTCGGCGGCACCTCCGGCGCCGTCGACGGCCGAGTCATTCGCCGCCGAATCGCCGC
JMFF002E10+           TGATCTCGGCGGCACCTCCGGCGCCGTCGACGGCCGAGTCATTCGCCGCCGAATCGCCGC
JMSF020F17+           TGATCTCGGCGGCACCTCCGGCGCCGTCGACGGCCGAGTCATTCGCCGCCGAATCGCCGC
                      ____________________________________________________________
consensus             TGATCTCGGCGGCACCTCCGGCGCCGTCGACGGCCGAGTCATTCGCCGCCGAATCGCCGC
 
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JMFN014H18+           ACGTGCGCAAGCTGACATACTGCGAGCGGCAGAGCGCAGCCATCCGCGGTTCCCCTCTGA
JMFF002E10+           ACGTGCGCAAGCTGACATACTGCGAGCGGCAGAGCGCAGCCATACGCGGTTCCCCTCTGA
JMSF020F17+           ACGTGCGCAAGCTGACATACTGCGAGCGGCAGAGCGCAGCCATCCGCGGTTCCCCTCTGA
                      ____________________________________________________________
consensus             ACGTGCGCAAGCTGACATACTGCGAGCGGCAGAGCGCAGCCATCCGCGGTTCCCCTCTGA
 
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JMFN014H18+           TAAATCAACAACCACTTTATTGATCAATCAATCAATCAATCGATTGATTGAAATTATCAT
JMFF002E10+           TAAATCAACAACCACTTTATTGATCAATCAATCAATCAATCGATTGATTGAAATTATCAT
JMSF020F17+           TAAATCAACAACCACTTTATTGATCAATCAATCAATCAATCGATTGATTGAAATTATCAT
                      ____________________________________________________________
consensus             TAAATCAACAACCACTTTATTGATCAATCAATCAATCAATCGATTGATTGAAATTATCAT
 
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JMFN014H18+           AAGATCGTCTGAAACTACGTTTACGTACGCTTTTCCGAAGTAG                 
JMFF002E10+           AAGATCGTCTGAAACTACGTTTACGTACGCTTTTCCGAAGTAGGGATACGACGGT     
JMSF020F17+           AAGATCGTCTGAAACTACGTTTACGTACGCTTTTCCGAAGTAGGGATACGACGGTCGACC
                      ____________________________________________________________
consensus             AAGATCGTCTGAAACTACGTTTACGTACGCTTTTCCGAAGTAGGGATACGACGGTCGACC