Contig 005061:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047A23Sequence493005061 (2)ref|XP_006350867.1|3e-74PREDICTED: mitoferrin-like [Solanum tuberosum]
JMSF020D08Sequence676005061 (2)ref|XP_009801379.1|2e-82PREDICTED: mitoferrin-like isoform X3 [Nicotiana sylvestris]786024544ref|XP_009623931.1|4e-75PREDICTED: mitoferrin-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF047A23+                                                                      A
JMSF020D08+                                                       TCCATGGGCGTGAACA
                      ____________________________________________________________
consensus                                                         TCCATGGGCGTGAACA
 
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JMFF047A23+           CGGCGTCGCTGGCCACCGTGGCGCAGACGCCCGACGCGGAATGGGCGGCGGAGTTACTCG
JMSF020D08+           CGGCGTCGCTGGCGACGGTGGCGCACACCCCCGACGCGGCGTGGGCGGCGGAGTTATTGG
                      ____________________________________________________________
consensus             CGGCGTCGCTGGCGACGGTGGCGCAGACGCCCGACGCGGCGTGGGCGGCGGAGTTATTGG
 
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JMFF047A23+           GATTTCCTCCGGAAAACGCCTCCTTACAGAGCTCATAAACGGAGAAGTACACCGCGTGAG
JMSF020D08+           GGTTCCCGCCGGAAAACGTCTCCTTACAGAACTCGTAAACGGAGAAGTACACCGCGTGGG
                      ____________________________________________________________
consensus             GGTTTCCTCCGGAAAACGTCTCCTTACAGAGCTCGTAAACGGAGAAGTACACCGCGTGGG
 
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JMFF047A23+           CCGGGCCGGCCCCGAGGGCCATCGCTCCAATACCGCGATAAAACCCGGCAACGCCTTCGG
JMSF020D08+           CCGGGCCCGCTCCAAGGCCCATGGCCCCAATCCCGCGGTAAAGCCCAGCAACGCCCTCGG
                      ____________________________________________________________
consensus             CCGGGCCGGCTCCGAGGGCCATGGCTCCAATCCCGCGGTAAAGCCCGGCAACGCCTTCGG
 
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JMFF047A23+           ATTTAAGTATAGACTGAACGGCGTGACGAATGCCAACGGACTTGATTGGGCAAAACCCTA
JMSF020D08+           ATCTGAGGATGGACTGGAGGGCCTGGCGAACGCCAACGGACTTGATTGGGCAAGACCCTA
                      ____________________________________________________________
consensus             ATTTGAGTATGGACTGGAGGGCGTGGCGAATGCCAACGGACTTGATTGGGCAAGACCCTA
 
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JMFF047A23+           CGGCTTGCATTTGGGTCTTGACAGTGCCGACGGGGAACATTGCCATGTGCTCCACCATGC
JMSF020D08+           GGGCTTGCATTTGGGTCTTGACGGTGTCGACGGGGAACATGGCCATGTGCTCCACCATGC
                      ____________________________________________________________
consensus             GGGCTTGCATTTGGGTCTTGACGGTGTCGACGGGGAACATTGCCATGTGCTCCACCATGC
 
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JMFF047A23+           CGGCGATGGATCCGGCGACCATGAACTCCCAGAAGCGGAGCCCGTC              
JMSF020D08+           CGGCGATTGACCCGGCCACCATGAACTGCCAGAAGTGGAGCCCGTCGTGCGCCGCCGAGA
                      ____________________________________________________________
consensus             CGGCGATTGATCCGGCGACCATGAACTGCCAGAAGTGGAGCCCGTCGTGCGCCGCCGAGA
 
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JMSF020D08+           CGACGACCTCCGGGTGAAAATCCGGCGGAATGAGCTCCGGCTGCTGAAACTTGGCAGATG
                      ____________________________________________________________
consensus             CGACGACCTCCGGGTGAAAATCCGGCGGAATGAGCTCCGGCTGCTGAAACTTGGCAGATG
 
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JMSF020D08+           CATCGGTAGCCATGGCAAAAAAACAAAACTGAGAGATTCACAAATTCAGCTTTCAGAAGA
                      ____________________________________________________________
consensus             CATCGGTAGCCATGGCAAAAAAACAAAACTGAGAGATTCACAAATTCAGCTTTCAGAAGA
 
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JMSF020D08+           CTATACTGACAATTCAAGTCGGATACGGGTCTTTGATGGATCTATGGAGCTCCGCCATAC
                      ____________________________________________________________
consensus             CTATACTGACAATTCAAGTCGGATACGGGTCTTTGATGGATCTATGGAGCTCCGCCATAC
 
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JMSF020D08+           AATCTCGAATCGAATCAGCGATAGATATGCTATATATATAGAGAGTGAAATTGGTATCTG
                      ____________________________________________________________
consensus             AATCTCGAATCGAATCAGCGATAGATATGCTATATATATAGAGAGTGAAATTGGTATCTG
 
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JMSF020D08+           TTTGTGATTAGGATTTGGGCGACGACGGCGATTGCGTGATGCAATTGTGTAGAATAGTCC
                      ____________________________________________________________
consensus             TTTGTGATTAGGATTTGGGCGACGACGGCGATTGCGTGATGCAATTGTGTAGAATAGTCC