Contig 005054:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019I02Sequence382005054 (2)ref|XP_011085873.1|8e-09PREDICTED: aspartic proteinase PCS1 [Sesamum indicum]704000309 (3)ref|XP_009763373.1|4e-98PREDICTED: aspartic proteinase PCS1-like [Nicotiana sylvestris]
JMSF034C16Sequence379005054 (2)ref|XP_009586764.1|1e-06PREDICTED: aspartic proteinase PCS1-like [Nicotiana tomentosiformis]716020447ref|XP_009763373.1|2e-98PREDICTED: aspartic proteinase PCS1-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF034C16+                                             GGCGTCCCGATGGGGAGAGTGACCAC
JMSF019I02+                                             GGCGTCCCGATGGGGAGAGTGACCAC
                      ____________________________________________________________
consensus                                               GGCGTCCCGATGGGGAGAGTGACCAC
 
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JMSF034C16+           CAGCGCCATCGAATANTTAAAACTCGACTTATANTTCAAAGACCGCGTCNCCGCCGCCGA
JMSF019I02+           CAGCGCCATCGAATACTTAAAACTCGACTTATAATTCAAAGACCGCGTCCCCGCCGCCGA
                      ____________________________________________________________
consensus             CAGCGCCATCGAATACTTAAAACTCGACTTATAATTCAAAGACCGCGTCCCCGCCGCCGA
 
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JMSF034C16+           CCCTCGGGGGACCANTCNTTTACCCATCNGAGANGACGCAAAAACCTTCCGCGCAGAAGA
JMSF019I02+           CCCTCGGGGGACCANTCGTTTACCCATCAGAGACGACGCAAAAACCTTCCGCGCAGAAGA
                      ____________________________________________________________
consensus             CCCTCGGGGGACCANTCGTTTACCCATCAGAGACGACGCAAAAACCTTCCGCGCAGAAGA
 
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JMSF034C16+           GCCGCCGCGCGCGATAGGAACGGAAGTGAGAGGGAACGAAGCAGAAAAAGACCCGCTCTT
JMSF019I02+           GCCGCCGCGCGCGATAGGAACGGAAGTGAGAGGGAACGAAGCAGAAAAAGACCCGCTCTT
                      ____________________________________________________________
consensus             GCCGCCGCGCGCGATAGGAACGGAAGTGAGAGGGAACGAAGCAGAAAAAGACCCGCTCTT
 
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JMSF034C16+           TCCATGAGCCGCAAAACTTGAAAGGAAATTCANGAAGAAGAGAGATAGAAGCANGAAAGA
JMSF019I02+           TCCATGAGCCGCAAAACTTGAAAGGAAATTCAAGAAGAAGAGAGATAGAAGCAAGAAAGA
                      ____________________________________________________________
consensus             TCCATGAGCCGCAAAACTTGAAAGGAAATTCAAGAAGAAGAGAGATAGAAGCAAGAAAGA
 
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JMSF034C16+           GGCAAAGGAAGCCATGGGAGATGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG
JMSF019I02+           GGCAAAGGAAGCCATGGGAGATGC----AGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG
                      ____________________________________________________________
consensus             GGCAAAGGAAGCCATGGGAGATGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG
 
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JMSF034C16+           TAGGTAGGGTTTTATCACAGGCAATATTAGGGCGAACCCAAGAAGAAGCTAT        
JMSF019I02+           TAGGTAGGGTTTTATCACAGGCAATATTAGGGCGAACCCAAGAAGAAGCTATGGAGAGTT
                      ____________________________________________________________
consensus             TAGGTAGGGTTTTATCACAGGCAATATTAGGGCGAACCCAAGAAGAAGCTATGGAGAGTT