Contig 005049:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014A01Sequence502005049 (5)ref|XP_010324505.1|2e-28PREDICTED: beta-amylase 8 isoform X5 [Solanum lycopersicum]
JMSF018P10Sequence342005049 (5)ref|XP_004244442.1|3e-12PREDICTED: beta-amylase 8 isoform X2 [Solanum lycopersicum]149002865 (5)
JMSF024E09Sequence726005049 (5)ref|XP_004244442.1|2e-67PREDICTED: beta-amylase 8 isoform X2 [Solanum lycopersicum]677002865 (5)ref|XP_006361593.1|4e-69PREDICTED: beta-amylase 8-like, partial [Solanum tuberosum]
JMSF025L13Sequence704005049 (5)ref|XP_010324502.1|1e-63PREDICTED: beta-amylase 8 isoform X1 [Solanum lycopersicum]282002865 (5)
JMSF030D13Sequence708005049 (5)ref|XP_004244442.1|2e-64PREDICTED: beta-amylase 8 isoform X2 [Solanum lycopersicum]471002865 (5)ref|XP_010324505.1|3e-18PREDICTED: beta-amylase 8 isoform X5 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF024E09+                                                            ANTGTTAATTA
                      ____________________________________________________________
consensus                                                              ANTGTTAATTA
 
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JMSF024E09+           TGCCACTAGAAAGCATGACATAGACAGGAACATATGGAGTTCCTAAAAAATCATGTCCAT
                      ____________________________________________________________
consensus             TGCCACTAGAAAGCATGACATAGACAGGAACATATGGAGTTCCTAAAAAATCATGTCCAT
 
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JMSF025L13+                                       CTGATCAGCCTCTAAACATCCTGATGAATTCA
JMSF030D13+                                       CTGATCAGCCTCTAAACATCCTGATGAATTCA
JMSF024E09+           GCTCTCCCGTATGGACTTCTTGCATAAGCTGATCAGCCTCTAAACATCCTGATGAATTCA
                      ____________________________________________________________
consensus             GCTCTCCCGTATGGACTTCTTGCATAAGCTGATCAGCCTCTAAACATCCTGATGAATTCA
 
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JMSF025L13+           TGGGGCTGCTACTTGTGTACTTATCAGCCTTTGCACCCGTATCTGGTACAACAACAGAAT
JMSF030D13+           TGGGGCTGCTACTTGTGTACTTATCAGCCTTTGCACCCGTATCTGGTACAACAACAGAAT
JMSF024E09+           TGGGGCTGCTACTTGTGTACTTATCAGCCTTTGCACCCGTATCTGGTACAACAACAGAAT
                      ____________________________________________________________
consensus             TGGGGCTGCTACTTGTGTACTTATCAGCCTTTGCACCCGTATCTGGTACAACAACAGAAT
 
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JMSF025L13+           CAAAACTAGCTGGAGACAAGCTCTCATCAATTCTAAGAACTGATGCCTCTATCGATGCAC
JMSF030D13+           CAAAACTAGCTGGAGACAAGCTCTCATCAATTCTAAGAACTGATGCCTCTATCGATGCAC
JMSF024E09+           CAAAACTAGCTGGAGACAAGCTCTCATCAATTCTAAGAACTGATGCCTCTATCGATGCAC
JMSF014A01+                                           CTAAGAACTGATGCCTCTATCGATGCAC
                      ____________________________________________________________
consensus             CAAAACTAGCTGGAGACAAGCTCTCATCAATTCTAAGAACTGATGCCTCTATCGATGCAC
 
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JMSF025L13+           TTGTTGAGCAATTTTTCAAAGAATCAGCAGGAAGTGGATTCCCAACCACCCTCGCTGGAT
JMSF030D13+           TTGTTGAGCAATTTTTCAAAGAATCAGCAGGAAGTGGATTCCCAACCACCCTCGCTGGAT
JMSF024E09+           TTGTTGAGCAATTTTTCAAAGAATCAGCAGGAAGTGGATTCCCAACCACCCTCGCTGGAT
JMSF014A01+           TTGTTGAGCAATTTTTCAAAGAATCAGCAGGAAGTGGATTCCCAACCACCCTCGCTGGAT
                      ____________________________________________________________
consensus             TTGTTGAGCAATTTTTCAAAGAATCAGCAGGAAGTGGATTCCCAACCACCCTCGCTGGAT
 
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JMSF025L13+           AAGGCACCACGTTAGAAGGAGCTGCCGGTCTATAAGTGTTGCCATCGGGCTCGACGGTAA
JMSF030D13+           AAGGCACCACGTTAGAAGGAGCTGCCGGTCTATAAGTGTTGCCATCGGGCTCGACGGTAA
JMSF024E09+           AAGGCACCACGTTAGAAGGAGCTGCCGGTCTATAAGTGTTGCCATCGGGCTCGACGGTAA
JMSF014A01+           AAGGCACCACGTTAGAAGGAGCTGCCGGTCTATAAGTGTTGCCATCGGGCTCGACGGTAA
                      ____________________________________________________________
consensus             AAGGCACCACGTTAGAAGGAGCTGCCGGTCTATAAGTGTTGCCATCGGGCTCGACGGTAA
 
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JMSF025L13+           AACCGGCCTGGCGGGCGAGGGCAGAGAGGACGTCATTCATGTCAGAACGGGGCGGGAGGT
JMSF030D13+           AACCGGCCTGGCGGGCGAGGGCAGAGAGGACGTCATTCATGTCAGAACGGGGCGGGAGGT
JMSF024E09+           AACCGGCCTGGCGGGCGAGGGCAGAGAGGACGTCATTCATGTCAGAACGGGGCGGGAGGT
JMSF014A01+           AACCGGCCTGGCGGGCGAGGGCAGAGAGGACGTCATTCATGTCAGAACGGGGCGGGAGGT
JMSF018P10+                             GGGCAGAGAGGACGTCATTCATGTCAGAACGGGGCGGGAGGT
                      ____________________________________________________________
consensus             AACCGGCCTGGCGGGCGAGGGCAGAGAGGACGTCATTCATGTCAGAACGGGGCGGGAGGT
 
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JMSF025L13+           CGAAATTGCCGTACTGGCGGAGGCCGGCCATCATCCGGGAAGTGAAGGCCCGGCGATCGC
JMSF030D13+           CGAAATTGCCGTACTGGCGGAGGCCGGCCATCATCCGGGAAGTGAAGGCCCGGCGATCGC
JMSF024E09+           CGAAATTGCCGTACTGGCGGAGGCCGGCCATCATCCGGGAAGTGAAGGCCCGGCGATCGC
JMSF014A01+           CGAAATTGCCGTACTGGCGGAGGCCGGCCATCATCCGGGAAGTGAAGGCCCGGCGATCGC
JMSF018P10+           CGAAATTGCCGTACTGGCGGAGGCCGGCCATCATCCGGGAAGTGAAGGCCCGGCGATCGC
                      ____________________________________________________________
consensus             CGAAATTGCCGTACTGGCGGAGGCCGGCCATCATCCGGGAAGTGAAGGCCCGGCGATCGC
 
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JMSF025L13+           GCTCGCGAAACTTGGTGCGCTCCTTCTGTTTCTCTCTCTCCTTCCTGCTCTTGTTGGCAG
JMSF030D13+           GCTCGCGAAACTTGGTGCGCTCCTTCTGTTTCTCTCTCTCCTTCCTGCTCTTGTTGGCAG
JMSF024E09+           GCTCGCGAAACTTGGTGCGCTCCTTCTGTTTCTCTCTCTCCTTCCTGCTCTTGTTGGCAG
JMSF014A01+           GCTCGCGAAACTTGGTGCGCTCCTTCTGTTTCTCTCTCTCCTTCCTGCTCTTGTTGGCAG
JMSF018P10+           GCTCGCGAAACTTGGTGCGCTCCTTCTGTTTCTCTCTCTCCTTCCTGCTCTTGTTGGCAG
                      ____________________________________________________________
consensus             GCTCGCGAAACTTGGTGCGCTCCTTCTGTTTCTCTCTCTCCTTCCTGCTCTTGTTGGCAG
 
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JMSF025L13+           TAGCAGAGGCAGCGTTGCCGGCCATTCTGGCGGCAAAGCCACGAGGACGGCGGGAGGCCG
JMSF030D13+           TAGCAGAGGCAGCGTTGCCGGCCATTCTGGCGGCAAAGCCACGAGGACGGCGGGAGGCCG
JMSF024E09+           TAGCAGAGGCAGCGTTGCCGGCCATTCTGGCGGCAAAGCCACGAGGACGGCGGGAGGCCG
JMSF014A01+           TAGCAGAGGCAGCGTTGCCGGCCATTCTGGCGGCAAAGCCACGAGGACGGCGGGAGGCCG
JMSF018P10+           TAGCAGAGGCAGCGTTGCCGGCCATTCTGGCGGCAAAGCCACGAGGACGGCGGGAGGCCG
                      ____________________________________________________________
consensus             TAGCAGAGGCAGCGTTGCCGGCCATTCTGGCGGCAAAGCCACGAGGACGGCGGGAGGCCG
 
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JMSF025L13+           GTTGGGGTCGGGGATTAGGGTTCGAATTCCGGTCATAGTTCGGGTTCGGGTTCGGGTTCT
JMSF030D13+           GTTGGGGTCGGGGATTAGGGTTCGAATTCCGGTCATAGTTCGGGTTCGGGTTCGGGTTCT
JMSF024E09+           GTTGGGGTCGGGGATTAGGGTTCGAATTCCGGTCATAGTTCGGGTTCGGGTTCGGGTTCT
JMSF014A01+           GTTGGGGTCGGGGATTAGGGTTCGAATTCCGGTCATAGTTCGGGTTCGGGTTCGGGTTCT
JMSF018P10+           GTTGGGGTCGGGGATTAGGGTTCGAATTCCGGTCATAGTTCGGGTTCGGGTTCGGGTTCT
                      ____________________________________________________________
consensus             GTTGGGGTCGGGGATTAGGGTTCGAATTCCGGTCATAGTTCGGGTTCGGGTTCGGGTTCT
 
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JMSF025L13+           GGGAATCCATAGCTTGGGCTTGGAAGGGGCGGTTTCACCTAGCTCCTCCAC         
JMSF030D13+           GGGAATCCATAGCTTGGGCTTGGAAGGGGCGGTTTCACCTAGCTCCTCC           
JMSF024E09+           GGGAATCCATAGCTTGGGCTTGGAAGGGGCGGTTTCACCTAGCTCCTCCAC         
JMSF014A01+           GGGAATCCATAGCTTGGGCTTGGAAGGGGCGGTTTCACCTAGCTCCTCCACAC       
JMSF018P10+           GGGAATCCATAGCTTGGGCTTGGAAGGGGCGGTTTCACCTAGCTCCTCCACACTCCATGC
                      ____________________________________________________________
consensus             GGGAATCCATAGCTTGGGCTTGGAAGGGGCGGTTTCACCTAGCTCCTCCACACTCCATGC