Contig 005045:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001B22Sequence297005045 (4)728001258 (4)emb|CAN74426.1|1e-22hypothetical protein VITISV_010983 [Vitis vinifera]
JMSF018G09Sequence447005045 (4)
JMSF037D08Sequence678005045 (4)ref|XP_011086564.1|4e-43PREDICTED: cyclin-T1-3-like [Sesamum indicum]794001258 (4)emb|CAN74426.1|2e-25hypothetical protein VITISV_010983 [Vitis vinifera]
JMSF038K05Sequence703005045 (4)ref|XP_011086564.1|3e-48PREDICTED: cyclin-T1-3-like [Sesamum indicum]928001258 (4)emb|CAN74426.1|2e-66hypothetical protein VITISV_010983 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037D08+ TGACGAAGA
JMSF038K05+ CCTCCTATCANTTTTTGAATGGGATTGACGAAGA
                      ____________________________________________________________
consensus CCTCCTATCANTTTTTGAATGGGATTGACGAAGA
 
. : . : . : . : . : . :
JMSF037D08+ AAGAAACGATGGCAAAATATTATTGCCGTAGCAATGGTTACCTGAGGCACTTTAAGTCTC
JMSF038K05+ AAGAAACGATGGCAAAATATTATTGCCGTAGCAATGGTTACCTGAGGCACTTTAAGTCTC
                      ____________________________________________________________
consensus AAGAAACGATGGCAAAATATTATTGCCGTAGCAATGGTTACCTGAGGCACTTTAAGTCTC
 
. : . : . : . : . : . :
JMSF037D08+ ATGCCCAAATCTTGTAAAAATGTACAATATGATTTGCGCAGGTAAGTCTCCTTCTTTAAA
JMSF038K05+ ATGCCCAAATCTTGTAAAAATGTACAATATGATTTGCGCAGGTAAGTCTCCTTCTTTAAA
                      ____________________________________________________________
consensus ATGCCCAAATCTTGTAAAAATGTACAATATGATTTGCGCAGGTAAGTCTCCTTCTTTAAA
 
. : . : . : . : . : . :
JMSF037D08+ TCAATGCCATCTTGTCTAGAGGGAGAATTTTCTTCAATCTCCCTCCTAGAGAAATACCAA
JMSF038K05+ TCAATGCCATCTTGTCTAGAGGGAGAATTTTCTTCAATCTCCCTCCTAGAGAAATACCAA
                      ____________________________________________________________
consensus TCAATGCCATCTTGTCTAGAGGGAGAATTTTCTTCAATCTCCCTCCTAGAGAAATACCAA
 
. : . : . : . : . : . :
JMSF037D08+ CTGCCACCACCTTCCTCAGTGTTTTCTTGAGATCCAGCATCATATGAACCATGGTGCGAG
JMSF038K05+ CTGCCACCACCTTCCTCAGTGTTTTCTTGAGATCCAGCATCATATGAACCATGGTGCGAG
                      ____________________________________________________________
consensus CTGCCACCACCTTCCTCAGTGTTTTCTTGAGATCCAGCATCATATGAACCATGGTGCGAG
 
. : . : . : . : . : . :
JMSF037D08+ GGATCAGCAGCCAATGTAGAAGCCATAGACAACTCTTAAATAGCGTATCTTGCAGACTAA
JMSF038K05+ GGATCAGCAGCCAATGTAGAAGCCATAGACAACTCTTAAATAGCGTATCTTGCAGACTAA
                      ____________________________________________________________
consensus GGATCAGCAGCCAATGTAGAAGCCATAGACAACTCTTAAATAGCGTATCTTGCAGACTAA
 
. : . : . : . : . : . :
JMSF037D08+ CCACCGACGATCAGAGTAAACAAAAGTTACTCTAATACGAAAGAAACTGTTTTTAGGTGT
JMSF038K05+ CCACCGACGATCAGAGTAAACAAAAGTTACTCTAATACGAAAGAAACTGTTTTTAGGTGT
                      ____________________________________________________________
consensus CCACCGACGATCAGAGTAAACAAAAGTTACTCTAATACGAAAGAAACTGTTTTTAGGTGT
 
. : . : . : . : . : . :
JMSF037D08+ TTACTTTTACTCACAAAGAATAAAAATGACTGAGGGGGTCAAAATTTAGGGTTTTCCCCA
JMSF038K05+ TTACTTTTACTCACAAAGAATAAAAATGACTGAGGGGGTCAAAATTTAGGGTTTTCCCCA
                      ____________________________________________________________
consensus TTACTTTTACTCACAAAGAATAAAAATGACTGAGGGGGTCAAAATTTAGGGTTTTCCCCA
 
. : . : . : . : . : . :
JMSF037D08+ AAATTAAGCAAAACCTGACTGAGGTCAGCAAAAATACAATCGAAGATAATTGAGCCCCGA
JMSF038K05+ AAATTAAGCAAAACCTGACTGAGGTCAGCAAAAATACAATCGAAGATAATTGAGCCCCGA
JMSF001B22+ ACCTGACTGAGGTCAGCAAAAATACAATCGAAGATAATTGAGCCCCGA
JMSF018G09+ ACCTGACTGAGGTCAGCAAAAATACAATCGAAGATAATTGAGCCCCGA
                      ____________________________________________________________
consensus AAATTAAGCAAAACCTGACTGAGGTCAGCAAAAATACAATCGAAGATAATTGAGCCCCGA
 
. : . : . : . : . : . :
JMSF037D08+ AAGAAACCCAAAATCGAAGCCCTAATAACAAACCAAAAAAAATGATTTAAAAAGAATATA
JMSF038K05+ AAGAAACCCAAAATCGAAGCCCTAATAACAAACCAAAAAAAATGATTTAAAAAGAATATA
JMSF001B22+ AAGAAACCCAAAATCGAAGCCCTAATAACAAACCAAAAAAAATGATTTAAAAAGAATATA
JMSF018G09+ AAGAAACCCAAAATCGAAGCCCTAATAACAAACCAAAAAAAATGATTTAAAAAGAATATA
                      ____________________________________________________________
consensus AAGAAACCCAAAATCGAAGCCCTAATAACAAACCAAAAAAAATGATTTAAAAAGAATATA
 
. : . : . : . : . : . :
JMSF037D08+ AGTGTTCAGACGCCTTCTGTGCGGAGCAGATAGCGTCTTCTTCTTCAACTTTACGCCTGC
JMSF038K05+ AGTGTTCAGACGCCTTCTGTGCGGAGCAGATAGCGTCTTCTTCTTCAACTTTACGCCTGC
JMSF001B22+ AGTGTTCAGACGCCTTCTGTGCGGAGCAGATAGCGTCTTCTTCTTCAACTTTACGCCTGC
JMSF018G09+ AGTGTTCAGACGCCTTCTGTGCGGAGCAGATAGCGTCTTCTTCTTCAACTTTACGCCTGC
                      ____________________________________________________________
consensus AGTGTTCAGACGCCTTCTGTGCGGAGCAGATAGCGTCTTCTTCTTCAACTTTACGCCTGC
 
. : . : . : . : . : . :
JMSF037D08+ GACATTGAAGCCAGCAATCGATTGATTGAAGCGAGCGGTAGGGAGCTGCGGAGTGGGTGA
JMSF038K05+ GACATTGAAGCCAGCAATCGATTGATTGAAGCGAGCGGTAGGGAGCTGCGGAGTGGGTGA
JMSF001B22+ GACATTGAAGCCAGCAATCGATTGATTGAAGCGAGCGGTAGGGAGCTGCGGAGTGGGTGA
JMSF018G09+ GACATTGAAGCCAGCAATCGATTGATTGAAGCGAGCGGTAGGGAGCTGCGGAGTGGGTGA
                      ____________________________________________________________
consensus GACATTGAAGCCAGCAATCGATTGATTGAAGCGAGCGGTAGGGAGCTGCGGAGTGGGTGA
 
. : . : . : . : . : . :
JMSF037D08+ C
JMSF038K05+ C
JMSF001B22+ C
JMSF018G09+ CTCGACTCGCTCGAGGGATAGAAGCAAGGGACAAATATACTGAGACGGGATAGAATTAAC
                      ____________________________________________________________
consensus CTCGACTCGCTCGAGGGATAGAAGCAAGGGACAAATATACTGAGACGGGATAGAATTAAC