Contig 005043:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018B17Sequence231005043 (2)770011299 (3)ref|XP_009772093.1|333PREDICTED: uncharacterized protein LOC104222551 [Nicotiana sylvestris]
JMSF032J24Sequence706005043 (2)ref|XP_009589511.1|236PREDICTED: uncharacterized protein LOC104086873 [Nicotiana tomentosiformis]663011299 (3)gb|EYU42061.1|1e-95hypothetical protein MIMGU_mgv1a006990mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF032J24+ AACAAGTGGTACATTTCCAATATTCCCTATTCCAATTTGTATAATA
                      ____________________________________________________________
consensus AACAAGTGGTACATTTCCAATATTCCCTATTCCAATTTGTATAATA
 
. : . : . : . : . : . :
JMSF032J24+ GTAAACTTGAAAAATGGATACGGTGGACGGACGATTGTTGCAACAACTAGACCTATTATG
                      ____________________________________________________________
consensus GTAAACTTGAAAAATGGATACGGTGGACGGACGATTGTTGCAACAACTAGACCTATTATG
 
. : . : . : . : . : . :
JMSF032J24+ GAGCCTGATATTGTGGCAATGACAACATTAACAGGGATAAACCACCACTGAAGCATCTTC
                      ____________________________________________________________
consensus GAGCCTGATATTGTGGCAATGACAACATTAACAGGGATAAACCACCACTGAAGCATCTTC
 
. : . : . : . : . : . :
JMSF032J24+ TCGAATGTGATTGCTTGCCCAAGTTGAGAGAATATCAGGCATGGGAGCAATAGTGAAAAG
                      ____________________________________________________________
consensus TCGAATGTGATTGCTTGCCCAAGTTGAGAGAATATCAGGCATGGGAGCAATAGTGAAAAG
 
. : . : . : . : . : . :
JMSF032J24+ ACCAACCCATTTAAAAGCTTTCTTCCATTTGCAGGCAAGATATTAACATACTTGGAAGCC
                      ____________________________________________________________
consensus ACCAACCCATTTAAAAGCTTTCTTCCATTTGCAGGCAAGATATTAACATACTTGGAAGCC
 
. : . : . : . : . : . :
JMSF032J24+ ATGAGAAATCCCAGGAAACACATCGTGAAAACTTTAGCTATAGGTAAGACTGCAATCTTG
                      ____________________________________________________________
consensus ATGAGAAATCCCAGGAAACACATCGTGAAAACTTTAGCTATAGGTAAGACTGCAATCTTG
 
. : . : . : . : . : . :
JMSF032J24+ ATAGAACCAAGCAAGGATGTCCCTCCACCTTGAGATTCTGTGAGAATCTCCATAAGCAAC
                      ____________________________________________________________
consensus ATAGAACCAAGCAAGGATGTCCCTCCACCTTGAGATTCTGTGAGAATCTCCATAAGCAAC
 
. : . : . : . : . : . :
JMSF032J24+ CTCTGCACCCTATCCATCATACTATGAAAAAATCTCTTAAACTCTCCCTAAGATGAAGTA
                      ____________________________________________________________
consensus CTCTGCACCCTATCCATCATACTATGAAAAAATCTCTTAAACTCTCCCTAAGATGAAGTA
 
. : . : . : . : . : . :
JMSF032J24+ ATTGGCTTTCCCGGTCACCCGAGGGGAAAAGGACCTGCTCTTAGTAGTAAGCCACCAGAA
JMSF018B17+ CCCGGTCACCCGAGGGGAAAAGGACCTGCTCTTAGTAGTAAGCCACCAGAA
                      ____________________________________________________________
consensus ATTGGCTTTCCCGGTCACCCGAGGGGAAAAGGACCTGCTCTTAGTAGTAAGCCACCAGAA
 
. : . : . : . : . : . :
JMSF032J24+ ACAATTCGCATACAATGTTCTCCAATCAAAACAACTGAATCCCAAACAGCTCAGATTCTT
JMSF018B17+ ACAATTCGCATACAATGTTCTCCAATCAAAACAACTGAATCCCAAACAGCTCAGATTCTT
                      ____________________________________________________________
consensus ACAATTCGCATACAATGTTCTCCAATCAAAACAACTGAATCCCAAACAGCTCAGATTCTT
 
. : . : . : . : . : . :
JMSF032J24+ CAGCCCAGAAACGCCAGATACTCCACCACCTAACCTTTATCCCCGTTAATACGTAAGGTC
JMSF018B17+ CAGCCCAGAAACGCCAGATACTCCACCACCTAACCTTTATCCCCGTTAATACGTAAGGTC
                      ____________________________________________________________
consensus CAGCCCAGAAACGCCAGATACTCCACCACCTAACCTTTATCCCCGTTAATACGTAAGGTC
 
. : . : . : . : . : . :
JMSF032J24+ TTGGCGAAAAGACTGGAGACGAATCTCGAATACTTGAGCTGCGGTTGGGACGATGAATTC
JMSF018B17+ TTGGCGAAAAGACTGGAGACGAATCTCGAATACTTGAGCTGCGGTTGGGACGATGAATTC
                      ____________________________________________________________
consensus TTGGCGAAAAGACTGGAGACGAATCTCGAATACTTGAGCTGCGGTTGGGACGATGAATTC