clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF016G01 | Sequence | 216 | 005033 (3) | 747 | 019279 | ref|XP_009795831.1| | 6e-94 | PREDICTED: serine carboxypeptidase-like 18 isoform X2 [Nicotiana sylvestris] | |||
JMSF021H20 | Sequence | 696 | 005033 (3) | ref|XP_009795830.1| | 2e-86 | PREDICTED: serine carboxypeptidase-like 18 isoform X1 [Nicotiana sylvestris] | 775 | 001498 (2) | ref|XP_009795831.1| | 1e-80 | PREDICTED: serine carboxypeptidase-like 18 isoform X2 [Nicotiana sylvestris] |
JMSF050K11 | Sequence | 694 | 005033 (3) | ref|XP_009795830.1| | 7e-87 | PREDICTED: serine carboxypeptidase-like 18 isoform X1 [Nicotiana sylvestris] | 775 | 001498 (2) | ref|XP_009795831.1| | 7e-80 | PREDICTED: serine carboxypeptidase-like 18 isoform X2 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF050K11+ GATGAGCA
JMSF021H20+ TCGATGAGCA
____________________________________________________________
consensus TCGATGAGCA
. : . : . : . : . : . :
JMSF050K11+ TACATGACTCTATTATTGTNGTCTGCATATTGGTCGGTCACTGGATTGCCTTCCACATAT
JMSF021H20+ TACATGACTCTATTANTGTTGTCTGCATATTGGTCGGTCACTGGATTGCCTTCCACATAT
____________________________________________________________
consensus TACATGACTCTATTATTGTTGTCTGCATATTGGTCGGTCACTGGATTGCCTTCCACATAT
. : . : . : . : . : . :
JMSF050K11+ CCTTTCAAGTTTAGATGTGGCTCAATTCCAGATTCTAAACCATCATATATTTTGTGAACA
JMSF021H20+ CCTTTCAAGTTTAGATGTGGCTCAATTCCAGATTCTAAACCATCATATATTTTGTGAACA
____________________________________________________________
consensus CCTTTCAAGTTTAGATGTGGCTCAATTCCAGATTCTAAACCATCATATATTTTGTGAACA
. : . : . : . : . : . :
JMSF050K11+ ACCAGCGGAATAATGATTCCAGCATAGGAATCACCTGCAATGTACAATGAGTTGCTAAGG
JMSF021H20+ ACCAGCGGAATAATGATTCCAGCATAGGAATCACCTGCAATGTACAATGAGTTGCTAAGG
____________________________________________________________
consensus ACCAGCGGAATAATGATTCCAGCATAGGAATCACCTGCAATGTACAATGAGTTGCTAAGG
. : . : . : . : . : . :
JMSF050K11+ AATTTCGGGTGGTCCAGGAGCCACCCTCTGAGGAAACTATAAGCAAGTTGTGCGGATAGT
JMSF021H20+ AATTTCGGGTGGTCCAGGAGCCACCCTCTGAGGAAACTATAAGCAAGTTGTGCGGATAGT
____________________________________________________________
consensus AATTTCGGGTGGTCCAGGAGCCACCCTCTGAGGAAACTATAAGCAAGTTGTGCGGATAGT
. : . : . : . : . : . :
JMSF050K11+ GTATCATTACACATGTAAGCTTCCCATGTTTTGTCATAGGAGAATCCTGTTCCAACTGGT
JMSF021H20+ GTATCATTACACATGTAAGCTTCCCATGTTTTGTCATAGGAGAATCCTGTTCCAACTGGT
____________________________________________________________
consensus GTATCATTACACATGTAAGCTTCCCATGTTTTGTCATAGGAGAATCCTGTTCCAACTGGT
. : . : . : . : . : . :
JMSF050K11+ TGGTCCAAAAATATAATGTTGGCCACCTTGGTCCACGCATACTGGTTCAACTCCAAAGTT
JMSF021H20+ TGGTCCAAAAATATAATGTTGGCCACCTTGGTCCACGCATACTGGTTCAACTCCAAAGTT
____________________________________________________________
consensus TGGTCCAAAAATATAATGTTGGCCACCTTGGTCCACGCATACTGGTTCAACTCCAAAGTT
. : . : . : . : . : . :
JMSF050K11+ GGGATGTCTCCAGTGGAATTTGCATAATTAATTCTCAAAGGACCTATCTCATAGAGGAGG
JMSF021H20+ GGGATGTCTCCAGTGGAATTTGCATAATTAATTCTCAAAGGACCTATCTCATAGAGGAGG
____________________________________________________________
consensus GGGATGTCTCCAGTGGAATTTGCATAATTAATTCTCAAAGGACCTATCTCATAGAGGAGG
. : . : . : . : . : . :
JMSF050K11+ CTAGAGAGACCAGAGCAGCCTGGGCCTCCAGCGAGCCAGAGAAAGAGCGGGTCACTTTCT
JMSF021H20+ CTAGAGAGACCAGAGCAGCCTGGGCCTCCAGCGAGCCAGAGAAAGAGCGGGTCACTTTCT
____________________________________________________________
consensus CTAGAGAGACCAGAGCAGCCTGGGCCTCCAGCGAGCCAGAGAAAGAGCGGGTCACTTTCT
. : . : . : . : . : . :
JMSF050K11+ GGGCTATTCTCAGATTCAATGAAGTAGTAAAACAGTTGAACTTGTTGAAATTCTCCCACA
JMSF021H20+ GGGCTATTCTCAGATTCAATGAAGTAGTAAAACAGTTGAACTTGTTGAAATTCTCCCACA
____________________________________________________________
consensus GGGCTATTCTCAGATTCAATGAAGTAGTAAAACAGTTGAACTTGTTGAAATTCTCCCACA
. : . : . : . : . : . :
JMSF050K11+ CCTATGTAACCAGTTTCGAGCTTGAATGGAAGTTTTCCTGGGAATCCAGGTAAAGTGTCA
JMSF021H20+ CCTATGTAACCAGTTTCGAGCTTGAATGGAAGTTTTCCTGGGAATCCAGGTAAAGTGTCA
JMSF016G01+ AATGGAAGTTTTCCTGGGAAACCAGGTAAAGTGTCA
____________________________________________________________
consensus CCTATGTAACCAGTTTCGAGCTTGAATGGAAGTTTTCCTGGGAATCCAGGTAAAGTGTCA
. : . : . : . : . : . :
JMSF050K11+ ACCACTGAATGTGAAAATGATCGAGCCAAAAACAG
JMSF021H20+ ACCACTGAATGTGAAAATGATCGAGCCAAAAACAGGAGTAGCAACAGAAGGATTTCCATT
JMSF016G01+ ACCACTGTATGTGAAAACGTTGTAGCCGAAAATAGGAGTAGCAATACAAGGATTTTCAAT
____________________________________________________________
consensus ACCACTGAATGTGAAAATGATCGAGCCAAAAACAGGAGTAGCAATAGAAGGATTTTCATT
. : . : . : . : . : . :
JMSF021H20+ GGTGAGGCCATGA
JMSF016G01+ GTTGAGGCCATGAGAGGGCTTCTCCAGCCTACACTGCTACAAGTCTGCTACTATACTCTA
____________________________________________________________
consensus GTTGAGGCCATGAGAGGGCTTCTCCAGCCTACACTGCTACAAGTCTGCTACTATACTCTA
. : . : . : . : . : . :
JMSF016G01+ TTATCTTGAATGCATATGGCTGGTAGGTATGGTGTGTATAGTGTTTAGTTCTTACTTTCA
____________________________________________________________
consensus TTATCTTGAATGCATATGGCTGGTAGGTATGGTGTGTATAGTGTTTAGTTCTTACTTTCA