Contig 005015:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021O07Sequence538005015 (4)emb|CDO97109.1|4e-75unnamed protein product [Coffea canephora]658007070 (3)emb|CDO97108.1|2e-70unnamed protein product [Coffea canephora]
JMFF031F15Sequence371005015 (4)ref|XP_010255030.1|5e-42PREDICTED: allene oxide synthase-like [Nelumbo nucifera]
JMSF014E11Sequence510005015 (4)gb|KCW63866.1|4e-66hypothetical protein EUGRSUZ_G01535, partial [Eucalyptus grandis]781007070 (3)emb|CDO97108.1|2e-84unnamed protein product [Coffea canephora]
JMSF016P06Sequence471005015 (4)gb|KCW63866.1|9e-67hypothetical protein EUGRSUZ_G01535, partial [Eucalyptus grandis]740007070 (3)emb|CDO97108.1|3e-84unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF021O07+                                                                    AAA
                      ____________________________________________________________
consensus                                                                      AAA
 
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JMFF021O07+           CAAGAACTCGAAAGCCTTGACATCGTTAATGTCGTTGTAATTAGACTCCCCTGTCTTACC
JMSF016P06+                          CTTGACATCGTTAANGTCGTTGTAATTAGACTCCCCTGTCTTACC
                      ____________________________________________________________
consensus             CAAGAACTCGAAAGCCTTGACATCGTTAATGTCGTTGTAATTAGACTCCCCTGTCTTACC
 
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JMFF021O07+           CACCTCGTCCTCGATTTGCGCGAACATGTCGTCCGAGATACTAGAAAACAACGGGAGAAA
JMSF016P06+           CACCTCGTCCTCGATTTGCGCGAACATGTCGTCCGAGATACTAGAAAACAACGGGAGAAA
JMSF014E11+                                         GTCCGAGATACTAGAAAACAACGGGAGAAA
                      ____________________________________________________________
consensus             CACCTCGTCCTCGATTTGCGCGAACATGTCGTCCGAGATACTAGAAAACAACGGGAGAAA
 
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JMFF021O07+           CCTGTCGTGCAATTTTGCTAAGGTCTGGATGAACAGCCCCTTGACTGTGGCGTGTTTGGG
JMSF016P06+           CCTGTCGTGCAATTTTGCTAAGGTCTGGATGAACAGCCCCTTGACTGTGGCGTGTTTGGG
JMSF014E11+           CCTGTCGTGCAATTTTGCTAAGGTCTGGATGAACAGCCCCTTGACTGTGGCGTGTTTGGG
                      ____________________________________________________________
consensus             CCTGTCGTGCAATTTTGCTAAGGTCTGGATGAACAGCCCCTTGACTGTGGCGTGTTTGGG
 
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JMFF021O07+           CTCGGAGGGGTCGAGGTAGGCGCAGACACGGTAGCCGCCGGTGAACTTGGTGGACGACAT
JMSF016P06+           CTCGGAGGGGTCGAGGTAGGCGCAGACACGGTAGCCGCCGGTGAACTTGGTGGACGACAT
JMFF031F15+                                                       ACTTGGTGGACGACAT
JMSF014E11+           CTCGGAGGGGTCGAGGTAGGCGCAGACACGGTAGCCGCCGGTGAACTTGGTGGACGACAT
                      ____________________________________________________________
consensus             CTCGGAGGGGTCGAGGTAGGCGCAGACACGGTAGCCGCCGGTGAACTTGGTGGACGACAT
 
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JMFF021O07+           GTATGTACCGGTGAAGATATCCCTCTTCTCCACCTTGGAAACGTCGAACAAGATGGGGAA
JMSF016P06+           GTATGTACCGGTGAAGATATCCCTCTTCTCCACCTTGGAAACGTCGAACAAGATGGGGAA
JMFF031F15+           GTATGTNCCGGTGAAGATATCCCTNTTCTCCACCTNGGAAACGTCGAACAAGATGGGGAA
JMSF014E11+           GTATGTACCGGTGAAGATATCCCTCTTCTCCACCTTGGAAACGTCGAACAAGATGGGGAA
                      ____________________________________________________________
consensus             GTATGTACCGGTGAAGATATCCCTCTTCTCCACCTTGGAAACGTCGAACAAGATGGGGAA
 
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JMFF021O07+           GCT                                                         
JMSF016P06+           GCTAACCGAATCTAGCAGAACCACCACCTTGGGGTTTCCGGCCATGAAAGGACCGGGCGG
JMFF031F15+           GCTAACAGAATCTAGCAGAACCACCACCTTGGGGTTTCCGGCCATGAAAGGACCGGGCGG
JMSF014E11+           GCTAACCGAATCTAGCAGAACCACCACCTTGGGGTTTCCGGCCATGAAAGGACCGGGCGG
                      ____________________________________________________________
consensus             GCTAACCGAATCTAGCAGAACCACCACCTTGGGGTTTCCGGCCATGAAAGGACCGGGCGG
 
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JMSF016P06+           CATGTTGCATCTGAACACACTGGATTTATACTTCTCCTTTCTGCTCCTAAAGAACTCGTC
JMFF031F15+           CATGTTGCATCTGAACACACTGGATTTATACTTCTCCTTTCTGCTCNTAAAGAACTCGTC
JMSF014E11+           CATGTTGCATCTGAACACACTGGATTTATACTTCTCCTTTCTGCTCCTAAAGAACTCGTC
                      ____________________________________________________________
consensus             CATGTTGCATCTGAACACACTGGATTTATACTTCTCCTTTCTGCTCCTAAAGAACTCGTC
 
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JMSF016P06+           GGCGCCTTGGTTGTAGAAGAAGTCGTAGCGGTCGGCGATCGGGCCGAAAAACGGTAATCC
JMFF031F15+           GGCGCCTTGGTNGTAGAAGAAGTCGTAGCGGTCGGCGATCGGGCCGAAAAACGGTAATCC
JMSF014E11+           GGCGCCTTGGTTGTAGAAGAAGTCGTAGCGGTCGGCGATCGGGCCGAAAAACGGTAATCC
                      ____________________________________________________________
consensus             GGCGCCTTGGTTGTAGAAGAAGTCGTAGCGGTCGGCGATCGGGCCGAAAAACGGTAATCC
 
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JMSF016P06+           GTAGCC                                                      
JMFF031F15+           GTAGCCGCCGGGGATTTCCCGGAGGGGAAGGGTTTTAGAGTTATCGGACGATGACATTTT
JMSF014E11+           GTAGCCGCCGGGGATTTCCCGGAGGGGAAGGGTTTTAGAGTTATCGGACGATGACATTTT
                      ____________________________________________________________
consensus             GTAGCCGCCGGGGATTTCCCGGAGGGGAAGGGTTTTAGAGTTATCGGACGATGACATTTT
 
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JMFF031F15+           AGTTTTTCCGGCGGAGGTCAGATGAAAATATGAATTGAAGAAGACTACTTGTGAC     
JMSF014E11+           AGTTTTTCCGGCGGAGGTCAGATGAAAATATGAATTGAAGAAGACTACTTGTGACTTGTC
                      ____________________________________________________________
consensus             AGTTTTTCCGGCGGAGGTCAGATGAAAATATGAATTGAAGAAGACTACTTGTGACTTGTC