Contig 005011:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011O05Sequence610005011 (7)ref|XP_002512528.1|1e-94importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat119009679 (7)
JMFF029A01Sequence486005011 (7)ref|XP_002512528.1|4e-65importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat756009679 (7)ref|XP_007031183.1|3e-98Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform
JMFF041E14Sequence644005011 (7)ref|XP_002512528.1|3e-103importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat586021311ref|XP_007031183.1|9e-45Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform
JMFS134C01Sequence625005011 (7)ref|XP_002512528.1|7e-84importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat
JMSF012F04Sequence250005011 (7)ref|XP_002512528.1|5e-16importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat774009679 (7)ref|XP_007031183.1|3e-98Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform
JMSF013B24Sequence207005011 (7)ref|XP_009796205.1|6e-05PREDICTED: importin subunit alpha-1 [Nicotiana sylvestris]768009679 (7)ref|XP_007031183.1|3e-97Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform
JMSF053O15Sequence692005011 (7)ref|XP_002512528.1|1e-107importin alpha, putative [Ricinus communis] gb|EEF49980.1| importin alpha, putat777009679 (7)ref|XP_007031183.1|5e-118Importin alpha isoform 1 [Theobroma cacao] gb|EOY11685.1| Importin alpha isoform

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF053O15+ ATTGAGCTAGCAATGGCAAGAGTGCACCATACCAAGAACCAGATCCC
                      ____________________________________________________________
consensus ATTGAGCTAGCAATGGCAAGAGTGCACCATACCAAGAACCAGATCCC
 
. : . : . : . : . : . :
JMFF041E14+ ACAGGTTGGAGAATCACCAGCCACATTTCCCAAGGCCCAGACTGCCTGCTCACGAACAT
JMFF011O05+ AAGGCCCAGACTGCCTGCTCACGAACAT
JMSF053O15+ TACAGGTNGGAGAATCACCAGCCACATTTCCCAAGGCCCAGACTGCCTGCTCACGAACAT
                      ____________________________________________________________
consensus TACAGGTTGGAGAATCACCAGCCACATTTCCCAAGGCCCAGACTGCCTGCTCACGAACAT
 
. : . : . : . : . : . :
JMFF041E14+ CATCACTTGGTGAGCTAAGAAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
JMFF011O05+ CATCACTTGGTGAGCTAAGAAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
JMSF053O15+ CATCACTTGGTGAGCTAAGAAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
JMFS134C01+ AAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
                      ____________________________________________________________
consensus CATCACTTGGTGAGCTAAGAAGTTGTATAAACTTAGGGACAGCACCATGTTCAATGACAA
 
. : . : . : . : . : . :
JMFF041E14+ CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
JMFF029A01+ TGCCCAAGCAGCTTCAAATT
JMFF011O05+ CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
JMSF053O15+ CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
JMFS134C01+ CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
                      ____________________________________________________________
consensus CCCGTGTATGTTCTGATGTACCAGATGCTACATTTGTTAATGCCCAAGCAGCTTCAAATT
 
. : . : . : . : . : . :
JMFF041E14+ GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
JMFF029A01+ GCAATTGGGGTAAGTCATTTCTNTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
JMFF011O05+ GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
JMSF053O15+ GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
JMFS134C01+ GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
                      ____________________________________________________________
consensus GCAATTGGGGTAAGTCATTTCTTTCAAGAAACTGTACAAAGCGTGGGACAACTCCAGCTT
 
. : . : . : . : . : . :
JMFF041E14+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
JMFF029A01+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
JMFF011O05+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
JMSF053O15+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
JMFS134C01+ TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
                      ____________________________________________________________
consensus TAATCACTTCATCTATTGGAGGGCTGCGCTCAATGGATAACAGTTTTCTGAATTGTGTGG
 
. : . : . : . : . : . :
JMFF041E14+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
JMFF029A01+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
JMFF011O05+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
JMSF053O15+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
JMFS134C01+ TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
                      ____________________________________________________________
consensus TTGCTTCAATTTGTACAGCTGGATCCTCAGACCATACTCCTTGGACCATCAATGGAATGC
 
. : . : . : . : . : . :
JMFF041E14+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
JMFF029A01+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
JMFF011O05+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
JMSF012F04+ AGAAGCATCAAGAACATGCTGGGACT
JMSF053O15+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
JMFS134C01+ ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
                      ____________________________________________________________
consensus ATTCTAGCCGTTTGTCAGGAGCGGCGGGGGATTGAGAAGCATCAAGAACATGCTGGGACT
 
. : . : . : . : . : . :
JMFF041E14+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
JMFF029A01+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
JMFF011O05+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
JMSF012F04+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCNTGATCTCCA
JMSF053O15+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
JMFS134C01+ GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGATCTTCCTGATCTCCA
                      ____________________________________________________________
consensus GAAGAACCTCGCGGCGCTTCTTAAGAAGGTTATCCTCGCGCTTGCTCTTCCTGATCTCCA
 
. : . : . : . : . : . :
JMFF041E14+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMFF029A01+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMFF011O05+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMSF012F04+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMSF053O15+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMFS134C01+ CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
JMSF013B24+ TCGGCATCCACTCCGATCTTGTACGACT
                      ____________________________________________________________
consensus CCAGGTTGTCCTCCCTCCGCCGCCGCGCCTCGTCGGCATCCACTCCGATCTTGTACGACT
 
. : . : . : . : . : . :
JMFF041E14+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMFF029A01+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMFF011O05+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMSF012F04+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMSF053O15+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMFS134C01+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
JMSF013B24+ TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
                      ____________________________________________________________
consensus TCTTGCGTACCTCAGTTCGGGTACCGGGTCGCAATGACATTTTCGGGATTCGGGTTTGGA
 
. : . : . : . : . : . :
JMFF041E14+ TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACC
JMFF029A01+ TTCTCTG
JMFF011O05+ TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACC
JMSF012F04+ TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACC
JMSF053O15+ TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACC
JMFS134C01+ TTCTCTGCAATCAAAGTGTTCGACGAAATTCCCAACAGATACAATCAGAAAAAAAAATGA
JMSF013B24+ TTCTCTGCAATCAAAGTGTTCGACGAAATTCCCAACAGATACAATCAGAAAAAAAAATG-
                      ____________________________________________________________
consensus TTCTCTGGGTGGGGGATGCTAGCCGACCTGTTTGTTTACACCAATCAGAAAAAAAAATGA
 
. : . : . : . : . : . :
JMFS134C01+ AAAAAAATCGAATGGGTTTTGAATCCTAGAGATTGAAAGCAGGA
JMSF013B24+ AAAAAAATCGAATGGGTTTTGAATCCTAGAGATTGAAAGCAGGAGAGGTTATCGTGCCTC
                      ____________________________________________________________
consensus AAAAAAATCGAATGGGTTTTGAATCCTAGAGATTGAAAGCAGGAGAGGTTATCGTGCCTC