| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007I15 | Sequence | 498 | 005006 (7) | ref|XP_009781009.1| | 3e-72 | PREDICTED: vesicle-associated protein 2-1-like [Nicotiana sylvestris] | 789 | 005006 (7) | ref|XP_009781009.1| | 2e-116 | PREDICTED: vesicle-associated protein 2-1-like [Nicotiana sylvestris] |
| JMFF023M08 | Sequence | 515 | 005006 (7) | ref|XP_006359223.1| | 9e-64 | PREDICTED: vesicle-associated protein 2-1-like [Solanum tuberosum] | 798 | 005006 (7) | ref|XP_009781009.1| | 1e-112 | PREDICTED: vesicle-associated protein 2-1-like [Nicotiana sylvestris] |
| JMFN008J17 | Sequence | 610 | 005006 (7) | ref|XP_009781009.1| | 1e-90 | PREDICTED: vesicle-associated protein 2-1-like [Nicotiana sylvestris] | |||||
| JMSF011J05 | Sequence | 291 | 005006 (7) | 754 | 005006 (7) | ref|XP_009781009.1| | 2e-110 | PREDICTED: vesicle-associated protein 2-1-like [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF011J05- AGGAGA
rJMFF023M08- TCTAAGACATCAAAACCTTTGGACAAAAATATATCAAGGAGA
rJMFF007I15- AGGAGA
____________________________________________________________
consensus TCTAAGACATCAAAACCTTTGGACAAAAATATATCAAGGAGA
. : . : . : . : . : . :
rJMSF011J05- ATCCAAATTTACAACGAATGAACAGAATCCTATTTGTCACTTGATCAAAGTGAGAAAATT
rJMFF023M08- ATCCAAATTTACAACGAATGAACAGAATCCTATTTGTCACTTGATCAAAGTGAGAAAATT
rJMFF007I15- ATCCAAATTTACAACGAATGAACAGAATCCTATTTGTCACTTGATCAAAGTGAGAAAATT
____________________________________________________________
consensus ATCCAAATTTACAACGAATGAACAGAATCCTATTTGTCACTTGATCAAAGTGAGAAAATT
. : . : . : . : . : . :
rJMSF011J05- ACTGCTTAAAATGAAAGGAGGGGGGGAAGAACTGTATTTTGGGGAAGAAGGGAGTGAAGA
rJMFF023M08- ACTGCTTAAAATGAAAGGAGGGGGGGAAGAACTGTATTTTGGGGAAGAAGGGAGTGAAGA
rJMFF007I15- ACTGCTTAAAATGAAAGGAGGGGGGGAAGAACTGTATTTTGGGGAAGAAGGGAGTGAAGA
____________________________________________________________
consensus ACTGCTTAAAATGAAAGGAGGGGGGGAAGAACTGTATTTTGGGGAAGAAGGGAGTGAAGA
. : . : . : . : . : . :
rJMSF011J05- AGTTATTCTGCAGTAGGCGAAGACAACAGCTTGAACAGGATGCCAACCGTAAACCCGATA
rJMFF023M08- AGTTATTCTGCAGTAGGCGAAGACAACAGCTTGAACAGGATGCCAACCGTAAACCCGATA
rJMFF007I15- AGTTATTCTGCAGTAGGCGAAGACAACAGCTTGAACAGGATGCCAACCGTAAACCCGATA
____________________________________________________________
consensus AGTTATTCTGCAGTAGGCGAAGACAACAGCTTGAACAGGATGCCAACCGTAAACCCGATA
. : . : . : . : . : . :
rJMSF011J05- ACTCCAACGAGAAGCGCAAATTTTAGGGAGAAGCCTAGGTCGTTTTTCCTATTTCTTCGT
rJMFF023M08- ACTCCAACGAGAAGCGCAAATTTTAGGGAGAAGCCTAGGTCGTTTTTCCTATTTCTTCGT
rJMFF007I15- ACTCCAACGAGAAGCGCAAATTTTAGGGAGAAGCCTAGGTCGTTTTTCCTATTTCTTCGT
____________________________________________________________
consensus ACTCCAACGAGAAGCGCAAATTTTAGGGAGAAGCCTAGGTCGTTTTTCCTATTTCTTCGT
. : . : . : . : . : . :
rJMSF011J05- CTCTTCAGCATATCCAGTTCTTGTTGCAATTGTTGTGTTTGCCTCACAGCTGCATCTCTT
rJMFF023M08- CTCTTCAGCATATCCAGTTCTTGTTGCAATTGTTGTGTTTGCCTCACAGCTGCATCTCTT
rJMFF007I15- CTCTTCAGCATATCCAGTTCTTGTTGCAATTGTTGTGTTTGCCTCACAGCTGCATCTCTT
JMFN008J17+ CAATTGTTGTGTTTGCCTCACAGCTGCATCTCTT
____________________________________________________________
consensus CTCTTCAGCATATCCAGTTCTTGTTGCAATTGTTGTGTTTGCCTCACAGCTGCATCTCTT
. : . : . : . : . : . :
rJMSF011J05- TCCTCTCTAGTGCGCTGCACCATCTGATTAGAATTTGCATCAGAGCCTTGTTTGGATCCG
rJMFF023M08- TCCTCTCTAGTGCGCTGCACCATCTGATTAGAATTTGCATCAGAGCCTTGTTTGGATCCG
rJMFF007I15- TCCTCTCTAGTGCGCTGCACCATCTGATTAGAATTTGCATCAGAGCCTTGTTTGGATCCG
JMFN008J17+ TCCTCTCTAGTGCGCTGCACCATCTGATTAGAATTTGCATCAGAGCCTTGTTTGGATCCG
____________________________________________________________
consensus TCCTCTCTAGTGCGCTGCACCATCTGATTAGAATTTGCATCAGAGCCTTGTTTGGATCCG
. : . : . : . : . : . :
rJMSF011J05- TCTTCTGAATTTCCTGTAGTAGAATTAGGAGTAACGTACAGAACCTTAAGCTTGCACTCC
rJMFF023M08- TCTTCTGAATTTCCTGTAGTAGAATTAGGAGTAACGTACAGAACCTTAAGCTTGCACTCC
rJMFF007I15- TCTTCTGAATTTCCTGTAGTAGAATTAGGAGTAACGTACAGAACCTTAAGCTTGCACTCC
JMFF007I15+ TTCCTGTAGTAGAATTAGGAGTAACGTACAGAACCTTAAGCTTGCACTCC
JMFN008J17+ TCTTCTGAATTTCCTGTAGTAGAATTAGGAGTAACGTACAGAACCTTAAGCTTGCACTCC
____________________________________________________________
consensus TCTTCTGAATTTCCTGTAGTAGAATTAGGAGTAACGTACAGAACCTTAAGCTTGCACTCC
. : . : . : . : . : . :
rJMSF011J05- TCTACTACTGTTTTCCCATTGTCCTTATTAAACGTATCTGGTGGAAGGTCATCAGAATAA
rJMFF023M08- TCTACTACTGTTTTCCCATTGTCCTTATTAAACGTATCTGGTGGAAGGTCATCAGAATAA
rJMFF007I15- TCTACTACTGTTTTCCCATTGTCCTTATTAAACGTATCTGGTGGAAGGTCATCAGAATAA
JMFF007I15+ TCTACTACTGTTTTCCCATTGTCCTTATTAAACGTATCTGGTGGAAGGTCATCAGAATAA
JMFN008J17+ TCTACTACTGTTTTCCCATTGTCCTTATTAAACGTATCTGGTGGAAGGTCATCAGAATAA
JMFF023M08+ TCTACTACTGTTTTCCCATTGTCCTTATTAAACGTATCTGGTGGAAGGTCATCAGAATAA
____________________________________________________________
consensus TCTACTACTGTTTTCCCATTGTCCTTATTAAACGTATCTGGTGGAAGGTCATCAGAATAA
. : . : . : . : . : . :
rJMSF011J05- CTACCGACAATGGTGCTCTGTAGAAGAAATTTGTCCTTGCATTGCATATCGGCAGGAAAC
rJMFF023M08- CTACCGACAATGGTGCTCTGTAGAAGAAATTTGTCCTTGCATTGCATATCGGCAGGAAAC
rJMFF007I15- CTACCGACAATGGTGCTCTGTAGAAGAAATTTGTCCTTGCATTGCATATCGGCAGGAAAC
JMFF007I15+ CTACCGACAATGGTGCTCTGTAGAAGAAATTTGTCCTTGCATTGCATATCGGCAGGAAAC
JMFN008J17+ CTACCGACAATGGTGCTCTGTAGAAGAAATTTGTCCTTGCATTGCATATCGGCAGGAAAC
JMFF023M08+ CTACCGACAATGGTGCTCTGTAGAAGAAATTTGTCCTTGCATTGCATATCGGCAGGAAAC
____________________________________________________________
consensus CTACCGACAATGGTGCTCTGTAGAAGAAATTTGTCCTTGCATTGCATATCGGCAGGAAAC
. : . : . : . : . : . :
rJMSF011J05- TCTCGTTGAGCTTGAAGGGTAACTCTGATGTAACACGAATCCCATGGCTGTATAACACCG
rJMFF023M08- TCTCGTTGAGCTTGAAGGGTAACTCTGATGTAACACGAATCCCATGGCTGTATAACACCG
rJMFF007I15- TCTCGTTGAGCTTGAAGGGTAACTCTGATGTAACACGAATCCCATGGCTGTATAACACCG
JMFF007I15+ TCTCGTTGAGCTTGAAGGGTAACTCTGATGTAACACGAATCCCATGGCTGTATAACACCG
JMFN008J17+ TCTCGTTGAGCTTGAAGGGTAACTCTGATGTAACACGAATCCCATGGCTGTATAACACCG
JMFF023M08+ TCTCGTTGAGCTTGAAGGGTAACTCTGATGTAACACGAATCCCATGGCTGTATAACACCG
____________________________________________________________
consensus TCTCGTTGAGCTTGAAGGGTAACTCTGATGTAACACGAATCCCATGGCTGTATAACACCG
. : . : . : . : . : . :
rJMSF011J05- GTGTTTGGCCGTACAAAATACTTCTTTGGAGAAGTAGTCTTTACCTTGAAAGCAACATTA
rJMFF023M08- GTGTTTGGCCGTACAAAATACTTCTTTGGAGAAGTAGTCTTTACCTTGAAAGCAACATTA
rJMFF007I15- GTGTTTGGCCGTACAAAATACTTCTTTGGAGAAGTAGTCTTTACCTTGAAAGCAACATTA
JMFF007I15+ GTGTTTGGCCGTACAAAATACTTCTTTGGAGAAGTAGTCTTTACCTTGAAAGCAACATTA
JMFN008J17+ GTGTTTGGCCGTACAAAATACTTCTTTGGAGAAGTAGTCTTTACCTTGAAAGCAACATTA
JMFF023M08+ GTGTTTGGCCGTACAAAATACTTCTTTGGAGAAGTAGTCTTTACCTTGAAAGCAACATTA
____________________________________________________________
consensus GTGTTTGGCCGTACAAAATACTTCTTTGGAGAAGTAGTCTTTACCTTGAAAGCAACATTA
. : . : . : . : . : . :
rJMSF011J05- TGCTCGGTAGTATTCGAAACTTTAAGATCACAGAAGCTTTGTTTATCGAGCTCAAATTGG
rJMFF023M08- TGCTCGGTAGTATTCGAAACTTTAAGATCACAGAAGCTTTGTTTATCGAGCTCAAATTGG
rJMFF007I15- TGCTCGGTAGTATTCGAAACTTTAAGATCACAGAAGCTTTGTTTATCGAGCTCAAATTGG
JMFF007I15+ TGCTCGGTAGTATTCGAAACTTTAAGATCACAGAAGCTTTGTTTATCGAGCTCAAATTGG
JMFN008J17+ TGCTCGGTAGTATTCGAAACTTTAAGATCACAGAAGCTTTGTTTATCGAGCTCAAATTGG
JMFF023M08+ TGCTCGGTAGTATTCGAAACTTTAAGATCACAGAAGCTTTGTTTATCGAGCTCAAATTGG
____________________________________________________________
consensus TGCTCGGTAGTATTCGAAACTTTAAGATCACAGAAGCTTTGTTTATCGAGCTCAAATTGG
. : . : . : . : . : . :
rJMSF011J05- AACTTGAGCTCATCCGGACTAACAGAAA
rJMFF023M08- AACTTGAGCTCATCCGGACTAACAGAAATCAACTGG
rJMFF007I15- AACTTGAGCTCATCCGGACTAACAGAAATCAACTGGTTGGAAGCACCAGTCATCGTACAC
JMFF007I15+ AACTTGAGCTCATCCGGACTAACAGAAATCAACTGGTTGGAAGCACCAGTCATCGTACAC
JMFN008J17+ AACTTGAGCTCATCCGGACTAACAGAAATCAACTGGTTGGAAGCACCAGTCATCGTACAC
JMFF023M08+ AACTTGAGCTCATCCGGACTAACAGAAATCAACTGGTTGGAAGCACCAGTCATCGTACAC
JMSF011J05+ TCATCCGGACTAACAGAAATCAACTGGTTGGAAGCACCAGTCATCGTACAC
____________________________________________________________
consensus AACTTGAGCTCATCCGGACTAACAGAAATCAACTGGTTGGAAGCACCAGTCATCGTACAC
. : . : . : . : . : . :
rJMFF007I15- AGC
JMFF007I15+ AGCCACGATGAAACGGATCAACGTCGGAATCAGCCGGAAGCAAACATGGAACAGCAGAGG
JMFN008J17+ AGCCCCGATGAAACGGATCAACGTCGGAATCAGCCGGAAGCAAACATGGAACAGCAGAGG
JMFF023M08+ AGCCCCGATGAAACGGATCAACGTCGGAATCAGCCGGAAGCAAACATGGAACAGCAGAGG
JMSF011J05+ AGCCCCGATGAAACGGATCAACGTCGGAATCAGCCGGAAGCAAACATGGAACAGCAGAGG
____________________________________________________________
consensus AGCCCCGATGAAACGGATCAACGTCGGAATCAGCCGGAAGCAAACATGGAACAGCAGAGG
. : . : . : . : . : . :
JMFF007I15+ CGATTTCGGAGGTTAACGGCTCACCTT
JMFN008J17+ CGATTTCGGAGGTTAACGGCTCACCTT
JMFF023M08+ CGATTTCGGAGGTTAACGGCTCACCTTCAACGATCAATTTTCTGGTCAGAAACAAATTGA
JMSF011J05+ CGATTTCGGAGGTTAACGGCTCACCTTCAACGATCAATTTTCTGGTCAGAAACAAATTGA
____________________________________________________________
consensus CGATTTCGGAGGTTAACGGCTCACCTTCAACGATCAATTTTCTGGTCAGAAACAAATTGA
. : . : . : . : . : . :
JMFF023M08+ GAGAGAAAGAGAGAGATGAATGATTTAGATGGAAG
JMSF011J05+ GAGAGAAAGAGAGAGATGAATGATTTAGATGGAAGGGGGGGAGTGGGGGAGTGGGGAAGG
____________________________________________________________
consensus GAGAGAAAGAGAGAGATGAATGATTTAGATGGAAGGGGGGGAGTGGGGGAGTGGGGAAGG
. : . : . : . : . : . :
JMSF011J05+ GTGGCTTTCAATGATAAGGGATGGCGGGTCGTGGTGGTGGGAATGATGCCATGACACATC
____________________________________________________________
consensus GTGGCTTTCAATGATAAGGGATGGCGGGTCGTGGTGGTGGGAATGATGCCATGACACATC