Contig 005004:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011G04Sequence366005004 (3)ref|XP_009799495.1|8e-30PREDICTED: uncharacterized protein LOC104245573 isoform X1 [Nicotiana sylvestri759010371 (3)ref|XP_009611123.1|2e-109PREDICTED: uncharacterized protein LOC104104686 isoform X3 [Nicotiana tomentosi
JMSF030H19Sequence653005004 (3)ref|XP_009611121.1|3e-119PREDICTED: uncharacterized protein LOC104104686 isoform X1 [Nicotiana tomentosi624010371 (3)ref|XP_009611123.1|2e-90PREDICTED: uncharacterized protein LOC104104686 isoform X3 [Nicotiana tomentosi
JMSF034F08Sequence646005004 (3)ref|XP_009611121.1|5e-118PREDICTED: uncharacterized protein LOC104104686 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF034F08+ CATGAGAACGTACAATAAAAGCTGCTTGATTTTAGTTAACCTG
JMSF030H19+ CCCATGAGAACGTACAATAAAAGCTGCTTGATTTTAGTTAACCTG
                      ____________________________________________________________
consensus CCCATGAGAACGTACAATAAAAGCTGCTTGATTTTAGTTAACCTG
 
. : . : . : . : . : . :
JMSF034F08+ TCGGGATCTTCAATTGCCAATCCGGTTTCTTCATCAGTAATGTAAACAACCGAGGCCATT
JMSF030H19+ TCGGGATCTTCAATTGCCAATCCGGTTTCTTCATCAGTAATGTAAACAACCGAGGCCATT
                      ____________________________________________________________
consensus TCGGGATCTTCAATTGCCAATCCGGTTTCTTCATCAGTAATGTAAACAACCGAGGCCATT
 
. : . : . : . : . : . :
JMSF034F08+ CTTGAATTGTGAGTCCATACTTCTGCAGCTACAACGTAGCATTTGTGGTCGGTGAGAACC
JMSF030H19+ CTTGAATTGTGAGTCCATACTTCTGCAGCTACAACGTTGCATTTGTGGTCGGTGAGAACC
                      ____________________________________________________________
consensus CTTGAATTGTGAGTCCATACTTCTGCAGCTACAACGTTGCATTTGTGGTCGGTGAGAACC
 
. : . : . : . : . : . :
JMSF034F08+ GCAAAGATCTCCGAAAGCAGGCCTTGCCGGTCTCTTCCCGACAATTCAATCGTGGTGTGC
JMSF030H19+ GCAAAGATCTCCGAAAGCAGGCCTTGCCGGTCTCTTCCCGACAATTCAATCGTGGTGTGC
                      ____________________________________________________________
consensus GCAAAGATCTCCGAAAGCAGGCCTTGCCGGTCTCTTCCCGACAATTCAATCGTGGTGTGC
 
. : . : . : . : . : . :
JMSF034F08+ TTAACCGCGGGTTGAACACCGACCGATCTTGTCAATGACCGAAAGCTATAACTCCTTGGT
JMSF030H19+ TTAACCGCGGGTTGAACACCGACCGATCTTGTCAATGACCGAAAGCTATAACTCCTTGGT
                      ____________________________________________________________
consensus TTAACCGCGGGTTGAACACCGACCGATCTTGTCAATGACCGAAAGCTATAACTCCTTGGT
 
. : . : . : . : . : . :
JMSF034F08+ CCCAGCGACTGCTGAATGCGCTCTGCAACGTTATCTTCGGTCAGCTTTTTCCCATACTGA
JMSF030H19+ CCCAGCGACTGCTGAATGCGCTCTGCAACGTTATCTTCGGTCAGCTTTTTCCCATACTGA
                      ____________________________________________________________
consensus CCCAGCGACTGCTGAATGCGCTCTGCAACGTTATCTTCGGTCAGCTTTTTCCCATACTGA
 
. : . : . : . : . : . :
JMSF034F08+ TCAGTAACATGAAACACATCCATAAACCATTCTCCATCCGAAGAAATGTAAGCCCGACGA
JMSF030H19+ TCAGTAACATGAAACACATCCATAAACCATTCTCCATCCGAAGAAATGTAAGCCCGACGA
JMSF011G04+ CGACGA
                      ____________________________________________________________
consensus TCAGTAACATGAAACACATCCATAAACCATTCTCCATCCGAAGAAATGTAAGCCCGACGA
 
. : . : . : . : . : . :
JMSF034F08+ ACTATGAGGTTCAAATCAGTAAGAACCTGAGCCACCTCCAACAAGCTGCCGCGCTTATTA
JMSF030H19+ ACTATGAGGTTCAAATCAGTAAGAACCTGAGCCACCTCCAACAAGCTGCCGCGCTTATTA
JMSF011G04+ ACTATGAGGTTCAAATCAGTAAGAACCTGAGCCACNTCCAACAAGCTGCCGCGCTTATTA
                      ____________________________________________________________
consensus ACTATGAGGTTCAAATCAGTAAGAACCTGAGCCACCTCCAACAAGCTGCCGCGCTTATTA
 
. : . : . : . : . : . :
JMSF034F08+ GCACTATCAACCTTGATCAATGTTGTTTTCTTGTCTGATATGTTATCAACAGTGACCCTT
JMSF030H19+ GCACTATCAACCTTGATCAATGTTGTTTTCTTGTCTGATATGTTATCAACAGTGACCCTT
JMSF011G04+ GCACTATCAACCTTGATCAATGTTGTTTTCTTGTCTGATATGTTATCAACAGTGACCCTT
                      ____________________________________________________________
consensus GCACTATCAACCTTGATCAATGTTGTTTTCTTGTCTGATATGTTATCAACAGTGACCCTT
 
. : . : . : . : . : . :
JMSF034F08+ GGCGGGTTCATCCGGAGCACAAGCTTCTCAAATTCATCATCAACAGTGACAGAAGAGGAC
JMSF030H19+ GGCGGGTTCATCCGGAGCACAAGCTTCTCAAATTCATCATCAACAGTGACAGAAGAGGAC
JMSF011G04+ GGCGGGTTCATCCGGAGCACAAGCTTCTCAAATTCATCATCAACAGTGACAGAAGAGGAC
                      ____________________________________________________________
consensus GGCGGGTTCATCCGGAGCACAAGCTTCTCAAATTCATCATCAACAGTGACAGAAGAGGAC
 
. : . : . : . : . : . :
JMSF034F08+ CAACAATCCATGGCTGCGCTGATGAAATCTCTGCTCCCTTTCCCCTCTAAAGAGTGTTGC
JMSF030H19+ CAACAATCCATGGCTGCGCTGATGAAATCTCTGCTCCCTTTCCCCTCTAAAGAGTGTTGC
JMSF011G04+ CAACAATCCATGGCTGCGCTGATGAAATCTCTGCTCCCTTTCCCCTCTAAAGAGTGTTGC
                      ____________________________________________________________
consensus CAACAATCCATGGCTGCGCTGATGAAATCTCTGCTCCCTTTCCCCTCTAAAGAGTGTTGC
 
. : . : . : . : . : . :
JMSF034F08+ TT
JMSF030H19+ TT
JMSF011G04+ TTAAGGTGTGTATGGTAAGGAAAGGGGTCCGTTTTGTTGGGTGTGTGTTGGTTAAAGCGC
                      ____________________________________________________________
consensus TTAAGGTGTGTATGGTAAGGAAAGGGGTCCGTTTTGTTGGGTGTGTGTTGGTTAAAGCGC
 
. : . : . : . : . : . :
JMSF011G04+ GGAGAGGGAGGGAGGGAGGGAGAGAGGGGGTGAAAGAAAGGGTGTGTGTGGGGGACAGCC
                      ____________________________________________________________
consensus GGAGAGGGAGGGAGGGAGGGAGAGAGGGGGTGAAAGAAAGGGTGTGTGTGGGGGACAGCC