Contig 004981:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048C04Sequence437004981 (6)222002819 (19)
JMSF006J11Sequence361004981 (6)555011116 (2)gb|ADG28675.2|2e-57gibberellin 20-oxidase 3 [Ipomoea nil]
JMSF008J11Sequence327004981 (6)778005752 (3)ref|XP_008243378.1|132PREDICTED: uncharacterized protein LOC103341609 [Prunus mume]
JMSF034G14Sequence637004981 (6)emb|CDO98350.1|3e-25unnamed protein product [Coffea canephora]726005752 (3)ref|XP_008243378.1|132PREDICTED: uncharacterized protein LOC103341609 [Prunus mume]
JMSF036H07Sequence700004981 (6)751005752 (3)ref|XP_008243378.1|132PREDICTED: uncharacterized protein LOC103341609 [Prunus mume]
JMSF037J05Sequence638004981 (6)emb|CDO98350.1|6e-26unnamed protein product [Coffea canephora]726018286ref|XP_008243378.1|263PREDICTED: uncharacterized protein LOC103341609 [Prunus mume]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF036H07+ AACTGTTTTTAAATGAAAAACAAAATCATATATCATTCATCTATNGGCTATATAT
                      ____________________________________________________________
consensus AACTGTTTTTAAATGAAAAACAAAATCATATATCATTCATCTATNGGCTATATAT
 
. : . : . : . : . : . :
JMSF036H07+ TACTATAACCATATTCTCACCATTATCTACTAACATATTTATTTATTTCCACATTCATTA
                      ____________________________________________________________
consensus TACTATAACCATATTCTCACCATTATCTACTAACATATTTATTTATTTCCACATTCATTA
 
. : . : . : . : . : . :
JMSF036H07+ TCATATGTTTTTAATTTTTATTGAACTCAATAGATTTTTTTAATTACGTCACGTTTTAAG
                      ____________________________________________________________
consensus TCATATGTTTTTAATTTTTATTGAACTCAATAGATTTTTTTAATTACGTCACGTTTTAAG
 
. : . : . : . : . : . :
JMSF036H07+ ATTTGATCGATCACATACCGTATACAACTGTGATAACATTCAGCAAGATTACACTCCTCA
JMSF037J05+ CGTATACAACTGTGATAACATTCAGCAAGATTACACTCCTCA
JMSF034G14+ CGTATACAACTGTGATAACATTCAGCAAGATTACACTCCTCA
                      ____________________________________________________________
consensus ATTTGATCGATCACATACCGTATACAACTGTGATAACATTCAGCAAGATTACACTCCTCA
 
. : . : . : . : . : . :
JMSF036H07+ ACTTGTTTGATCTACACACAATTTTCCTCCAAAATGCTTTCTTTCTACCCAAAGATTTCT
JMSF037J05+ ACTTGTTTGATCTACACNCAATTTTCCTCCAAAATGCTTTCTTTCTACCCAAAGATTTCT
JMFF048C04+ TTCTTTCTACCCAAAGATTTCT
JMSF034G14+ ACTTGTTTGATCTACACACAATTTTCCTCCAAAATGCTTTCTTTCTACCCAAAGATTTCT
                      ____________________________________________________________
consensus ACTTGTTTGATCTACACACAATTTTCCTCCAAAATGCTTTCTTTCTACCCAAAGATTTCT
 
. : . : . : . : . : . :
JMSF036H07+ TGGTCGCAACCCACACAGGATCTCTCCCCTTCGACCTCTCCCCTTCTTCACTGCAAAAAA
JMSF037J05+ TGGTCGCAACCCACACAGGATCTCTCCCCTTCGACCTCTCCCCTTCTTCACTGCAAAAAA
JMFF048C04+ TGGTCGCAACCCACACAGGATCTCTCCCCTTCGACCTCTCCCCTTCTTCACTGCAAAAAA
JMSF034G14+ TGGTCGCAACCCACACAGGATCTCTCCCCTTCGACCTCTCCCCTTCTTCACTGCAAAAAA
JMSF006J11+ CACTGCAAAAAA
                      ____________________________________________________________
consensus TGGTCGCAACCCACACAGGATCTCTCCCCTTCGACCTCTCCCCTTCTTCACTGCAAAAAA
 
. : . : . : . : . : . :
JMSF036H07+ CTGGCCAATAA-TTCCCATGACAATTTACAGCTTTTCTCCAGGATCTCTCTTTCAATCCC
JMSF037J05+ CTGGCCAATAA-TTCCCATGACAATTTACAGCTTTTCTCCAGGATCTCTCTTTCAATCCC
JMFF048C04+ CTGGCCAATAA-TTCCCATGACAATTTACAGCTTTTCTCCAGGATCTCTCTTTCAATCCC
JMSF034G14+ CTGGCCAATAA-TTCCCATGACAATTTACAGCTTTTCTCCAGGATCTCTCTTTCAATCCC
JMSF006J11+ CTGGCCAATAATTTCCCATGACAATTTACAGCTTTTCTCCAGGATCTCTCTTTCAATCCC
JMSF008J11+ TTTCTCCAGGATCTCTCTTTCAATCCC
                      ____________________________________________________________
consensus CTGGCCAATAA-TTCCCATGACAATTTACAGCTTTTCTCCAGGATCTCTCTTTCAATCCC
 
. : . : . : . : . : . :
JMSF036H07+ TCACCAAAAATAGCTGAACAGCAATTCACGGAAGAAGAAGAAGAAGAAGAAAAAGAATGA
JMSF037J05+ TCACCAAAAATAGCTGAACAGCAATTCACGGAAGAAGAAGAAGAAGAAGAAAAAGAATGA
JMFF048C04+ TCACCAAAAATAGCTGAACAGCAATTCACGGAAGAAGAAGAAGAAGAAGAAAAAGAATGA
JMSF034G14+ TCACCAAAAATAGCTGAACAGCAATTCACGGAAGAAGAAGAAGAAGAAGAAAAAGAATGA
JMSF006J11+ TCACCAAAAATAGCTGAACAGCAATTCACGGAAGAAGAAGAAGAAGAAGAAAAAGAATGA
JMSF008J11+ TCACCAAAAATAGCTGAACAGCAATTCACGGAAGAAGAAGAAGAAGAAGAAAAAGAATGA
                      ____________________________________________________________
consensus TCACCAAAAATAGCTGAACAGCAATTCACGGAAGAAGAAGAAGAAGAAGAAAAAGAATGA
 
. : . : . : . : . : . :
JMSF036H07+ TCAGACAAGGAAACGACCGTGAGATGACTCTTTCGGAGTCCTCTAGGAATCAAGAAGCAA
JMSF037J05+ TCAGACAAGGAAACGACCGTGAGATGACTCTTTCGGAGTCCTCTAGGAATCAAGAAGCAA
JMFF048C04+ TCAGACAAGGAAACGACCGTGAGATGACTCTTTCGGAGTCCTCTAGGAATCAAGAATCAA
JMSF034G14+ TCAGACAAGGAAACGACCGTGAGATGACTCTTTCGGAGTCCTCTAGGAATCAAGAAGCAA
JMSF006J11+ TCAGACAAGGAAACGACCGTGAGATGACTCTTTCGGAGTCCTCTAGGAATCAAGAAGCAA
JMSF008J11+ TCAGACAAGGAAACGACCGTGAGATGACTCTTTCGGAGTCCTCTAGGAATCAAGAAGCAA
                      ____________________________________________________________
consensus TCAGACAAGGAAACGACCGTGAGATGACTCTTTCGGAGTCCTCTAGGAATCAAGAAGCAA
 
. : . : . : . : . : . :
JMSF036H07+ GATACTGTTGCCACTGAAGCAGAATCTTTAGGAATCTTGCAAGTGGATAGATAGGACATG
JMSF037J05+ GATACTGTTGCCACTGAAGCAGAATCTTTAGGAATCTTGCAAGTGGATAGATAGGACATG
JMFF048C04+ GATACTGTTGCCACTGAAGCAGAATCTTTAGGAATCTTGCAAGTGGATAGATAGGACATG
JMSF034G14+ GATACTGTTGCCACTGAAGCAGAATCTTTAGGAATCTTGCAAGTGGATAGATAGGACATG
JMSF006J11+ GATACTGTTGCCACTGAAGCAGAATATTTAGGAATCTTGCAAGTGGATAGATAGGACATG
JMSF008J11+ GATACTGTTGCCACTGAAGCAGAATCTTTAGGAATCTTGCAAGTGGATAGATAGGACATG
                      ____________________________________________________________
consensus GATACTGTTGCCACTGAAGCAGAATCTTTAGGAATCTTGCAAGTGGATAGATAGGACATG
 
. : . : . : . : . : . :
JMSF036H07+ TTTAATGCTTAAACTATGAATCACCATGCCCTCTCATTCACCTTTGTAGATGCCATAAAC
JMSF037J05+ TTTAATGCTTAAACTATGAATCACCATGCCCTCTCATTCACCTTNGTAGATGCCATAAAC
JMFF048C04+ TTTAATGCTTAAACTATGAATCACCATGCCCTCTCATTCACCTTTGTAGATGCCATAAAC
JMSF034G14+ TTTAATGCTTAAACTATGAATCACCATGCCCTCTCATTCACCTTTGTAGATGCCATAAAC
JMSF006J11+ TTTAATGCTTAAACTATGAATCACCATGCCCTCTCATTCACCTTTGTAGATGCCATAAAC
JMSF008J11+ TTTAATGCTTAAACTATGAATCACCATGCCCTCTCATTCACCTTTGTAGATGCCATAAAC
                      ____________________________________________________________
consensus TTTAATGCTTAAACTATGAATCACCATGCCCTCTCATTCACCTTTGTAGATGCCATAAAC
 
. : . : . : . : . : . :
JMSF036H07+ AAAGAATTTTAAGATCTGATAGCATAGATAAATTAAATGGAGTC
JMSF037J05+ AAAGAATTTTAAGATCTGATAGCATAGATAAATTAAATGGAGTCT
JMFF048C04+ AAAGAATTTTAAGATCTGATAGCATAGATAAATTAAATGGAGTCTAGC
JMSF034G14+ AAAGAATTTTAAGATCTGATAGCATAGATAAATTAAATGGAGTCTAGC
JMSF006J11+ AAAGAATTTTAAGATCTGATAGCATAGATAAATTAAATGGAGTCTAGC
JMSF008J11+ AAAGAATTTTAAGATCTGATAGCATAGATAAATTAAATGGAGTCTAGCATTCTTGTGCTC
                      ____________________________________________________________
consensus AAAGAATTTTAAGATCTGATAGCATAGATAAATTAAATGGAGTCTAGCATTCTTGTGCTC