| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022G21 | Sequence | 523 | 004956 (6) | ref|XP_009782152.1| | 1e-57 | PREDICTED: protein decapping 5 isoform X2 [Nicotiana sylvestris] | 736 | 012521 (3) | ref|XP_010066758.1| | 2e-36 | PREDICTED: protein decapping 5 isoform X2 [Eucalyptus grandis] gb|KCW64786.1| hy |
| JMFN004E19 | Sequence | 627 | 004956 (6) | ref|XP_003518695.1| | 9e-66 | PREDICTED: protein decapping 5-like [Glycine max] gb|KHN05844.1| Protein LSM14 l | |||||
| JMFS098B06 | Sequence | 627 | 004956 (6) | ref|XP_002281060.1| | 2e-74 | PREDICTED: protein decapping 5 [Vitis vinifera] ref|XP_010648039.1| PREDICTED: p | |||||
| JMSF006E23 | Sequence | 154 | 004956 (6) | ||||||||
| JMSF007G14 | Sequence | 414 | 004956 (6) | ref|XP_007222759.1| | 3e-41 | hypothetical protein PRUPE_ppa006535mg [Prunus persica] gb|EMJ23958.1| hypotheti | 742 | 012521 (3) | ref|XP_010066757.1| | 1e-16 | PREDICTED: protein decapping 5 isoform X1 [Eucalyptus grandis] gb|KCW64788.1| hy |
| JMSF026E18 | Sequence | 670 | 004956 (6) | ref|XP_002281060.1| | 5e-80 | PREDICTED: protein decapping 5 [Vitis vinifera] ref|XP_010648039.1| PREDICTED: p | 769 | 012521 (3) | emb|CDP00559.1| | 1e-40 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF026E18+ GGTAGTCCATTTGGG
____________________________________________________________
consensus GGTAGTCCATTTGGG
. : . : . : . : . : . :
JMFS098B06+ CAATACATTGGCATAGCAAGTCCACTACCACTTGCATTTTGG
JMSF026E18+ GTACCATAAAACCCCGGCCAATACATTGGCATAGCAAGTCCACTACCACTTGCATTTTGG
____________________________________________________________
consensus GTACCATAAAACCCCGGCCAATACATTGGCATAGCAAGTCCACTACCACTTGCATTTTGG
. : . : . : . : . : . :
JMFS098B06+ GGTGGATGTGATGGCCCCCAAGAGCCTAAATTCCCTCCAGGTTGATACAAAGGTAGAGCA
JMSF026E18+ GGTGGATGTGATGGCCCCCAAGAGCCTAAATTCCCTCCAGGTTGATACAAAGGTAGAGCA
JMFN004E19+ GATGGCCCCCAAGAGCCTANATTCCCTCCAGGTTGATACAAAGGTAGAGCA
____________________________________________________________
consensus GGTGGATGTGATGGCCCCCAAGAGCCTAAATTCCCTCCAGGTTGATACAAAGGTAGAGCA
. : . : . : . : . : . :
JMFS098B06+ CCTTGAGATGCTGGTCCAGGATGTCCCAGTTGTGATGAATGAGAATTAGGATCCACCACC
JMSF026E18+ CCTTGAGATGCTGGTCCAGGATGTCCCAGTTGTGATGAATGAGAATTAGGATCCACCACC
JMFN004E19+ CCTTGAGATGCTGGTCCAGGATGTCCCAGTTGTGATGAATGAGAATTAGGATCCACCACC
____________________________________________________________
consensus CCTTGAGATGCTGGTCCAGGATGTCCCAGTTGTGATGAATGAGAATTAGGATCCACCACC
. : . : . : . : . : . :
JMFS098B06+ GGAGCACTGGAAACTGGAAGCAAGCTTGAAGATGTGGTAGGTGGACGAGGATAATGAGAC
JMSF026E18+ GGAGCACTGGAAACTGGAAGCAAGCTTGAAGATGTGGTAGGTGGACGAGGATAATGAGAC
JMFN004E19+ GGAGCACTGGAAACTGGAAGCAAGCTTGAAGATGTGGTAGGTGGACGAGGATAATGAGAC
JMFF022G21+ GAAGCAAGCTTGAAGATGTGGTAGGTGGACGAGGATAATGAGAC
____________________________________________________________
consensus GGAGCACTGGAAACTGGAAGCAAGCTTGAAGATGTGGTAGGTGGACGAGGATAATGAGAC
. : . : . : . : . : . :
JMFS098B06+ TGAATAATAGCTGGATCATTGTTTATTTGCGGTGTACTCTGAACAGGCGGAGAAGCCTTC
JMSF026E18+ TGAATAATAGCTGGATCATTGTTTATTTGCGGTGTACTCTGAACAGGCGGAGAAGCCTTC
JMFN004E19+ TGAATAATAGCTGGATCATTGTTTATTTGCGGTGTACTCTGAACAGGCGGAGAAGCCTTC
JMSF007G14+ CAGGCGGAGAAGCCTTC
JMFF022G21+ TGAATAATAGCTGGATCATTGTTTATTTGCGGTGTACTCTGAACAGGCGGAGAAGCCTTC
____________________________________________________________
consensus TGAATAATAGCTGGATCATTGTTTATTTGCGGTGTACTCTGAACAGGCGGAGAAGCCTTC
. : . : . : . : . : . :
JMFS098B06+ ACTTGTAAATCCTTGATATCACTTCCCCGAAATAGTATATATTCATAAACTTTGTCACTT
JMSF026E18+ ACTCGTAAATCCTTGATATCACTTCCCCGAAATAGTATATATTCATAAACTTTGTCACTT
JMFN004E19+ ACTTGTAAATCCTTGATATCACTTCCCCGAAATAGTATATATTCATAAACTTTGTCACTT
JMSF007G14+ ACTTGTAAATCCTTGATATCACTTCCCCGAAATAGTATATATTCATAAACTTTGTCACTT
JMFF022G21+ ACTTGTAAATCCTTGATATCACTTCCCCGAAATAGTATATATTCATAAACTTTGTCACTT
____________________________________________________________
consensus ACTTGTAAATCCTTGATATCACTTCCCCGAAATAGTATATATTCATAAACTTTGTCACTT
. : . : . : . : . : . :
JMFS098B06+ GCAAGAACTTGAGGACCATCTTTTTTCCTCCCTTCTGTTCCAAATGATCTAACGTTGCGT
JMSF026E18+ GCAAGAACTTGAGGACCATCTTTTTTCCTCCCTTCTGTTCCAAATGATCTAACGTTGCGT
JMFN004E19+ GCAAGAACTTGAGGACCATCTTTTTTCCTCCCTTCTGTTCCAAATGATCTAACGTTGCGT
JMSF007G14+ GCAAGAACTTGAGGACCATCTTTTTTCCTCCCTTCTGTTCCAAATGATCTAACGTTGCGT
JMFF022G21+ GCAAGAACTTGAGGACCATCTTTTTTCCTCCCTTCTGTTCCAAATGATCTAACGTTGCGT
____________________________________________________________
consensus GCAAGAACTTGAGGACCATCTTTTTTCCTCCCTTCTGTTCCAAATGATCTAACGTTGCGT
. : . : . : . : . : . :
JMFS098B06+ AGGCCGATACTGGACTCATCGGTGTTGATGTTGTACAGAACACCTTCGTATCTGATCTCG
JMSF026E18+ AGGCCGATACTGGACTCATCGGTGTTGATGTTGTACAGAACACCTTCGTATCTGATCTCG
JMFN004E19+ AGGCCGATACTGGACTCATCGGTGTTGATGTTGTACAGAACACCTTCGTATCTGATCTCG
JMSF007G14+ AGGCCGATACTGGACTCATCGGTGTTGATGTTGTACAGAACACCTTCGTATCTGATCTCG
JMFF022G21+ AGGCCGATACTGGACTCATCGGTGTTGATGTTGTACAGAACACCTTCGTATCTGATCTCG
____________________________________________________________
consensus AGGCCGATACTGGACTCATCGGTGTTGATGTTGTACAGAACACCTTCGTATCTGATCTCG
. : . : . : . : . : . :
JMFS098B06+ CTCTTCGACGTCAAGCTAATCAGACTGCCAATGTAGGAATCGGGCGATGCACCAGATCTA
JMSF026E18+ CTCTTCGACGTCAAGCTAATCAGACTGCCAATGTAGGAATCGGGCGATGCACCAGATCTA
JMFN004E19+ CTCTTCGACGTCAAGCTAATCAGACTGCCAATGTAGGAATCGGGCGATGCACCAGATCTA
JMSF007G14+ CTCTTCGACGTCAAGCTAATCAGACTGCCAATGTAGGAATCGGGCGATGCACCAGATCTA
JMFF022G21+ CTCTTCGACGTCAAGCTAATCAGACTGCCAATGTAGGAATCGGGCGATGCACCAGATCTA
____________________________________________________________
consensus CTCTTCGACGTCAAGCTAATCAGACTGCCAATGTAGGAATCGGGCGATGCACCAGATCTA
. : . : . : . : . : . :
JMFS098B06+ GGCGCCGATGAAGAACTCTCTGCCGCCATGCTCGGCCACTGAAATCATCCACCGCGAGAA
JMSF026E18+ GGCGCCGATGAAGAACTCTCTGCCGCCATGCTCGGCCACTGAAATCATCCACCGCGAGAA
JMFN004E19+ GGCGCCGATGAAGAACTCTCTGCCGCCATGCTCGGCCACTGAAATCATCCACCGCGAGAA
JMSF007G14+ GGCGCCGATGAAGAACTCTCTGCCGCCATGCTCGGCCACTGAAATCATCCACCGCGAGAA
JMFF022G21+ GGCGCCGATGAAGAACTCTCTGCCGCCATGCTCGGCCACTGAAATCATCCACCGCGAGAA
JMSF006E23+ CATGCTCGGCCACTGAAATCATCCACCGCGAGAA
____________________________________________________________
consensus GGCGCCGATGAAGAACTCTCTGCCGCCATGCTCGGCCACTGAAATCATCCACCGCGAGAA
. : . : . : . : . : . :
JMFS098B06+ AGAGATGACTCTACAATTTGACTGTGTTTGAAGATGGAGATTGGG
JMSF026E18+ AGAGATGACTCTACAATTTGACTGTGTTTGAAGATGGAGATTGGGGGAGAAGACC
JMFN004E19+ AGAGATGACTCTACAATTTGACTGTGTTTGAAGATGGAGATTGGGGGAGAAGACCGGAGG
JMSF007G14+ AGAGATGACTCTACAATTTGACTGTGTTTGAAGATGGAGATTGGGGGAGAAGACCGGAGG
JMFF022G21+ AGAGATGACTCTACAATTTGACTGTGTTTGAAGATGGAGATTGGGGGAGAAGACCGGAGG
JMSF006E23+ AGAGATGACTNTACAATTNGACTGTGTNTGAAGATGGAGATTGGGGGAGAAGACCGGAGG
____________________________________________________________
consensus AGAGATGACTCTACAATTTGACTGTGTTTGAAGATGGAGATTGGGGGAGAAGACCGGAGG
. : . : . : . : . : . :
JMFN004E19+ AGACGGGGGATTGAAGAAAATTAGATTTAGGGTTTC
JMSF007G14+ AGACGGGGGATTGAAGAAAATTAGATTTAGGGTTTC
JMFF022G21+ AGACGGGGGATTGAAGAAAATTAGATTTAGGGTTTCGGTTTCGCCACATTGAGGGTCG
JMSF006E23+ AGACGGGGGATTGAAGAAANTTNGATNTAGGGTTTCGGTTTCGCCACATNGAGGGTCGTC
____________________________________________________________
consensus AGACGGGGGATTGAAGAAAATTAGATTTAGGGTTTCGGTTTCGCCACATTGAGGGTCGTC