Contig 004911:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017C16Sequence147004911 (6)797004086 (11)ref|XP_009628300.1|3e-106PREDICTED: signal recognition particle 54 kDa protein 2 [Nicotiana tomentosifor
JMFF025I13Sequence156004911 (6)663004086 (11)ref|XP_009628300.1|3e-71PREDICTED: signal recognition particle 54 kDa protein 2 [Nicotiana tomentosifor
JMFF040K12Sequence147004911 (6)753004086 (11)ref|XP_009764811.1|9e-96PREDICTED: signal recognition particle 54 kDa protein 2 [Nicotiana sylvestris]
JMSF001M23Sequence147004911 (6)682004086 (11)ref|XP_009628300.1|5e-97PREDICTED: signal recognition particle 54 kDa protein 2 [Nicotiana tomentosifor
JMSF017D13Sequence149004911 (6)735004086 (11)ref|XP_009764811.1|5e-98PREDICTED: signal recognition particle 54 kDa protein 2 [Nicotiana sylvestris]
JMSF051I22Sequence145004911 (6)729004086 (11)ref|XP_009764811.1|1e-115PREDICTED: signal recognition particle 54 kDa protein 2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF040K12+ AGAGAGAGAGAGAGAGAGAGAGA
JMFF017C16+ AGAGAGAGAGAGAGAGAGAGAGA
JMSF017D13+ GATANGAGAGAGAGAGAGAGAGAGAGAGA
JMSF051I22+ GAGAGAGAGAGAGAGAGAGA
JMSF001M23+ AGAGAGAGAGAGAGAGAGAGAGA
                      ____________________________________________________________
consensus GATANGAGAGAGAGAGAGAGAGAGAGAGA
 
. : . : . : . : . : . :
JMFF040K12+ GAGAGAGAGAGAGAGAGAGAGAGAAATTTATGTCCCCGGCGCCGGCGATCAGGATGCGAC
JMFF025I13+ AAATTTATGTCCCCGGCGCCGGCGATCAGGATGCGAC
JMFF017C16+ GAGAGAGAGAGAGAGAGAGAGAGAAATTTATGTCCCCGGCGCCGGCGATCAGGATGCGAC
JMSF017D13+ GAGAGAGAGAGAGAGAGAGAGAGAAATTTATGTCCCCGGCGCCGGCGATCAGGATGCGAC
JMSF051I22+ GAGAGAGAGAGAGAGAGAGAGAGAAATTTATGTCCCCGGCGCCGGCGATCAGGATGCGAC
JMSF001M23+ GAGAGAGAGAGAGAGAGAGAGAGAAATTTATGTCCCCGGCGCCGGCGATCAGGATGCGAC
                      ____________________________________________________________
consensus GAGAGAGAGAGAGAGAGAGAGAGAAATTTATGTCCCCGGCGCCGGCGATCAGGATGCGAC
 
. : . : . : . : . : . :
JMFF040K12+ CTCCTCCGACTCACAATATCTCCAGCCTCCGGCGCCCTGCCAATTAATTAAACTGCACT
JMFF025I13+ CTCCTCCGACTCACAATATCTCCAGCCTCCGGCGCCCTGCCAATTAATTAAACTG
JMFF017C16+ CTCCTCCGACTCACAATATCTCCAGCCTCCGGCGCCCTGCCAATTAATTAAACTGCACT
JMSF017D13+ CTCCTCCGACTCACAATATCTCCAGCCTCCGGCGCCCTGCCAATTAATTAAACTGCACT
JMSF051I22+ CTCCTCCGACTCACAATATCTCCAGCCTCCGGCGCCCTGCCAATTAATTAAACTGCACT
JMSF001M23+ CTCCTCCGACTCACAATATCTCCAGCCTCCGGCGCCCTGCCAATTAATTAAACTGCACTC
                      ____________________________________________________________
consensus CTCCTCCGACTCACAATATCTCCAGCCTCCGGCGCCCTGCCAATTAATTAAACTGCACTC