| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF034F07 | Sequence | 569 | 004906 (11) | ref|XP_004241792.1| | 1e-81 | PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l | 748 | 013756 (7) | ref|XP_007011772.1| | 8e-92 | TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca |
| JMFS077G06 | Sequence | 627 | 004906 (11) | ref|XP_004241792.1| | 8e-95 | PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l | |||||
| JMFS090C01 | Sequence | 620 | 004906 (11) | ref|XP_004241792.1| | 5e-102 | PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l | |||||
| JMFS112D11 | Sequence | 622 | 004906 (11) | ref|XP_004241792.1| | 4e-94 | PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l | |||||
| JMFS156A07 | Sequence | 626 | 004906 (11) | ref|XP_009618489.1| | 7e-103 | PREDICTED: trafficking protein particle complex subunit 9 isoform X2 [Nicotiana | |||||
| JMSF001F12 | Sequence | 382 | 004906 (11) | ref|XP_009778819.1| | 3e-40 | PREDICTED: trafficking protein particle complex subunit 9 isoform X2 [Nicotiana | 706 | 013756 (7) | ref|XP_007011772.1| | 4e-90 | TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca |
| JMSF016I20 | Sequence | 496 | 004906 (11) | ref|XP_004241792.1| | 3e-50 | PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l | 710 | 013756 (7) | ref|XP_007011772.1| | 2e-88 | TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca |
| JMSF024A02 | Sequence | 606 | 004906 (11) | ref|XP_004241792.1| | 1e-85 | PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l | 670 | 013756 (7) | ref|XP_007011772.1| | 5e-81 | TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca |
| JMSF030M03 | Sequence | 654 | 004906 (11) | ref|XP_009618489.1| | 2e-105 | PREDICTED: trafficking protein particle complex subunit 9 isoform X2 [Nicotiana | 704 | 013756 (7) | ref|XP_007011772.1| | 2e-89 | TRS120 isoform 1 [Theobroma cacao] gb|EOY29391.1| TRS120 isoform 1 [Theobroma ca |
| JMSF042I19 | Sequence | 609 | 004906 (11) | ref|XP_004241792.1| | 1e-85 | PREDICTED: trafficking protein particle complex subunit 9 isoform X1 [Solanum l | 396 | 013756 (7) | ref|XP_010322725.1| | 3e-51 | PREDICTED: uncharacterized protein LOC101266526 isoform X2 [Solanum lycopersicu |
| JMSF052I04 | Sequence | 662 | 004906 (11) | ref|XP_009618489.1| | 8e-107 | PREDICTED: trafficking protein particle complex subunit 9 isoform X2 [Nicotiana | 673 | 004563 (12) | ref|XP_009605477.1| | 5e-94 | PREDICTED: 40S ribosomal protein S11-like [Nicotiana tomentosiformis] ref|XP_009 |
This contig is upended
. : . : . : . : . : . :
JMSF052I04+ AAGAACCCATTTTTCAAATTCCATCAACAGTGAGGCAGCAA
JMFS090C01+ AACAGTGAGGCAGCAA
JMFS156A07+ AATTCCATCAACAGTGAGGCAGCAA
JMSF030M03+ TTTTCAAATTCCATCAACAGTGAGGCAGCAA
____________________________________________________________
consensus AAGAACCCATTTTTCAAATTCCATCAACAGTGAGGCAGCAA
. : . : . : . : . : . :
JMSF052I04+ TATCTTGCATCATAGTTTGCAAGTGGAACTCCTGAGTCAGTCTATCTGCTGGTGGAAACA
JMFS090C01+ TATCTTGCATCATAGTTTGCAAGTGGAACTCCTGAGTCAGTCTATCTGCTGGTGGAAACA
JMFS156A07+ TATCTTGCATCATAGTTGNCAAGTGGAACTCCTGAGTCAGTCTATCTGCTGGTGGAAACA
JMSF030M03+ TATCTTGCATCATAGTTTGCAAGTGGAACTCCTGAGTCAGTCTATCTGCTGGTGGAAACA
JMFS112D11+ GCAAGTGGAACTCCTGAGTCAGTCTATCTGCTGGTGGAAACA
JMFS077G06+ TTTGCAAGTGGAACTCCTGAGTCAGTCTATCTGCTGGTGGAAACA
JMSF024A02+ GGTGGAAACA
JMSF042I19+ GGTGGAAACA
____________________________________________________________
consensus TATCTTGCATCATAGTTTGCAAGTGGAACTCCTGAGTCAGTCTATCTGCTGGTGGAAACA
. : . : . : . : . : . :
JMSF052I04+ AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
JMFS090C01+ AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
JMFS156A07+ AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
JMSF030M03+ AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
JMFS112D11+ AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
JMFS077G06+ AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
JMFF034F07+ CTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
JMSF024A02+ AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
JMSF042I19+ AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
____________________________________________________________
consensus AAACTATGTTGCTGCCTTTGTAAGCATCATCCTCTAGCTGAGAATCTCCGGGGCAGAAGG
. : . : . : . : . : . :
JMSF052I04+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMFS090C01+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMFS156A07+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMSF030M03+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMFS112D11+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMFS077G06+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMFF034F07+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMSF024A02+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMSF042I19+ CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
JMSF016I20+ AAACGTTAAATTGNTCGG
____________________________________________________________
consensus CGAAACAGCGTTGAACTAGTGAAGACGAGTAACCCTTACAGGAAACGTTAAATTGCTCGG
. : . : . : . : . : . :
JMSF052I04+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMFS090C01+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMFS156A07+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMSF030M03+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMFS112D11+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMFS077G06+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMFF034F07+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMSF024A02+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMSF042I19+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
JMSF016I20+ CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATC-
____________________________________________________________
consensus CGACGGAATTGAGATCAGGAGACGAAGGGCAGTGGCAAATGCCAAGGACCGCGAGGATCT
. : . : . : . : . : . :
JMSF052I04+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMFS090C01+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMFS156A07+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMSF030M03+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMFS112D11+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMFS077G06+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMFF034F07+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMSF024A02+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMSF042I19+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCNCCGGCCATGAACTTGA
JMSF016I20+ TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
JMSF001F12+ AGAGCCGCCGGCCATGAACTTGA
____________________________________________________________
consensus TACGATTGGACTGGAAGTCCTCCCAAGGGCTAGCAGGAGAGCCGCCGGCCATGAACTTGA
. : . : . : . : . : . :
JMSF052I04+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMFS090C01+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMFS156A07+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMSF030M03+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMFS112D11+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMFS077G06+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMFF034F07+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMSF024A02+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMSF042I19+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMSF016I20+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
JMSF001F12+ ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
____________________________________________________________
consensus ACCGAAGGCTGCCGGAATCCCAAGGCTGGTGAGAGAAGGGAGACTTCTGGTGCTCCGTGT
. : . : . : . : . : . :
JMSF052I04+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMFS090C01+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMFS156A07+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMSF030M03+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMFS112D11+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMFS077G06+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMFF034F07+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMSF024A02+ AGAAGGAGCTGATGGAGGAGAGCTATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMSF042I19+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMSF016I20+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
JMSF001F12+ AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
____________________________________________________________
consensus AGAAGGAGCTGATGGAGGAGAGCGATACAGTGTGGTGGCGGACCAGCATGGAGGTGTAAT
. : . : . : . : . : . :
JMSF052I04+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMFS090C01+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMFS156A07+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMSF030M03+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMFS112D11+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMFS077G06+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMFF034F07+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMSF024A02+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMSF042I19+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMSF016I20+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
JMSF001F12+ CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
____________________________________________________________
consensus CTCGGAAGAGCGGGATCGGAATTGACCCGATTGGGAGCACCGCCACACGGATCATGCAGC
. : . : . : . : . : . :
JMSF052I04+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMFS090C01+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMFS156A07+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMSF030M03+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMFS112D11+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMFS077G06+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMFF034F07+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMSF024A02+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMSF042I19+ TCGTCTNGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMSF016I20+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
JMSF001F12+ TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
____________________________________________________________
consensus TCGTCTCGATGCTCACATCCGGCTCCATTATTAGTGAGTCGGAAATCGGTGGACGGCGGC
. : . : . : . : . : . :
JMSF052I04+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMFS090C01+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMFS156A07+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMSF030M03+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMFS112D11+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMFS077G06+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMFF034F07+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMSF024A02+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMSF042I19+ NGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMSF016I20+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
JMSF001F12+ CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
____________________________________________________________
consensus CGTAGCAAGGCGGCAGACGGTGGTGGAAAGGGAGATGAAACCGCTTAGCCCGTAGATCGC
. : . : . : . : . : . :
JMSF052I04+ GGAGTG-AACATTGCAGTTAC
JMFS090C01+ GGAG
JMFS156A07+ G
JMSF030M03+ GGAGTG-AACATTGCAGTTAC
JMFS112D11+ GGAGTG-AACATTGCAGTTACAGACTTGCAGATGCGGATCC
JMFS077G06+ GGAGTG-AACATTGCAGTTACAGACTTGCAGATGCGGATCCAA
JMFF034F07+ GGAGTG-AACATTGCAGTTACAGACTTGCAGATGCGGATCCAATT
JMSF024A02+ GGAGTGAAACATTGCAGTTACAGACTTGCAGATGCGGATCCAATTGTTTTTTGC
JMSF042I19+ GGAGTG-AACATTGCAGTTACAGACTTGCAGATGCGGATCCAATTGTTTTTTGC
JMSF016I20+ GGAGTG-AACATTGCAGTTACAGACTTGCAGATGCGGATCCAATTGTTTTTTGC
JMSF001F12+ GGAGTG-AACATTGCAGTTACAGACTTGCAGATGCGGATCCAATTGTTTTTTGCTAACTC
____________________________________________________________
consensus GGAGTG-AACATTGCAGTTACAGACTTGCAGATGCGGATCCAATTGTTTTTTGCTAACTC