Contig 004902:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS001B09Sequence634004902 (4)ref|XP_009592115.1|5e-66PREDICTED: conserved oligomeric Golgi complex subunit 3-like isoform X3 [Nicoti
JMFS015D09Sequence563004902 (4)ref|XP_009592115.1|2e-52PREDICTED: conserved oligomeric Golgi complex subunit 3-like isoform X3 [Nicoti
JMFS050C01Sequence259004902 (4)
JMFS169D10Sequence616004902 (4)ref|XP_009592115.1|3e-52PREDICTED: conserved oligomeric Golgi complex subunit 3-like isoform X3 [Nicoti

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS001B09+ TTCATCCACCTGATGAAGT
                      ____________________________________________________________
consensus TTCATCCACCTGATGAAGT
 
. : . : . : . : . : . :
JMFS015D09+ ATGCTGATACTTCTCT
JMFS001B09+ ATTCCATCACATGTTGGTATCTGCTCAGTCAAGTTGTTAACATAATGCTGATACTTCTCT
JMFS169D10+ ATGCTGATACTTCTCT
                      ____________________________________________________________
consensus ATTCCATCACATGTTGGTATCTGCTCAGTCAAGTTGTTAACATAATGCTGATACTTCTCT
 
. : . : . : . : . : . :
JMFS015D09+ TCTGTCTCTGATTTCATGGCTGCCTCAAGATCCATAAACCATTTGTAGAACTGATTGGTG
JMFS001B09+ TCTGTCTCTGATTTCATGGCTGCCTCAAGATCCATAAACCATTTGTAGAACTGATTGGTG
JMFS169D10+ TCTGTCTCTGATTTCATGGCTGCCTCAAGATCCATAAACCATTTGTAGAACTGATTGGTG
                      ____________________________________________________________
consensus TCTGTCTCTGATTTCATGGCTGCCTCAAGATCCATAAACCATTTGTAGAACTGATTGGTG
 
. : . : . : . : . : . :
JMFS015D09+ TTGACCAAGACAGTCTCAATGGCCCCACCATCCTCCATAGCATTTTGCTTTGCTGAATTG
JMFS001B09+ TTGACCAAGACAGTCTCAATGGCCCCACCATCCTCCATAGCATTTTGCTTTGCTGAATTG
JMFS169D10+ TTGACCAAGACAGTCTCAATGGCCCCACCATCCTCCATAGCATTTTGCTTTGCTGAATTG
                      ____________________________________________________________
consensus TTGACCAAGACAGTCTCAATGGCCCCACCATCCTCCATAGCATTTTGCTTTGCTGAATTG
 
. : . : . : . : . : . :
JMFS015D09+ GAGAAACCATTGTGGTGTCCAAGAGCATGATCCTGAGACAAATTGGCAGGAAAAGGTCGC
JMFS001B09+ GAGAAACCATTGTGGTGTCCAAGAGCATGATCCTGAGACAAATTGGCAGGAAAAGGTCGC
JMFS169D10+ GAGAAACCATTGTGGTGTCCAAGAGCATGATCCTGAGACAAATTGGCAGGAAAAGGTCGC
                      ____________________________________________________________
consensus GAGAAACCATTGTGGTGTCCAAGAGCATGATCCTGAGACAAATTGGCAGGAAAAGGTCGC
 
. : . : . : . : . : . :
JMFS015D09+ TCTGCAACGGCATGAGAAAGTGACTGAATAGCTGCTTGCTGCTGCTCTGTCAATGGAGCA
JMFS001B09+ TCTGCAACGGCATGAGAAAGTGACTGAATAGCTGCTTGCTGCTGCTCTGTCAATGGAGCA
JMFS169D10+ TCTGCAACGGCATGAGAAAGTGACTGAATAGCTGCTTGCTGCTGCTCTGTCAATGGAGCA
                      ____________________________________________________________
consensus TCTGCAACGGCATGAGAAAGTGACTGAATAGCTGCTTGCTGCTGCTCTGTCAATGGAGCA
 
. : . : . : . : . : . :
JMFS015D09+ TTCTGTTCCCAAGTAGAAGCGAAGTTGTATCCTTTGGAAATGGCTTCCGACTTGGGTACA
JMFS050C01+ TTGGAAATGGCTTCCGTCTTGGGTTCA
JMFS001B09+ TTCTGTTCCCAAGTAGAAGCGAAGTTGTATCCTTTGGAAATGGCTTCCGACTTGGGTACA
JMFS169D10+ TTCTGTTCCCAAGTAGAAGCGAAGTTGTATCCTTTGGAAATGGCTTCCGACTTGGGTACA
                      ____________________________________________________________
consensus TTCTGTTCCCAAGTAGAAGCGAAGTTGTATCCTTTGGAAATGGCTTCCGACTTGGGTACA
 
. : . : . : . : . : . :
JMFS015D09+ ACTGCGGTCCCTGCCGCTTTAGTCGTCGCCATTTTCCTTTTCTCTACTACGGAGGCAGCT
JMFS050C01+ AATGCGGTCCCTGCCGCATTAGTTGTCGCCATTTTCCTTTTGTGTACTACGGAGGCAGCA
JMFS001B09+ ACTGCGGTCCCTGCCGCTTTAGTCGTCGCCATTTTCCTTTTCTCTACTACGGAGGCAGCT
JMFS169D10+ ACTGCGGTCCCTGCCGCTTTAGTCGTCGCCATTTTCCTTTTCTCTACTACGGAGGCAGCT
                      ____________________________________________________________
consensus ACTGCGGTCCCTGCCGCTTTAGTCGTCGCCATTTTCCTTTTCTCTACTACGGAGGCAGCT
 
. : . : . : . : . : . :
JMFS015D09+ CAATTTACGTCTTAGATTTAGTGGAACATTCACGTAGCAAACACGTAATACAGATATAGA
JMFS050C01+ CAATTTACGTCTTAGATTTAGTGGAACATTCACGTAGCAAACACGTAATACAGATATAGA
JMFS001B09+ CAATTTACGTCTTAGATTTAGTGGAACATTCACGTAGCAAACACGTAATACAGATATAGA
JMFS169D10+ CAATTTACGTCTTAGATTTAGTGGAACATTCACGTAGCAAACACGTAATACAGATATAGA
                      ____________________________________________________________
consensus CAATTTACGTCTTAGATTTAGTGGAACATTCACGTAGCAAACACGTAATACAGATATAGA
 
. : . : . : . : . : . :
JMFS015D09+ AGCAGAGAGCAGCTGCAGTGTCACCACTCTGTTTCTATCCACCCGGGAAGGTCGGTCGGT
JMFS050C01+ AGCAGAGAGCAGCTGCAGTGTCACCACTCTGTTTCAATCCACCCGGGAAGGTCGGTCGGT
JMFS001B09+ AGCAGAGAGCAGCTGCAGTGTCACCACTCTGTTTCTATCCACCCGGGAAGGTCGGTCGGT
JMFS169D10+ AGCAGAGAGCAGCTGCAGTGTCACCACTCTGTTTCTATCCACCCGGGAAGGTCGGTCGGT
                      ____________________________________________________________
consensus AGCAGAGAGCAGCTGCAGTGTCACCACTCTGTTTCTATCCACCCGGGAAGGTCGGTCGGT
 
. : . : . : . : . : . :
JMFS015D09+ TTGCACTAAAACGAAGAGTACAAACCAGTATGTTCTCCGGACGCTCAAACCAGTACCTTC
JMFS050C01+ TTGCACTAAAACGAAGAGTACAAACCAGTATGTTCTCCGGACGCTCAAACCA
JMFS001B09+ TTGCACTAAAACGAAGAGTACAAACCAGTATGTTCTCCGGACGCTCAAACCAGTACCTTC
JMFS169D10+ TTGCACTAAAACGAAGAGTACAAACCAGTATGTTCTCCGGACGCTCAAACCAGTACCTTC
                      ____________________________________________________________
consensus TTGCACTAAAACGAAGAGTACAAACCAGTATGTTCTCCGGACGCTCAAACCAGTACCTTC
 
. : . : . : . : . : . :
JMFS015D09+ TCCGGC
JMFS001B09+ TCCGGCGGGTTTACG
JMFS169D10+ TCCGGCGGGTTTACGGCAGTTTTCGGTAATTTTATTACGAAGAAGAAGAGGTTGGAATAC
                      ____________________________________________________________
consensus TCCGGCGGGTTTACGGCAGTTTTCGGTAATTTTATTACGAAGAAGAAGAGGTTGGAATAC