Contig 004894:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP020A07Sequence323017296ref|XP_007034941.1|4e-31Kinase family protein / peptidoglycan-binding LysM domain-containing protein [T158004894 (2)ref|XP_010274212.1|1e-12PREDICTED: protein LYK5-like [Nelumbo nucifera]
JMFS163H10Sequence617004894 (2)ref|XP_006489496.1|4e-57PREDICTED: lysM domain receptor-like kinase 4-like [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMCP020A07+ TGTCGCGGGGGTGTCGGAAACCTGctCC
JMFS163H10+ TGTCGGAAACCTGGACC
                      ____________________________________________________________
consensus TGTCGCGGGGGTGTCGGAAACCTGGACC
 
. : . : . : . : . : . :
rJMCP020A07+ GGGTtccactactcGAGATTCCTCCGGTagaGCAAGTCCGTGGAATTGGGGCACTTGCAG
JMFS163H10+ GGGTAGGTGATGAGGAGATTCCTCCGGTTCTGCAAGTCCGTGGAATTGGGGCACTTGCAG
                      ____________________________________________________________
consensus GGGTAGGTGATGAGGAGATTCCTCCGGTTCTGCAAGTCCGTGGAATTGGGGCACTTGCAG
 
. : . : . : . : . : . :
rJMCP020A07+ AAGATCGGGAAAGTTATATGGTCGCCGGGCTGAAGATCGGTGACCACCGCCGTGGGATTG
JMFS163H10+ AAGATCGGGAAAGTTATATGGTCGCCGGGCTGAAGATCGGTGACCACCGCCGTGGGATTG
                      ____________________________________________________________
consensus AAGATCGGGAAAGTTATATGGTCGCCGGGCTGAAGATCGGTGACCACCGCCGTGGGATTG
 
. : . : . : . : . : . :
rJMCP020A07+ ACGACGATGG
JMFS163H10+ ACGACGATGGCGGATTGGAAGCTGGTGAGGTCTCCGTATTCCAGGGTGGACACTCTGTAG
                      ____________________________________________________________
consensus ACGACGATGGCGGATTGGAAGCTGGTGAGGTCTCCGTATTCCAGGGTGGACACTCTGTAG
 
. : . : . : . : . : . :
JMFS163H10+ AAAGTGTCGCCGGGAACTATGGTGTGGTCGAGAGGGGCATAGGAGATGCTACCGAAAGTG
                      ____________________________________________________________
consensus AAAGTGTCGCCGGGAACTATGGTGTGGTCGAGAGGGGCATAGGAGATGCTACCGAAAGTG
 
. : . : . : . : . : . :
JMFS163H10+ GAGTTAACGGTGTTGCAGGAACAGGAGATGGGGATAAAGAGGGATTGGTTGGCTTGGAGG
                      ____________________________________________________________
consensus GAGTTAACGGTGTTGCAGGAACAGGAGATGGGGATAAAGAGGGATTGGTTGGCTTGGAGG
 
. : . : . : . : . : . :
JMFS163H10+ GTGGCGTTTGCGGCGGAGATATTGCTGGCTTCTGCGATCATGCGGCGGCTGACGGAGAAG
                      ____________________________________________________________
consensus GTGGCGTTTGCGGCGGAGATATTGCTGGCTTCTGCGATCATGCGGCGGCTGACGGAGAAG
 
. : . : . : . : . : . :
JMFS163H10+ AGGTCTCCTATGGCGGCCAGGTCGAGGAAATTGGGGGCGGTGGCGGTGTAAAAAGCGTAG
                      ____________________________________________________________
consensus AGGTCTCCTATGGCGGCCAGGTCGAGGAAATTGGGGGCGGTGGCGGTGTAAAAAGCGTAG
 
. : . : . : . : . : . :
JMFS163H10+ GTTTTGCAGGGATAGCTCTGGTTGATATTGCAGGCATAGCCGGTGGTGTTTGGTTGGGCT
                      ____________________________________________________________
consensus GTTTTGCAGGGATAGCTCTGGTTGATATTGCAGGCATAGCCGGTGGTGTTTGGTTGGGCT
 
. : . : . : . : . : . :
JMFS163H10+ TGGGCATAGTGTTGGCTAAGATTGAAGAAGAAGAAGAAGAAGAAGATTAGAAATGCAGCT
                      ____________________________________________________________
consensus TGGGCATAGTGTTGGCTAAGATTGAAGAAGAAGAAGAAGAAGAAGATTAGAAATGCAGCT
 
. : . : . : . : . : . :
JMFS163H10+ ATGGGGTTGTATGAGATTTTCATTTTTGTTTGGTATTGGACTATTGGGGACGTTGCATAT
                      ____________________________________________________________
consensus ATGGGGTTGTATGAGATTTTCATTTTTGTTTGGTATTGGACTATTGGGGACGTTGCATAT