Contig 004886:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049K17Sequence513004886 (5)ref|XP_009762413.1|9e-17PREDICTED: uncharacterized protein LOC104214449 isoform X3 [Nicotiana sylvestri
JMFS076E05Sequence677004886 (5)ref|XP_009762413.1|2e-44PREDICTED: uncharacterized protein LOC104214449 isoform X3 [Nicotiana sylvestri
JMFS091H09Sequence607004886 (5)ref|XP_009762413.1|3e-26PREDICTED: uncharacterized protein LOC104214449 isoform X3 [Nicotiana sylvestri
JMFS130C09Sequence561004886 (5)ref|XP_009762413.1|4e-27PREDICTED: uncharacterized protein LOC104214449 isoform X3 [Nicotiana sylvestri
JMFS158B05Sequence477004886 (5)ref|XP_009762413.1|3e-10PREDICTED: uncharacterized protein LOC104214449 isoform X3 [Nicotiana sylvestri

Alignment

This contig is upended


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JMFS076E05+                            CAGCAAACCAAAGATAATCTCATCGCCTGAGTTGAGAACATGA
                      ____________________________________________________________
consensus                              CAGCAAACCAAAGATAATCTCATCGCCTGAGTTGAGAACATGA
 
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JMFS076E05+           GTAGTATTTNTCCTAATTGTCTTCCCATTTACTTGCACAGATCCTTTCTTCCCCTTGCTC
                      ____________________________________________________________
consensus             GTAGTATTTNTCCTAATTGTCTTCCCATTTACTTGCACAGATCCTTTCTTCCCCTTGCTC
 
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JMFS076E05+           TCAAGAACAGCAACCGAATTGCCTTCTTGCTGTGTAAGTCTTATTGTACACAAGATGCCA
JMFS130C09+                                        CTGTGTAAGTCTAATTGTACACAAAATGCCA
JMFS091H09+                                        CTGTGTAAGTCTTATTGTACACAAGATGCCA
                      ____________________________________________________________
consensus             TCAAGAACAGCAACCGAATTGCCTTCTTGCTGTGTAAGTCTTATTGTACACAAGATGCCA
 
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JMFS076E05+           CTAACTGTTTGGTCCTTTATTAAAAGATTTGCAGACTTGTGGGAGCCAACCGAGAAATTT
JMFS130C09+           CTAACTGTTTGGTCCTTTATTAAAAGATTTGCAGACTTGTGGGAGCCAACCGAGAAATTT
JMFS091H09+           CTAACTGTTTGGTCCTTTATTAAAAGATTTGCAGACTTGTGGGAGCCAACCGAGAAATTT
JMFF049K17+                          TTTATTAAAAGATTTGCAGACTTGTGGGAGCCAACCGAGAAATTT
                      ____________________________________________________________
consensus             CTAACTGTTTGGTCCTTTATTAAAAGATTTGCAGACTTGTGGGAGCCAACCGAGAAATTT
 
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JMFS076E05+           GACAAACTGATTGACATAGTTGAGTTCTGCGGATACTCTGACAGGAGCCTACACCAGGGC
JMFS130C09+           GACAAACTGATTGACATAGTTGAGTTCTGCGGATACTCTGACAGGAGCCTACACCAGGGC
JMFS091H09+           GACAAACTGATTGACATAGTTGAGTTCTGCGGATACTCTGACAGGAGCCTACACCAGGGC
JMFF049K17+           GACAAACTGATTGACATAGTGNAGTTCTGCGGATACTCTGACAGGAGCCTACACCAGGGC
JMFS158B05+              AAACTGATTGACATAGTTGAGTTTTGCGGATACTCTGACAGGAGCCTACACCAGGGC
                      ____________________________________________________________
consensus             GACAAACTGATTGACATAGTTGAGTTCTGCGGATACTCTGACAGGAGCCTACACCAGGGC
 
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JMFS076E05+           GTCTTCATTATTTCACTACCCCTCCTTACCAAGGCTAAGGAGCAGGGTTTTTCAACTATT
JMFS130C09+           GTCTTCATTATTTCACTACCCCTCCTTACCAAGGCTAAGGAGCAGGGTTTTTCAACTATT
JMFS091H09+           GTCTTCATTATTTCACTACCCCTCCTTACCAAGGCTAAGGAGCAGGGTTTTTCAACTATT
JMFF049K17+           GTCTTCATTATTTCACTACCCCTCCTTACCAAGGCTAAGGAGCAGGGTTTTTCAACTATT
JMFS158B05+           GTCTTCATTATTTCACTACCCCTCCTTACCAAGGCTAAGGAGCAGGGTTTTTCAACTATT
                      ____________________________________________________________
consensus             GTCTTCATTATTTCACTACCCCTCCTTACCAAGGCTAAGGAGCAGGGTTTTTCAACTATT
 
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JMFS076E05+           ATAGGGGTAACACCTTGCGGTACAGGTGTAGCAACGGAGACGGCGGTCGTGTCTTCTGCC
JMFS130C09+           ATAGGGGTAACACCTTGCGGTACAGGTGTAGCAACGGAGACGGCGGTCGTGTCTTCTGCC
JMFS091H09+           ATAGGGGTAACACCTTGCGGTACAGGTGTAGCAACGGAGACGGCGGTCGTGTCTTCTGCC
JMFF049K17+           ATAGGGGTAACACCTTGCGGTACAGGTGTAGCAACGGAGACGGCGGTCGTGTCTTCTGCC
JMFS158B05+           ATAGGGGTAACACCTTGCGGTACAGGTGTAGCAACGGAGACGGCGGTCGTGTCTTCTGCC
                      ____________________________________________________________
consensus             ATAGGGGTAACACCTTGCGGTACAGGTGTAGCAACGGAGACGGCGGTCGTGTCTTCTGCC
 
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JMFS076E05+           TTGGGGGAGGACGCGCCGCCATCCGCCGCGGCGGCTTCGGGCGGTGGACCAGTTGAGCTG
JMFS130C09+           TTGGGGGAGGACGCGCCGCCATCCGCCGCGGCGGCTTCGGGCGGTGGACCAGTTGAGCTG
JMFS091H09+           TTGGGGGAGGACGCGCCGCCATCCGCCGCGGCGGCTTCGGGCGGTGGACCAGTTGAGCTG
JMFF049K17+           TTGGGGGAGGACGCGCCGCCATCCGCCGCGGCGGCTTCGGGCGGTGGACCAGTTGAGCTG
JMFS158B05+           TTGGGGGAGGACGCGCCGCCATCCGCCGCGGCGGCTTCGGGCGGTGGACCAGTTGAGCTG
                      ____________________________________________________________
consensus             TTGGGGGAGGACGCGCCGCCATCCGCCGCGGCGGCTTCGGGCGGTGGACCAGTTGAGCTG
 
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JMFS076E05+           GACTCCTTGGGATTCTCCGCCGGAGCCGTCGATTTCTCCGACGAATCGGCATTATCATTC
JMFS130C09+           GACTCCTTGGGATTCTCCGCCGGAGCCGTCGATTTCTCCGACGAATCGGCATTATCATTC
JMFS091H09+           GACTCCTTGGGATTCTCCGCCGGAGCCGTCGATTTCTCCGACGAATCGGCATTATCATTC
JMFF049K17+           GACTCCTTGGGATTCTCCGCCGGAGCCGTCGATTTCTCCGACGAATCGGCATTATCATTC
JMFS158B05+           GACTCCTTGGGATTCTCCGCCGGAGCCGTCGATTTCTCCGACGAATCGGCATTATCCCTC
                      ____________________________________________________________
consensus             GACTCCTTGGGATTCTCCGCCGGAGCCGTCGATTTCTCCGACGAATCGGCATTATCATTC
 
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JMFS076E05+           TCCGCTTTATTAACAGGAAGTGACTTGTGACGCTTGGGCGACGGAGATTTATCGTCGGAC
JMFS130C09+           TCCGCTTTATTAACAGGAAGTGACTTGTGACGCTTGGGCGACGGAGATTTATCGTCGGAC
JMFS091H09+           TCCGCTTTATTAACAGGAAGTGACTTGTGACGCTTGGGCGACGGAGATTTATCGTCGGAC
JMFF049K17+           TCCGCTTTATTAACAGGAAGTGACTTGTGACGCTTGGGCGACGGAGATTTATCGTCGGAC
JMFS158B05+           TCCGCTTTATTAACAGGAAGTGACTTGTGACGCTTGGGCGACGGAGATTTATCGTCGGAC
                      ____________________________________________________________
consensus             TCCGCTTTATTAACAGGAAGTGACTTGTGACGCTTGGGCGACGGAGATTTATCGTCGGAC
 
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JMFS076E05+           GACGAGAGGGATCTCTTGTTATTGTTGGAAGTGGACGACGGCAGAGATCCACTTCGTCTT
JMFS130C09+           GACGAGAGGGATCTCTTGTTATTGTTGGAAGTGGACGACGGCAGAGATCCACTTCGTCTT
JMFS091H09+           GACGAGAGGGATCTCTTGTTATTGTTGGAAGTGGACGACGGCAGAGATCCACTTCGTCTT
JMFF049K17+           GACGAGAGGGATCTCTTGTTATTGTTGGAAGTGGACGACGGCAGAGATCCACTTCGTCTT
JMFS158B05+           GACGAGAGGGATCTCTTGTTATTGTTGGAAGTGGACGACGGCAGAGATCCACTTCGTCTT
                      ____________________________________________________________
consensus             GACGAGAGGGATCTCTTGTTATTGTTGGAAGTGGACGACGGCAGAGATCCACTTCGTCTT
 
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JMFS076E05+           GTCGAAACCATCTCTACGGAGTCTCCACACAGAG                          
JMFS130C09+           GTCGAAACCATCTCTACGGAGTCTCCACACAGAGA                         
JMFS091H09+           GTCGAAACCATCTCTACGGAGTCTCCACACAGAGA                         
JMFF049K17+           GTCGAAACCATCTCTACGGAGTCTCCACACAGAGACGAGTTCGACCC             
JMFS158B05+           GTCGAAACCATCTCTACGGAGTCTCCACACAGAGACGAGTTCGACCCGGGTGGAAAATGG
                      ____________________________________________________________
consensus             GTCGAAACCATCTCTACGGAGTCTCCACACAGAGACGAGTTCGACCCGGGTGGAAAATGG