clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFS020F11 | Sequence | 617 | 004882 (6) | gb|AAY84833.1| | 2e-110 | isoamylase [Ipomoea batatas] | |||||
JMFS154B01 | Sequence | 626 | 004882 (6) | gb|AAY84833.1| | 9e-89 | isoamylase [Ipomoea batatas] | |||||
JMFS159B03 | Sequence | 435 | 004882 (6) | gb|AAY84833.1| | 1e-75 | isoamylase [Ipomoea batatas] | |||||
JMFS166F01 | Sequence | 602 | 004882 (6) | gb|AAY84833.1| | 7e-99 | isoamylase [Ipomoea batatas] | |||||
JMSF009E01 | Sequence | 404 | 004882 (6) | gb|AAY84833.1| | 4e-64 | isoamylase [Ipomoea batatas] | 632 | 009915 (2) | gb|AAY84833.1| | 4e-78 | isoamylase [Ipomoea batatas] |
JMSF010M10 | Sequence | 271 | 004882 (6) | gb|AAY84833.1| | 3e-24 | isoamylase [Ipomoea batatas] | 790 | 009915 (2) | gb|AAY84833.1| | 5e-64 | isoamylase [Ipomoea batatas] |
This contig is upended
. : . : . : . : . : . :
JMFS020F11+ CCAAATTCTGCTCTGCTTACAATGGCCTTAGCATAAGGATCCAAAAGTATCCTAG
JMFS166F01+ AG
____________________________________________________________
consensus CCAAATTCTGCTCTGCTTACAATGGCCTTAGCATAAGGATCCAAAAGTATCCTAG
. : . : . : . : . : . :
JMFS020F11+ TTGAATCAAAGTAATGCCCTTCTTCAGGAGCAAACTTCCCATCAAAACTGTAACCATAGA
JMFS166F01+ TTGAATCAAAGTAATGCCCTTCTTCAGGAGCAAACTTCCCATCAAAACTGTAACCATAGA
JMFS154B01+ CTTCCCATCAAAACTGTAACCATAGA
____________________________________________________________
consensus TTGAATCAAAGTAATGCCCTTCTTCAGGAGCAAACTTCCCATCAAAACTGTAACCATAGA
. : . : . : . : . : . :
JMFS020F11+ GCATATTATCAAAGTCTCCCTTGAGAAATACATGCCAGACATCTCCAGTCTTATTGATAG
JMFS166F01+ GCATATTATCAAAGTCTCCCTTGAGAAATACATGCCAGACATCTCCAGTCTTATTGATAG
JMFS159B03+ AATACATGCCAGACATCTCCAGTCTTATTGATAG
JMFS154B01+ GCATATTATCANAGTCTCCCTTGAGAAATACATGCCAGACATCTCCAGTCTTATTGATAG
____________________________________________________________
consensus GCATATTATCAAAGTCTCCCTTGAGAAATACATGCCAGACATCTCCAGTCTTATTGATAG
. : . : . : . : . : . :
JMFS020F11+ ATGGATCCAAAGGAATCTGCTCCGTCACTTTTTTCTGAGGTAAGTCGGCGAGACTGATCA
JMFS166F01+ ATGGATCCAAAGGAATCTGCTCCGTCACTTTTTTCTGAGGTAAGTCGGCGAGACTGATCA
JMFS159B03+ ATGGATCCAAAGGAATCTGCTCCGTCACTTTTTTCTGAGGTAAGTCGGCGAGACTGATCA
JMSF009E01+ TCCGTCACTTTTTTCTGAGGTAAGTCGGCGAGACTGATCA
JMFS154B01+ ATGGATCCAAAGGAATCTGCTCCGTCACTTTTTTCTGAGGTAAGTCGGCGAGACTGATCA
____________________________________________________________
consensus ATGGATCCAAAGGAATCTGCTCCGTCACTTTTTTCTGAGGTAAGTCGGCGAGACTGATCA
. : . : . : . : . : . :
JMFS020F11+ AGTAGAGGGCTGCTGACGTGGCATTGCTCGAAAAGACAGCGAAATTGATCCCGCCCTCTC
JMFS166F01+ AGTAGAGGGCTGCTGACGTGGCATTGCTCGAAAAGACAGCGAAATTGATCCCGCCCTCTC
JMFS159B03+ AGTAGAGGGCTGCTGACGTGGCATTGCTCGAAAAGACAGCGAAATTGATCCCGCCCTCTC
JMSF009E01+ AGTAGAGGGCTGCTGACGTGGCATTGCTCGAAAAGACAGCGAAATTGATCCCGCCCTCTC
JMFS154B01+ AGTAGAGGGCTGCTGACGTGGCATTGCTCGAAAAGACAGCGAAATTGATCCCGCCCTCTC
____________________________________________________________
consensus AGTAGAGGGCTGCTGACGTGGCATTGCTCGAAAAGACAGCGAAATTGATCCCGCCCTCTC
. : . : . : . : . : . :
JMFS020F11+ TAGCGGTGGCGCCGAACGGTGTCGGATGCCCGGAGAAAACCTCGAAACGACGACGTAATT
JMFS166F01+ TAGCGGTGGCGCCGAACGGTGTCGGATGCCCGGAGAAAACCTCGAAACGACGACGTAATT
JMFS159B03+ TAGCGGTGGCGCCGAACGGTGTCGGATGCCCGGAGAAAACCTCGAAACGACGACGTAATT
JMSF009E01+ TAGCGGTGGCGCCGAACGGTGTCGGATGCCCGGAGAAAACCTCGAAACGACGACGTAATT
JMFS154B01+ TAGCGGTGGCGCCGAACGGTGTCGGATGCCCGGAGAAAACCTCGAAACGACGACGTAATT
____________________________________________________________
consensus TAGCGGTGGCGCCGAACGGTGTCGGATGCCCGGAGAAAACCTCGAAACGACGACGTAATT
. : . : . : . : . : . :
JMFS020F11+ CGTACGGTAGGGGCTTCTCCACCACCACCGCCGTAGTGTCGGACTCACCTACGCCATCAA
JMFS166F01+ CGTACGGTAGGGGCTTCTCCACCACCACCGCCGTAGTGTCGGACTCACCTCCGCCATCAA
JMFS159B03+ CGTACGGTAGGGGCTTCTCCACCACCACCGCCGTAGTGTCGGACTCACCTCCGCCATCAA
JMSF009E01+ CGTACGGTAGGGGCTTCTCCACCACCACCGCCGTAGTGTCGGACTCACCTCCGCCATCAA
JMSF010M10+ GTCGGACTCACNTCCGCCATCAA
JMFS154B01+ CGTACGGTAGGGGCTTCTCCACCACCACCGCCGTAGTGTCGGACTCACCTCCGCCATCAA
____________________________________________________________
consensus CGTACGGTAGGGGCTTCTCCACCACCACCGCCGTAGTGTCGGACTCACCTCCGCCATCAA
. : . : . : . : . : . :
JMFS020F11+ TGGCCGCATTAACAGCGAGCACTGAAGAAGGTCTCGCCTTTTTTCCAAATTCAGCAAAGT
JMFS166F01+ TGGCCGCATTAACAGCGAGCACTGAAGAAGGTCTCGCCTTTTTTCCAAATTCAGCAAAGT
JMFS159B03+ TGGCCGCATTAACAGCGAGCACTGAAGAAGGTCTCGCCTTTTTTCCAAATTCAGCAAAGT
JMSF009E01+ TGGCCGCATTAACAGCGAGCACTGAAGAAGGTCTCGCCTTTTTTCCAAATTCAGCAAAGT
JMSF010M10+ TGGCCGCATTAACAGCGAGCACTGAAGAAGGTCTCGCCTTTTTTCCAAATTCAGCAAAGT
JMFS154B01+ TGGCCGCATTAACAGCGAGCACTGAAGAAGGTCTCGCCTTTTTTCCAAATTCAGCAAAGT
____________________________________________________________
consensus TGGCCGCATTAACAGCGAGCACTGAAGAAGGTCTCGCCTTTTTTCCAAATTCAGCAAAGT
. : . : . : . : . : . :
JMFS020F11+ AATTCTGCAGAAACCCGAAATTTAATCCAGTTTTGCGGATGTTTGAACTTCTGGAGTGTA
JMFS166F01+ AATTCTGCAGAAACCCGAAATTTAATCCAGTTTTGCGGATGTTTGAACTTCTGGAGTGTA
JMFS159B03+ AATTCTGCAGAAACCCGAAATTTAATCCAGTTTTGCGGATGTTTGAACTTCTGGAGTGTA
JMSF009E01+ AATTCTGCAGAAACCCGAAATTTAATCCAGTTTTGCGGATGTTTGAACTTCTGGAGTGTA
JMSF010M10+ AATTCTGCAGAAACCCGAAATTTAATCCAGTTTTGCGGATGTTTGAACTTCTGGAGTGTA
JMFS154B01+ AATTCTGCAGAAACCCGAAATTTAATCCAGTTTTGCGGATGTTTGAACTTCTGGAGTGTA
____________________________________________________________
consensus AATTCTGCAGAAACCCGAAATTTAATCCAGTTTTGCGGATGTTTGAACTTCTGGAGTGTA
. : . : . : . : . : . :
JMFS020F11+ GTTTGGGGGAGTATGGTGAGATTGAAGGAGAGTGAAGCAACTCCATTTCGGAATTGAGCA
JMFS166F01+ GTTTGGGGGAGTATGGTGAGATTGAAGGAGAGTGAAGCAACTCCATTTCGGAATTGAGCA
JMFS159B03+ GTTTGGGGGAGTATGGTCAGATTGAAGGAGAGTGAAGCAAC
JMSF009E01+ GTTTGGGGGAGTATGGTGAGATTGAAGGAGAGTGAAGCAACTCCATTTCGGAATTGAGCA
JMSF010M10+ GTTTGGGGGAGTATGGTGAGATTGAAGGAGAGTGAAGCAACTCCATTTCGGAATTGAGCA
JMFS154B01+ GTTTGGGGGAGTATGGTGAGATTGAAGGAGAGTGAAGCAACTCCATTTCGGAATTGAGCA
____________________________________________________________
consensus GTTTGGGGGAGTATGGTGAGATTGAAGGAGAGTGAAGCAACTCCATTTCGGAATTGAGCA
. : . : . : . : . : . :
JMFS020F11+ AGTAATCTCATCAAAGAGTTAG
JMFS166F01+ AGTAATCTCATCAAAGAGTTAGCCTCTATACATCTCGGAGTACGTACAGATTAAGACTGC
JMSF009E01+ AG
JMSF010M10+ AGTAATCTCATCAAAGAGTTAGCCTCTATACATCTCGGAGTACGTACAGATTAAGACTGC
JMFS154B01+ AGTAATCTCATCAAAGAGTTAGCCTCTATACATCTCGGAGTACGTACAGATTAAGACTGC
____________________________________________________________
consensus AGTAATCTCATCAAAGAGTTAGCCTCTATACATCTCGGAGTACGTACAGATTAAGACTGC
. : . : . : . : . : . :
JMSF010M10+ CATCCAG
JMFS154B01+ CATCCAGACAATCAGTGATCAATTAACTTTTTCTGCGTGTCATATTAGGACAAGGGCTAG
____________________________________________________________
consensus CATCCAGACAATCAGTGATCAATTAACTTTTTCTGCGTGTCATATTAGGACAAGGGCTAG