Contig 004875:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS016A04Sequence579004875 (5)
JMFS019C03Sequence458004875 (5)
JMFS051C12Sequence581004875 (5)
JMFS073G09Sequence618004875 (5)
JMFS148C03Sequence619004875 (5)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS019C03+ AGCAAACCCATTATCCGCA
JMFS073G09+ GCA
                      ____________________________________________________________
consensus AGCAAACCCATTATCCGCA
 
. : . : . : . : . : . :
JMFS019C03+ GCTGCTACCGCAATGTGGACCGACAAAACCAACAGCTTCAACACCGACATCCTCAACATC
JMFS073G09+ GCTGCTACCGCAATGTGGACCGACAAAACCAACAGCTTCAACACCGACATCCTCAACATC
JMFS051C12+ CAACACCGACATCCTCAACATC
JMFS148C03+ TCAACACCGACATCCTCAACATC
                      ____________________________________________________________
consensus GCTGCTACCGCAATGTGGACCGACAAAACCAACAGCTTCAACACCGACATCCTCAACATC
 
. : . : . : . : . : . :
JMFS019C03+ GTACCTTATATCCTACATTCCTTAATCCATTTCTTGGAACTCACCAGTGCCACCCGAATC
JMFS073G09+ GTACCTTATATCCTACATTCCTTAATCCATTTCTTGGAACTCACCAGTGCCACCCGAATC
JMFS016A04+ ACATTCCTTAATCCATTTCTTGGAACTCACCAGTGCCACCCGAATC
JMFS051C12+ GTACCTTATATGCTACATTCCTTAATCCATTTCTTGGAACTCACCAGTGCCACCCGAATC
JMFS148C03+ GTACCTTATATCCTACATTCCTTAATCCATTTCTTGGAACTCACCAGTGCCACCCGAATC
                      ____________________________________________________________
consensus GTACCTTATATCCTACATTCCTTAATCCATTTCTTGGAACTCACCAGTGCCACCCGAATC
 
. : . : . : . : . : . :
JMFS019C03+ AATCTCGACGAAAAACTTAATAGTTCATACATCCTCCCTCCTGTCAATCTAACAACACCT
JMFS073G09+ AATCTCGACGAAAAACTTCATAGTTCATACATCCTCCCTCCTGTCAATCTAACAACACCT
JMFS016A04+ AATCTCGACGAAAAACTTCATAGTTCATACATCCTCCCTCCTGTCAATCTAACAACACCT
JMFS051C12+ AATCTCGACGAAAAACTTCATAGTTCATACATCCTCCCTCCTGTCAATCTAACAACACCT
JMFS148C03+ AATCTCGACGAAAAACTTCATAGTTCATACATCCTCCCTCCTGTCAATCTAACAACACCT
                      ____________________________________________________________
consensus AATCTCGACGAAAAACTTCATAGTTCATACATCCTCCCTCCTGTCAATCTAACAACACCT
 
. : . : . : . : . : . :
JMFS019C03+ TTCTAACACTCAATTCACTGAAATTCTCACATCCCCACTTGAAATTGGAAGAGCAGAACA
JMFS073G09+ TTCTAACACTCAATTCACTGAAATTCTCACATCCCCACTTGAAATTGGAAGAGCAGAACA
JMFS016A04+ TTCTAACACTCAATTCACTGAAATTCTCACATCCCCACTTGAAATTGGAAGAGCAGAACA
JMFS051C12+ TTCTAACACTCAATTAACTGAAATTCTCACATCCCCACTTGAAATTGGAAGAGCAGAACA
JMFS148C03+ TTCTAACACTCAATTCACTGAAATTCTCACATCCCCACTTGAAATTGGAAGAGCAGAACA
                      ____________________________________________________________
consensus TTCTAACACTCAATTCACTGAAATTCTCACATCCCCACTTGAAATTGGAAGAGCAGAACA
 
. : . : . : . : . : . :
JMFS019C03+ AACCCCAAGAACATCCACTCCTCAGATCTCATCTTTCACCCCCACAACATCCACACACAT
JMFS073G09+ AACCCCAAGAACATCCACTCCTCAGATCTCATCTTTCACCCCCACAACATCCACACACAT
JMFS016A04+ AACCCCAAGAACATCCACTCCTCAGATCTCATGTTTCACCCCCACAACATCCACACACAT
JMFS051C12+ AACCCCAAGAACATCCACTCCTCAGATNTCATCTTTCACCCCCACAACATCCACACACAT
JMFS148C03+ AACCCCAAGAACATCCACTCCTCAGATCTCATCTTTCACCCCCACAACATCCACACACAT
                      ____________________________________________________________
consensus AACCCCAAGAACATCCACTCCTCAGATCTCATCTTTCACCCCCACAACATCCACACACAT
 
. : . : . : . : . : . :
JMFS019C03+ ATATAAATGCATACACATATTTCATACTTCTCCCCCTCGCATTGCTCTCTCAAAACGACA
JMFS073G09+ ATATAAATGCATACACATATTTCATACTTCTCCCCCTCGCATTGCTCTCTCAAAACGACA
JMFS016A04+ ATATAAATGCATACACATATTTCATACTTCTCCCCCTCGCATTGCTCTCTCAAAACGACA
JMFS051C12+ ATATAAATGCATACACATATTTCATACTTCTCCCCCTCGCANNGCTCTCTCAAAACGACA
JMFS148C03+ ATATAAATGCATACACATATTTCATACTTCTCCCCCTCGCATTGCTCTCTCAAAACGACA
                      ____________________________________________________________
consensus ATATAAATGCATACACATATTTCATACTTCTCCCCCTCGCATTGCTCTCTCAAAACGACA
 
. : . : . : . : . : . :
JMFS019C03+ AGAGAAACCGCCGTTTTCCCCCAGCACCACCGCCGCCA----CCGGAGGAGAATCTTCAA
JMFS073G09+ AGAGAAACCGCCGTTTTCCCCCAGCACCACCGCCGCCA----CCGGAGGAGAATCTTCAA
JMFS016A04+ AGAGAAACCGCCGTTTTCCCCCAGCACCACCGCCGCCA----CCGGAGGAGAATCTTCAA
JMFS051C12+ AGAGAAACCGCCGTTTTCTTTCTCATGCACCTCTTCTTTTTTCCGGAGGAGAATNTTCAA
JMFS148C03+ AGAGAAACCGCCGTTTTCCCCCAGCACCACCGCCGCCA----CCGGAGGAGAATCTTCAA
                      ____________________________________________________________
consensus AGAGAAACCGCCGTTTTCCCCCAGCACCACCGCCGCCA----CCGGAGGAGAATCTTCAA
 
. : . : . : . : . : . :
JMFS019C03+ AGATCCAGCCGTACACAAACCGG
JMFS073G09+ AGATCCAGCCGTACACAAACCGGGTACCACATTAGCACCCAGTTTCTGCACTCCAAAGCG
JMFS016A04+ AGATCCAGCCGTACACAAACCGGGTACCACATTAGCACCCAGTTTCTGCACTCCAAAGCG
JMFS051C12+ AGATCCAGCCGTACACAAACCGGGNACCACATTAGCACCCAGTTTTTGCACTCCAAAGCG
JMFS148C03+ AGATCCAGCCGTACACAAACCGGGTACCACATTAGCACCCAGTTTCTGCACTCCAAAGCG
                      ____________________________________________________________
consensus AGATCCAGCCGTACACAAACCGGGTACCACATTAGCACCCAGTTTCTGCACTCCAAAGCG
 
. : . : . : . : . : . :
JMFS073G09+ TGGCGAGCTTAGCAGAGCAGGCCAAAAATGGGGGGGTTTTATTCACTCCCTACCCATCAA
JMFS016A04+ TGGCGAGCTTAGCAGAGCAGGCCAAAAATGGGGGGGTTTTATTCACTCCCTACCCATCAA
JMFS051C12+ TGGCTAGCTTAGCAGAGCAGGCCAAAAATGGGGGGGTTAAATTCACTCCCTACCCATCAA
JMFS148C03+ TGGCGAGCTTAGCAGAGCAGGCCAAAAATGGGGGGGTTTTATTCACTCCCTACCCATCAA
                      ____________________________________________________________
consensus TGGCGAGCTTAGCAGAGCAGGCCAAAAATGGGGGGGTTTTATTCACTCCCTACCCATCAA
 
. : . : . : . : . : . :
JMFS073G09+ AGCTGCAGTTCCCATACACCCAACCATAAATACACATAAATATTATATTTAGTACACATG
JMFS016A04+ AGCTGCAGTTCCCATACACCCAACCATAAATACACATAAATATTATATTTAGTACACATG
JMFS051C12+ AGCNGCAGTTCCCANACACCCAACCATAAATACACATAAATANTANATTTAGTACACATG
JMFS148C03+ AGCTGCAGTTCCCATACACCCAACCATAAATACACATAAATATTATATTTAGTACACATG
                      ____________________________________________________________
consensus AGCTGCAGTTCCCATACACCCAACCATAAATACACATAAATATTATATTTAGTACACATG
 
. : . : . : . : . : . :
JMFS073G09+ AATACTAGATTCAATGTTT
JMFS016A04+ AATACTAGATTCAATGTTATGTTTATGTCATTCTCCAAGATTTTACCTAAGCTCTTA
JMFS051C12+ AANANNAGATTCAATGTTT
JMFS148C03+ AATACTAGATTCAATGTTTTGTTTATGTCATTCTCCAAGATTTTACCTAAGCTCTTATGT
                      ____________________________________________________________
consensus AATACTAGATTCAATGTTTTGTTTATGTCATTCTCCAAGATTTTACCTAAGCTCTTATGT