Contig 004863:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020C14Sequence570004863 (2)ref|NP_001275319.1|1e-90P-glycoprotein [Solanum tuberosum] gb|AAD10836.1| P-glycoprotein [Solanum tubero786014844ref|XP_003625677.1|9e-102ABC transporter-like protein, partial [Medicago truncatula]
JMFS128F09Sequence624004863 (2)ref|XP_004246624.1|5e-81PREDICTED: ABC transporter B family member 1 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF020C14+                                                           AAACCCAGACAC
                      ____________________________________________________________
consensus                                                             AAACCCAGACAC
 
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JMFF020C14+           AAATGTTGCCATATAGTGAATGAAATTCCCCAACTTCTCACTAATGGCATCTTGGACCAG
JMFS128F09+                                                                GGACCAG
                      ____________________________________________________________
consensus             AAATGTTGCCATATAGTGAATGAAATTCCCCAACTTCTCACTAATGGCATCTTGGACCAG
 
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JMFF020C14+           CACTGCTTCAGTGTTGATGGCAAAAACAACATCTGAAGTGCGCACCTCAGTATCAAAATA
JMFS128F09+           CACTGCTTCAGTGTTGATGGCAAAAACAACATCTGAAGTGCGCACCTCAGTATCAAAATA
                      ____________________________________________________________
consensus             CACTGCTTCAGTGTTGATGGCAAAAACAACATCTGAAGTGCGCACCTCAGTATCAAAATA
 
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JMFF020C14+           TTGAATGTCTTGGTTGAGAGCAGCCTCCAAGTACTTTATCCTCATTTTGGTTGACTGTCT
JMFS128F09+           TTGAATGTCTTGGTTGAGAGCAGCCTCCAAGTACTTTATCCTCATTTTGGTTGACTGTCT
                      ____________________________________________________________
consensus             TTGAATGTCTTGGTTGAGAGCAGCCTCCAAGTACTTTATCCTCATTTTGGTTGACTGTCT
 
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JMFF020C14+           CTCCCCAGTCCACATCCAGCAAGAAATCTCTGCCCATGAAGATGCCCATATTGCAGCTCC
JMFS128F09+           CTCCCCAGTCCACATCCAGCAAGAAATCTCTGCCCATGAAGATGCCCATATTGCAGCTCC
                      ____________________________________________________________
consensus             CTCCCCAGTCCACATCCAGCAAGAAATCTCTGCCCATGAAGATGCCCATATTGCAGCTCC
 
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JMFF020C14+           CACTACAAGGAAGTAATACGCATACTTCAAAACTTCCTGAGTCATTTTATCAACATCGTT
JMFS128F09+           CACTACAAGGAAGTAATACGCATACTTCAAAACTTCCTGAGTCATTTTATCAACATCGTT
                      ____________________________________________________________
consensus             CACTACAAGGAAGTAATACGCATACTTCAAAACTTCCTGAGTCATTTTATCAACATCGTT
 
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JMFF020C14+           AGCATAAGAGCCAAAAGAATTAACAAGATCTGCGAAGAATCTAAGGAAGAGTGGCAAAGA
JMFS128F09+           AGCATAAGAGCCAAAAGAATTAACAAGATCTGCGAAGAATCTAAGGAAGAGTGGCAAAGA
                      ____________________________________________________________
consensus             AGCATAAGAGCCAAAAGAATTAACAAGATCTGCGAAGAATCTAAGGAAGAGTGGCAAAGA
 
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JMFF020C14+           AAAACCATGAACGAAGGCACCCAGACTTCCAATTCCCATTAGAACATAGTCCAAACCATC
JMFS128F09+           AAAACCATGAACGAAGGCACCCAGACTTCCAATTCCCATTAGAACATAGTCCAAACCATC
                      ____________________________________________________________
consensus             AAAACCATGAACGAAGGCACCCAGACTTCCAATTCCCATTAGAACATAGTCCAAACCATC
 
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JMFF020C14+           TGCGAATCTGAAGAGGTCCCCAAAGGCAACAGTGGGAGGAGGAGAGCTAGGCTTCTCTCT
JMFS128F09+           TGCGAATCTGAAGAGGTCCCCAAAGGCAACAGTGGGAGGAGGAGAGCTAGGCTTCTCTCT
                      ____________________________________________________________
consensus             TGCGAATCTGAAGAGGTCCCCAAAGGCAACAGTGGGAGGAGGAGAGCTAGGCTTCTCTCT
 
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JMFF020C14+           CTCAGAACCCTCCATTATTATTTCTACTCTCTTCTCTTGGGGTTCTTGAGGTGTTAGTGT
JMFS128F09+           CTCAGAACCCTCCATTATTATTTCTACTCTCTTCTCTTGGGGTTCTTGAGGTGTTAGTGT
                      ____________________________________________________________
consensus             CTCAGAACCCTCCATTATTATTTCTACTCTCTTCTCTTGGGGTTCTTGAGGTGTTAGTGT
 
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JMFF020C14+           AGTAGTAGTAGTTAGTGT                                          
JMFS128F09+           AGTAGTAGTAGTTAGTGTGGTTGTAGGGATAGAGGGATTGTGGGATTTAAAAGAGGAATC
                      ____________________________________________________________
consensus             AGTAGTAGTAGTTAGTGTGGTTGTAGGGATAGAGGGATTGTGGGATTTAAAAGAGGAATC
 
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JMFS128F09+           TTGTAATGGAAGTGGTGACGCAACAAGCAGCTCGGAGCCTTGCATGTCAAACCATTTCCA
                      ____________________________________________________________
consensus             TTGTAATGGAAGTGGTGACGCAACAAGCAGCTCGGAGCCTTGCATGTCAAACCATTTCCA