Contig 004853:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004K20Sequence481004853 (10)ref|XP_008394069.1|2e-60PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming]-like [Malus d712011074 (3)gb|AAO25536.1|1e-65cellulose synthase [Populus tremuloides]
JMFF014M01Sequence528004853 (10)gb|EYU32338.1|2e-57hypothetical protein MIMGU_mgv1a000544mg [Erythranthe guttata]687020172gb|AAO25536.1|3e-73cellulose synthase [Populus tremuloides]
JMFF025G15Sequence579004853 (10)ref|XP_008219478.1|9e-66PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Prunus mume]714011074 (3)gb|AAO25536.1|1e-65cellulose synthase [Populus tremuloides]
JMFS024C10Sequence604004853 (10)emb|CBI21020.3|9e-105unnamed protein product [Vitis vinifera]
JMFS042D06Sequence628004853 (10)emb|CBI21020.3|3e-105unnamed protein product [Vitis vinifera]
JMFS092B06Sequence603004853 (10)ref|XP_008219478.1|2e-83PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Prunus mume]
JMFS101F05Sequence595004853 (10)gb|AGV22109.1|4e-114cellulose synthase 7 [Betula luminifera]
JMFS111B10Sequence625004853 (10)ref|XP_008219478.1|2e-79PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Prunus mume]
JMFS125E05Sequence526004853 (10)gb|EYU32338.1|4e-57hypothetical protein MIMGU_mgv1a000544mg [Erythranthe guttata]
JMFS159B02Sequence300004853 (10)ref|XP_006361724.1|3e-46PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Solanum tube

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS101F05+ GACAGCA
                      ____________________________________________________________
consensus GACAGCA
 
. : . : . : . : . : . :
JMFS101F05+ CTGTGTTTGCTGTGACAAGAGGAGGCTCTTTCAAAGGATCCACAGTACTGACAAAAACAT
                      ____________________________________________________________
consensus CTGTGTTTGCTGTGACAAGAGGAGGCTCTTTCAAAGGATCCACAGTACTGACAAAAACAT
 
. : . : . : . : . : . :
JMFS101F05+ CCACTGGTGCTAACTGAGAAGGCTCCCCCTCCCTATCATATCTTAATGCAAGCCTGTCCA
JMFS024C10+ AGCCTGTCTA
                      ____________________________________________________________
consensus CCACTGGTGCTAACTGAGAAGGCTCCCCCTCCCTATCATATCTTAATGCAAGCCTGTCTA
 
. : . : . : . : . : . :
JMFS101F05+ GATAGGTCTCACGGTTGATGGGTGACCATTTTGGGAACTGATCCAAAAGCCAAGATAAGG
JMFS024C10+ GATAGGTCTCACGATTGATGGGTGACCATTTTGGGAACTGATCCAAAAGCCAAGATAAGG
                      ____________________________________________________________
consensus GATAGGTCTCACGGTTGATGGGTGACCATTTTGGGAACTGATCCAAAAGCCAAGATAAGG
 
. : . : . : . : . : . :
JMFS101F05+ CAAACCAAACTTCACAGATAACCGATACCAACCACAAAGGATAGGCATCATTCACAGGGT
JMFS024C10+ CGAACCAAACCTCACAGATAACTGATACCAGCCACAAAGGATAGGCATCATTCACAGGGT
                      ____________________________________________________________
consensus CGAACCAAACTTCACAGATAACTGATACCAGCCACAAAGGATAGGCATCATTCACAGGGT
 
. : . : . : . : . : . :
JMFS101F05+ GAGTCAGCCGGTATTGCATGAAAAAGCCCAAGATGATCAACCGAAGTATAATTACAACCC
JMFS024C10+ GAGTCAGCCGGTATTGCAAGAAAAAACCCAAGATGATCAACCGAAGTATAATTACAACCC
                      ____________________________________________________________
consensus GAGTCAGCCGGTATTGCATGAAAAAGCCCAAGATGATCAACCGAAGTATAATTACAACCC
 
. : . : . : . : . : . :
JMFS101F05+ GATAAGGGGTAAGGTGAGAAGAAGAGATAGGAATCACACGACTTAAAGGTTGGCGAGCAT
JMFS024C10+ GGTAAGGGGTAACGTGAGAAGAAGGGATAGGAATCACACGACTTAAAGGTTGGCGATCAT
                      ____________________________________________________________
consensus GGTAAGGGGTAAGGTGAGAAGAAGGGATAGGAATCACACGACTTAAAGGTTGGCGATCAT
 
. : . : . : . : . : . :
JMFS101F05+ CATCAGCCATTTGTAGCTCTTCTCCATTTGATCCTGTCCCCTCAATGTCTCCTTTCCCTT
JMFS024C10+ CATCAGCCATTTGTAGCTCGTCTCCATTTGACCCTGTCCCTTCAATGTCTCCTTTCCCTT
                      ____________________________________________________________
consensus CATCAGCCATTTGTAGCTCTTCTCCATTTGATCCTGTCCCTTCAATGTCTCCTTTCCCTT
 
. : . : . : . : . : . :
JMFS101F05+ CCGAGTATCTGTTGGTTATTTGAGTCATACTTTTCTCCTGTTTAAGTTTCCAACCTTCTA
JMFS024C10+ CCATGTATCTGTTGGTTATTTGAGTCATATTTTTGTCCTGTTTAAGTTTCCAACCTTCAA
JMFS042D06+ TTAAGTTTCCAACCTTCAA
                      ____________________________________________________________
consensus CCGTGTATCTGTTGGTTATTTGAGTCATATTTTTGTCCTGTTTAAGTTTCCAACCTTCAA
 
. : . : . : . : . : . :
JMFS101F05+ CTCTCTCTTTCCAGTCAACACTACCAAGCCCGTAAGAATTCAAGTCCTTTGAAGGGTCCA
JMFS024C10+ CTCTCTCTTTCCAGTCAACGCTACCAAGTCCATAAGAATTCAAGTCCTTTGAAGGGTCCA
JMFS042D06+ CTCTCTCTTTCCAGTCAACGCTACCAAGTCCATAAGAATTCAAGTCCTTTGAAGGGTCCA
                      ____________________________________________________________
consensus CTCTCTCTTTCCAGTCAACGCTACCAAGTCCATAAGAATTCAAGTCCTTTGAAGGGTCCA
 
. : . : . : . : . : . :
JMFS101F05+ CAATTCTCACAGGAACTGGTTGCCTCGGGTCAAGGTATGGTAGGGAGT
JMFS024C10+ CAATTCTGACGGGAACTGGCTGCCTTGGATCAAGGTACGGTAAGGAGTGACCATGCTTAT
JMFS042D06+ CAATTCTGACGGGAACTGGCTGCCTTGGATCAAGGTACGGTAAGGAGTGACCATGCTTAT
                      ____________________________________________________________
consensus CAATTCTGACGGGAACTGGCTGCCTTGGATCAAGGTACGGTAAGGAGTGACCATGCTTAT
 
. : . : . : . : . : . :
JMFS024C10+ CTCCAGGACCCAAAGGTCCCGACATACTTCTTACAGATTGAGTATCCGGTGTTGCACTTA
JMFS042D06+ CTCCAGGACCCAAAGGTCCCGACATACTTCTTACAGATTGAGTATCCGGTGTTGCACTTA
JMFS092B06+ ACATACTTCTTACAGATTGAGTATCCGGTGTTGCACTTA
JMFS111B10+ GATTGAGTATCCGGTGTGGCACTTA
                      ____________________________________________________________
consensus CTCCAGGACCCAAAGGTCCCGACATACTTCTTACAGATTGAGTATCCGGTGTTGCACTTA
 
. : . : . : . : . : . :
JMFS024C10+ GAGGGATTTCACCAGAGATTGGCTGCCCATT
JMFS042D06+ GAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGAGGGATTGGTTGATGTCTAG
JMFS092B06+ GAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGAGGGATTGGTTGATGTCTAG
JMFF025G15+ CTAG
JMFS111B10+ GAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGAGGGATTGGTTGATGTCTAG
                      ____________________________________________________________
consensus GAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGAGGGATTGGTTGATGTCTAG
 
. : . : . : . : . : . :
JMFS042D06+ AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
JMFS092B06+ AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
JMFF004K20+ TCCTT
JMFF025G15+ AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
JMFS159B02+ AGCCTTGACATTTCCTT
JMFS111B10+ AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
                      ____________________________________________________________
consensus AGGATGAGGAGAGATCAGCATCTTCTCCCTGCCACTTGTGTATGCCCTTGCCATTTCCTT
 
. : . : . : . : . : . :
JMFS042D06+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFS092B06+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFF004K20+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFF025G15+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFF014M01+ TTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
JMFS125E05+ AACATCCTCCTCCTCATCATCACCGTCAA
JMFS159B02+ CGCCATAATTGAACTCATTGACAAGGTCGTCAACATCCTCCTCCTCATCATCACCGTCAA
JMFS111B10+ CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
                      ____________________________________________________________
consensus CACCATAATTGAACTCATTGTTGAGGTCATCAACATCATCCTCATCATCATCACCATCAA
 
. : . : . : . : . : . :
JMFS042D06+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFS092B06+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFF004K20+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFF025G15+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFF014M01+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
JMFS125E05+ CTCGTGGGCTCCCTTTAAGCCTCTTGTATCGGGTCTTGCACTGGGGGCATGCTTGGTTCC
JMFS159B02+ CTCGTGGGCTCCCTTTAAGCCTCTTGTATCGGGTCTTGCACTGGGGGCATGCTTGGTTCC
JMFS111B10+ CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
                      ____________________________________________________________
consensus CTTGTGGGCTCCCTTTATGCCTCTTGTATCTGGTCTTGCACTGGGGGCACACTTGATTCC
 
. : . : . : . : . : . :
JMFS042D06+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFS092B06+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFF004K20+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFF025G15+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFF014M01+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
JMFS125E05+ CATCTTTGCGTTCATACTCATAACAAGTCCGACAAACAGGAAAGGCACACTCATTACAAG
JMFS159B02+ CATCTTTGCGTTCATACTCATAACAAGTCCGACAAACAGGAAAGGCACACTCATTACAAG
JMFS111B10+ CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
                      ____________________________________________________________
consensus CATCTTTGCGCTCATACTCATAACAAGACCGACAAACAGGAAAGGCGCACTCATTACAAG
 
. : . : . : . : . : . :
JMFS042D06+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFS092B06+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFF004K20+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFF025G15+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFF014M01+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
JMFS125E05+ CAACAAATATATCACCATTAGCAGTCACCCCAACAGTATCACCGCAAATCTGACATATCT
JMFS159B02+ CAACAAATATATCACCATTAGCAGTCACCCCAACAGTATCACCGCAAATCTGACATATCT
JMFS111B10+ CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
                      ____________________________________________________________
consensus CAACAAATATATCACCATTAGCAGTAACCCCAAGAGTATCACCACAAATCTGACATATCT
 
. : . : . : . : . : . :
JMFS042D06+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFS092B06+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFF004K20+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFF025G15+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFF014M01+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
JMFS125E05+ GACTATCCAGATTCTTCAGGGGCTTCGGCGCACTATCAGAATCATGGCGGATCCGAACCA
JMFS159B02+ GACTATCCAGATTCCTCAGGGGCTTCGGCGCACTATCAGAATC
JMFS111B10+ GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
                      ____________________________________________________________
consensus GACTATCCAAATTCTTCAAAGGCTTTGGCGCACTATCAGAATCATGGCGGATTCGAACCA
 
. : . : . : . : . : . :
JMFS042D06+ GC
JMFS092B06+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
JMFF004K20+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
JMFF025G15+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
JMFF014M01+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
JMFS125E05+ GCTCATTCCGCTTGTGCGACCCAGCAACCATCCCAGCACTTGCCTCCATTTCTTC
JMFS111B10+ GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
                      ____________________________________________________________
consensus GCTCATTCCGCTTGTGCGATCCAGCAACCAACCCAGCACTTGCCTCCATTTCTTCTTCAA
 
. : . : . : . : . : . :
JMFS092B06+ GAAACAGAGGATTTCTACAGTATTATTACAACAATTTCTGATAACTACTGCAATGTGGAA
JMFF004K20+ GAAACAGAGGATTTCTACAGTATTATTACAACAATTTCTGATAACTACTGCAATGTGGAA
JMFF025G15+ GAAACAGAGGATTTCTACAGTATTATT
JMFF014M01+ GAAACAGAGGA
JMFS111B10+ GAAACAGAGGATTTCTACAGTATTATTACAACAATTTCTGATAACTACTGCAATGTGGAA
                      ____________________________________________________________
consensus GAAACAGAGGATTTCTACAGTATTATTACAACAATTTCTGATAACTACTGCAATGTGGAA
 
. : . : . : . : . : . :
JMFS092B06+ GCAAATTCGTGGG
JMFF004K20+ GCAAATTCGTGGGAAAAAAATATTTTTTTATTGGGGTTTAATAATAAATAAAAGAT
JMFS111B10+ GCAAATTCGTGGGAAAAAAATATTTTTTTATTGGGGTTTAATAATAAATAAAAGATAAAA
                      ____________________________________________________________
consensus GCAAATTCGTGGGAAAAAAATATTTTTTTATTGGGGTTTAATAATAAATAAAAGATAAAA