Contig 004851:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047L13Sequence648004851 (4)ref|XP_011082787.1|2e-43PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440607011200 (2)ref|XP_006370097.1|4e-32hypothetical protein POPTR_0001s394901g, partial [Populus trichocarpa] gb|ERP666
JMFS075F07Sequence359004851 (4)ref|XP_010065089.1|6e-08PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430
JMFS110B08Sequence627004851 (4)ref|XP_011082787.1|4e-13PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440
JMSF017C24Sequence220004851 (4)755011200 (2)gb|EYU29542.1|4e-67hypothetical protein MIMGU_mgv1a0269212mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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JMFF047L13+ TAG
                      ____________________________________________________________
consensus TAG
 
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JMFF047L13+ AAATATCGCCTATTTCTTTGGGTATTGTCCCATGNATGCGATTTCCCAAAAGTGACAACT
                      ____________________________________________________________
consensus AAATATCGCCTATTTCTTTGGGTATTGTCCCATGNATGCGATTTCCCAAAAGTGACAACT
 
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JMFF047L13+ TAGTGAGACGGAGTTGGCCAAAGCTACGAGAAATTGATCCACTAATGTAATTGCGAGTCA
                      ____________________________________________________________
consensus TAGTGAGACGGAGTTGGCCAAAGCTACGAGAAATTGATCCACTAATGTAATTGCGAGTCA
 
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JMFF047L13+ GATCCAATACTTGCAGAAATTTAAGTTTTGCAAAGTCTTCTGCAGGAGGAAGAACTCCAG
                      ____________________________________________________________
consensus GATCCAATACTTGCAGAAATTTAAGTTTTGCAAAGTCTTCTGCAGGAGGAAGAACTCCAG
 
. : . : . : . : . : . :
JMFF047L13+ GGAGATTAAGACCTTTCAACAGGATCTGTGTCACATGGCAAATTGTACTACCATTGAAAG
JMFS110B08+ CATGGCAAATTGTACTACCATTGAAAG
                      ____________________________________________________________
consensus GGAGATTAAGACCTTTCAACAGGATCTGTGTCACATGGCAAATTGTACTACCATTGAAAG
 
. : . : . : . : . : . :
JMFF047L13+ TGCAATTACAAAATACATGGCTGAATGTATCGTTGCCGGATCCATTTTGATCATCATCAG
JMFS075F07+ TGATCATCATCAG
JMFS110B08+ TGCAATTACAAAATACATGGCTGAATGTATCGTTGCCGGATCCATTTTGATCATCATCAG
                      ____________________________________________________________
consensus TGCAATTACAAAATACATGGCTGAATGTATCGTTGCCGGATCCATTTTGATCATCATCAG
 
. : . : . : . : . : . :
JMFF047L13+ AAATGGTCTCGTTCAGACCTACACCATTATTGCAAGATGTCGGGGTAACATTCCAATACT
JMFS075F07+ AAATGGTCTCGTTCAGACCTACACCATTATTGCAAGATGTCGGGGTAACATTCCAATACT
JMFS110B08+ AAATGGTCTCGTTCAGACCTACACCATTATTGCAAGATGTCGGGGTAACATTCCAATACT
                      ____________________________________________________________
consensus AAATGGTCTCGTTCAGACCTACACCATTATTGCAAGATGTCGGGGTAACATTCCAATACT
 
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JMFF047L13+ TGTTCCTTAGCTTTGCAGATATTGTGTTCAAAGCTTCCACTTCCTCCGCAGGCAAGATTG
JMFS075F07+ TGTTCCTTAGCTTTGCAGATATTGTGTTCAAAGCTTCCACTTCCTCCGCAGGCAAGATTG
JMFS110B08+ TGTTCCTTAGCTTTGCAGATATTGTGTTCAAAGCTTCCACTTCCTCCGCAGGCAAGATTG
                      ____________________________________________________________
consensus TGTTCCTTAGCTTTGCAGATATTGTGTTCAAAGCTTCCACTTCCTCCGCAGGCAAGATTG
 
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JMFF047L13+ AAGCGGCGGATGTGAGGCAAGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
JMFS075F07+ AAGCGGCGGATGTGAGGCAAGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
JMSF017C24+ AGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
JMFS110B08+ AAGCGGCGGATGTGAGGCAAGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
                      ____________________________________________________________
consensus AAGCGGCGGATGTGAGGCAAGCGAAGAAACTCATCAACGCCAGAATGAATGCGTATAGAA
 
. : . : . : . : . : . :
JMFF047L13+ ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
JMFS075F07+ ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
JMSF017C24+ ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
JMFS110B08+ ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
                      ____________________________________________________________
consensus ACAGAGCAACAGGATTCTCTCTAGAATTCATTCTTCTTCAATTTGATCTTCCTCAGAAGA
 
. : . : . : . : . : . :
JMFF047L13+ CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
JMFS075F07+ CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
JMSF017C24+ CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
JMFS110B08+ CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
                      ____________________________________________________________
consensus CTCCAGAACTGCAAGTTAGTTACAGTTGAAGAAAATTTGCAGAAAAATTAGAATGAGGAG
 
. : . : . : . : . : . :
JMFF047L13+ TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAA
JMFS075F07+ TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAA
JMSF017C24+ TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAATGCTCTCCAGTCTCC
JMFS110B08+ TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAATGCTCTCCAGTCTCCAC
                      ____________________________________________________________
consensus TGTGGGAGGGATTTGAGGGCTGCGTTTGGGAAGAAGGGAGAAATGCTCTCCAGTCTCCAC
 
. : . : . : . : . : . :
JMFS110B08+ GGACGGAAGTAAATGGTTAGACAATCAAAATTTAAAATAATATATCATCACTGTAATAAA
                      ____________________________________________________________
consensus GGACGGAAGTAAATGGTTAGACAATCAAAATTTAAAATAATATATCATCACTGTAATAAA
 
. : . : . : . : . : . :
JMFS110B08+ AGTCAGACTACCTAGTCGGCTAATCCTAATTCCTAATTTTGTCTACGTCGAAAAATCGAA
                      ____________________________________________________________
consensus AGTCAGACTACCTAGTCGGCTAATCCTAATTCCTAATTTTGTCTACGTCGAAAAATCGAA
 
. : . : . : . : . : . :
JMFS110B08+ ATAATTATGCCGGAAAGTGTTACAAGGAATTTCTACACGGTTTTAAAATTCCACACACTA
                      ____________________________________________________________
consensus ATAATTATGCCGGAAAGTGTTACAAGGAATTTCTACACGGTTTTAAAATTCCACACACTA