Contig 004848:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS100E04+                                            TTCGATTTTTCCCACCGGCAAAGAACC
JMFS106D11+                                CATTACCAAAGTTTCGATTTTTCCCACCGGCAAAGAACC
                      ____________________________________________________________
consensus                                  CATTACCAAAGTTTCGATTTTTCCCACCGGCAAAGAACC
 
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JMFS100E04+           GCGCGGTCACGTTTCCTGACAGCTCCGCCAGAATCATTGCTGCAGCGCCGCAATACCTAA
JMFS106D11+           GCGCGGTCACGTTTCCTGACAGCTCCGCCAGAATCATTGCTGCAGCGCCGCAATACCTAA
                      ____________________________________________________________
consensus             GCGCGGTCACGTTTCCTGACAGCTCCGCCAGAATCATTGCTGCAGCGCCGCAATACCTAA
 
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JMFS100E04+           GAGCTTGGAATCTGAGGAGAAAGATTACAGCTTGAAGGAAGGATTTAGCTAAGAGAAGCC
JMFS106D11+           GAGCTTGGAATCTGAGGAGAAAGATTACAGCTTGAAGGAAGGATTTAGCTAAGAGAAGCC
                      ____________________________________________________________
consensus             GAGCTTGGAATCTGAGGAGAAAGATTACAGCTTGAAGGAAGGATTTAGCTAAGAGAAGCC
 
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JMFS100E04+           TTTGCTGAGATTGGGTCATCAAGGTGAGGGAGAAAATGGGGTGGCGTTGCTTCTGGCGAA
JMFS106D11+           TTTGCTGAGATTGGGTCATCAAGGTGAGGGAGAAAATGGGGTGGCGTTGCTTCTGGCGAA
                      ____________________________________________________________
consensus             TTTGCTGAGATTGGGTCATCAAGGTGAGGGAGAAAATGGGGTGGCGTTGCTTCTGGCGAA
 
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JMFS100E04+           AAGGGTCTCTAGAGGAGGAAGAAGAGAGGGAGGTGAAGAGAGAGAAGGATAGAGTGAGGA
JMFS106D11+           AAGGGTCTCTAGAGGAGGAAGAAGAGAGGGAGGTGAAGAGAGAGAAGGATAGAGTGAGGA
                      ____________________________________________________________
consensus             AAGGGTCTCTAGAGGAGGAAGAAGAGAGGGAGGTGAAGAGAGAGAAGGATAGAGTGAGGA
 
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JMFS100E04+           GGAAAGAGAAGAGGGAGACGAGGAAAGAGAAGGGGAAGATAGAGAAAGAGGACGGGGAGG
JMFS106D11+           GGAAAGAGAAGAGGGAGACGAGGAAAGAGAAGGGGAAGATAGAGAAAGAGGACGGGGAGG
                      ____________________________________________________________
consensus             GGAAAGAGAAGAGGGAGACGAGGAAAGAGAAGGGGAAGATAGAGAAAGAGGACGGGGAGG
 
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JMFS100E04+           AGCGGAGGAAAGGGAGGAGAGAGTAGAGAGAGCGGAGGGAGAAGAGGAGGAGGAAGAGGA
JMFS106D11+           AGCGGAGGAAAGGGAGGAGAGAGTAGAGAGAGCGGAGGGAGAAGAGGAGGAGGAAGAGGA
                      ____________________________________________________________
consensus             AGCGGAGGAAAGGGAGGAGAGAGTAGAGAGAGCGGAGGGAGAAGAGGAGGAGGAAGAGGA
 
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JMFS100E04+           AGGAGATAGAAGAAGTCTTGGCGGTGGCGCTGTAAGAAGATTTGAGGGGAAAAGCAGAGT
JMFS106D11+           AGGAGATAGAAGAAGTCTTGGCGGTGGCGCTGTAAGAAGATTTGAGGGGAAAAGCAGAGT
                      ____________________________________________________________
consensus             AGGAGATAGAAGAAGTCTTGGCGGTGGCGCTGTAAGAAGATTTGAGGGGAAAAGCAGAGT
 
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JMFS100E04+           TTTTTGAGGGGGTGGGGGTGGGTGTCAAAGGAGGATAGAGGTGCCTTGAAGGAGTGGGTG
JMFS106D11+           TTTTTGAGGGGGTGGGGGTGGGTGTCAAAGGAGGATAGAGGTGCCTTGAAGGAGTGGGTG
                      ____________________________________________________________
consensus             TTTTTGAGGGGGTGGGGGTGGGTGTCAAAGGAGGATAGAGGTGCCTTGAAGGAGTGGGTG
 
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JMFS100E04+           TGGTGGTGGGAACGGCGGTGCGCGGTGGCAGAGATAAGCGGTGTGGGCGGTGGTGGTGGT
JMFS106D11+           TGGTGGTGGGAACGGCGGTGCGCGGTGGCAGAGATAAGCGGTGTGGGCGGTGGTGGTGGT
                      ____________________________________________________________
consensus             TGGTGGTGGGAACGGCGGTGCGCGGTGGCAGAGATAAGCGGTGTGGGCGGTGGTGGTGGT
 
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JMFS100E04+           GGTGGCGGCGATGATCATGATCGGCCATGGTCGTAGGTGAAACGGCGGTTTA        
JMFS106D11+           GGTGGCGGCGATGATCATGATCGGCCATGGTCGTAGGTGAAACGGCGGTTTAGATTTCCG
                      ____________________________________________________________
consensus             GGTGGCGGCGATGATCATGATCGGCCATGGTCGTAGGTGAAACGGCGGTTTAGATTTCCG