Contig 004847:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS105E12+                                                     GTTCTTGACAGGTCACTG
                      ____________________________________________________________
consensus                                                       GTTCTTGACAGGTCACTG
 
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JMFS125D10+                                                   ATCCTCACCAAGTGAATATT
JMFS125C10+                                                   ATCCTCACCAAGTGAATATT
JMFS105E12+           GCAAGCTCCTGTAGCCTATAAAAGCTTCCTTACGCTTTTGATCCTCACCAAGTGAATATT
                      ____________________________________________________________
consensus             GCAAGCTCCTGTAGCCTATAAAAGCTTCCTTACGCTTTTGATCCTCACCAAGTGAATATT
 
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JMFS125D10+           GGTATTTAAGGTACGCTAGCATCACTTGAGGGGGGCCATGATACCGCATTGTTTCAGGAG
JMFS125C10+           GGTATTTAAGGTACGCTAGCATCACTTGAGGGGGGCCATGATACCGCATTGTTTCAGGAG
JMFS105E12+           GGTATTTAAGGTACGCTAGCATCACTTGAGGGGGGCCATGATACCGCATTGTTTCAGGAG
                      ____________________________________________________________
consensus             GGTATTTAAGGTACGCTAGCATCACTTGAGGGGGGCCATGATACCGCATTGTTTCAGGAG
 
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JMFS125D10+           ATGTTTCAGGATCAAACTGCAAGAGTTTAACTAATGTAGATCTAGCCTGACTAATTCTGC
JMFS125C10+           ATGTTTCAGGATCAAACTGCAAGAGTTTAACTAATGTAGATCTAGCCTGAGTAATTCTGC
JMFS105E12+           ATGTTTCAGGATCAAACTGCAAGAGTTTAACTAATGTAGATCTAGCCTGACTAATTCTGC
                      ____________________________________________________________
consensus             ATGTTTCAGGATCAAACTGCAAGAGTTTAACTAATGTAGATCTAGCCTGACTAATTCTGC
 
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JMFS125D10+           CGCTCTTACGGCAAAGATTGGCAAACTTAATCCATGTTTCAGAATCTTCTGTTGGAGGTA
JMFS125C10+           CGCTCTTACGGCAAAGATTGGCAAACTTAATCCATGTTTCAGAATCTTCTGTTGGAGGTA
JMFS105E12+           CGCTCTTACGGCAAAGATTGGCAAACTTAATCCATGTTTCAGAATCTTCTGTTGGAGGTA
                      ____________________________________________________________
consensus             CGCTCTTACGGCAAAGATTGGCAAACTTAATCCATGTTTCAGAATCTTCTGTTGGAGGTA
 
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JMFS125D10+           AAACAAGTGCCCTGACAGCTAAAAGTCCTTGCCAAACCTCAACATTTCTTTTTGTGCCTT
JMFS125C10+           AAACAAGTGCCCTGACAGCTAAAAGTCCTTGCCAAACCTCAACATTTCTTTTTGTGCCTT
JMFS105E12+           AAACAAGTGCCCTGACAGCTAAAAGTCCTTGCCAAACCTCAACATTTCTTTTTGTGCCTT
                      ____________________________________________________________
consensus             AAACAAGTGCCCTGACAGCTAAAAGTCCTTGCCAAACCTCAACATTTCTTTTTGTGCCTT
 
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JMFS125D10+           TTATGCGCTCATTCCACATATTGCGAATAAGGGCCCTCTTTCCCTCGGAAACAGGATTTC
JMFS125C10+           TTATGCGCTCATTCCACATATTGCGAATAAGGGCCCTCTTTCCCTCGGAAACAGGATTTC
JMFS105E12+           TTATGCGCTCATTCCACATATTGCGAATAAGGGCCCTCTTTCCCTCGGAAACAGGATTTC
                      ____________________________________________________________
consensus             TTATGCGCTCATTCCACATATTGCGAATAAGGGCCCTCTTTCCCTCGGAAACAGGATTTC
 
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JMFS125D10+           CAACAGGAAGTGTACAATATTCTATAACCTCTTCTAATTCAGAGAGCTGCTGAACACGAA
JMFS125C10+           CAACAGGAAGTGTGCAATATTCTATAACCTCTTCTAATTCAGAGAGTTGCTGAACTAGGC
JMFS105E12+           CAACAGGAAGTGTACAATATTCTATAACCTCTTCTAATTCAGAGAGCTGCTGAACACGAA
                      ____________________________________________________________
consensus             CAACAGGAAGTGTACAATATTCTATAACCTCTTCTAATTCAGAGAGCTGCTGAACACGAA
 
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JMFS125D10+           CCATATTGCTATATGCACGTTCATAACTTTCAAGAACCAATGCAGCAAGTTCCGTA    
JMFS125C10+           CCCTTTGTATATATGAACGTTCATAACTTTCAAGAACCAATGCAGCAAGATCCGTA    
JMFS105E12+           CCATATTGCTATATGCACGTTCATAACTTTCAAGAACCAATGCAGCAAGTTCCGTAGCCA
                      ____________________________________________________________
consensus             CCATATTGCTATATGCACGTTCATAACTTTCAAGAACCAATGCAGCAAGTTCCGTAGCCA
 
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JMFS105E12+           AACATTTTCTTGCTCTCTCAACATATTCACGAGCTTCATCATACTTCCCCCGGCGAACTA
                      ____________________________________________________________
consensus             AACATTTTCTTGCTCTCTCAACATATTCACGAGCTTCATCATACTTCCCCCGGCGAACTA
 
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JMFS105E12+           GTAGAACAGCCCTAAAAAATGTTCCACTACTACTTCCATCACCACTAGCAGTAGTATTTC
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consensus             GTAGAACAGCCCTAAAAAATGTTCCACTACTACTTCCATCACCACTAGCAGTAGTATTTC