Contig 004820:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS013A05+             TAAAATAAATGCAAAAATTGGTATCTTGTATCCGAGAGAAATATAGTTGAGTAAAGTA
                      ____________________________________________________________
consensus               TAAAATAAATGCAAAAATTGGTATCTTGTATCCGAGAGAAATATAGTTGAGTAAAGTA
 
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JMFS013A05+           CAAATCTTGAAGTGGGAGATCTTGTAAAACGTCGAGGGTTCCAGAAATCTGATTATTCTG
                      ____________________________________________________________
consensus             CAAATCTTGAAGTGGGAGATCTTGTAAAACGTCGAGGGTTCCAGAAATCTGATTATTCTG
 
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JMFS013A05+           CAAATGACTGGTGAAAAAGCGGTTAGATTCATAAACAAAAATGAAAAGAATCAAACCGAA
                      ____________________________________________________________
consensus             CAAATGACTGGTGAAAAAGCGGTTAGATTCATAAACAAAAATGAAAAGAATCAAACCGAA
 
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JMFS013A05+           ATAGAATACTAACAGAGTCACCAAGGACAGATTTCCTAGCGATGGTGGTAATCTCCCACT
                      ____________________________________________________________
consensus             ATAGAATACTAACAGAGTCACCAAGGACAGATTTCCTAGCGATGGTGGTAATCTCCCACT
 
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JMFS013A05+           TAAATTGTTATTGGATAAATCTAGATTCTTCAAATGAACGAGGCCTTCAAAGGAATCGGG
JMFS037H02+                                                    GGCCTTCAAAGGAATCGGG
JMFS076A02+                                                    GGCCTTCAAAGGAATCGGG
                      ____________________________________________________________
consensus             TAAATTGTTATTGGATAAATCTAGATTCTTCAAATGAACGAGGCCTTCAAAGGAATCGGG
 
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JMFS013A05+           AATTTCTCCGGTCAAATGGTTGTCATTTAGAGACATAGCTGATAGTTGAGACAGGGAAGA
JMFS037H02+           AATTTCTCCGGTCAAATGGTTGTCATTTAGAGACATAGCTGATAGTTGAGACAGGGAAGA
JMFS076A02+           AATTTCTCCGGTCAAATGGTTGTCATTTAGAGACATAGCTGATAGTTGAGACAGGGAAGA
                      ____________________________________________________________
consensus             AATTTCTCCGGTCAAATGGTTGTCATTTAGAGACATAGCTGATAGTTGAGACAGGGAAGA
 
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JMFS013A05+           TAAGGAATCAGGAATATTCCCAATAAACTCGTTATCTGAAAGAAACAGGTTATCCAGCGT
JMFS037H02+           TAAGGAATCAGGAATATTCCCAATAAACTCGTTATCTGAAAGAAACAGGTTATCCAGCGT
JMFS076A02+           TAAGGAATCAGGAATATTCCCAATAAACTCGTTATCTGAAAGAAACAGGTTATCCAGCGT
                      ____________________________________________________________
consensus             TAAGGAATCAGGAATATTCCCAATAAACTCGTTATCTGAAAGAAACAGGTTATCCAGCGT
 
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JMFS013A05+           AACCGGGAGATTGGATGGAATTGCGCCTCCAATGTGGTTGTTACTCAGATCTATTTTCTT
JMFS037H02+           AACCGGGAGATTGGATGGAATTGCGCCTCCAATGTGGTTGTTACTCAGATCTATTTTCTT
JMFS076A02+           AACCGGGAGATTGGATGGAATTGCGCCTCCAATGTGGTTGTTACTCAGATCTATTTTCTT
                      ____________________________________________________________
consensus             AACCGGGAGATTGGATGGAATTGCGCCTCCAATGTGGTTGTTACTCAGATCTATTTTCTT
 
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JMFS013A05+           GATCGAGGAAAATGATCCTAAGTTATTGCCCAATTCACCGCCCAAATTTGCAGCATTGAT
JMFS037H02+           GATCGAGGAAAATGATCCTAAGTTATTGCCCAATTCACCGCCCAAATTTGCAGCATTGAT
JMFS076A02+           GATCGAGGAAAATGATCCTAAGTTATTGCCCAATTCACCGCCCAAATTTGCAGCATTGAT
                      ____________________________________________________________
consensus             GATCGAGGAAAATGATCCTAAGTTATTGCCCAATTCACCGCCCAAATTTGCAGCATTGAT
 
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JMFS013A05+           TGTA                                                        
JMFS037H02+           TGTAATTGAAACTATGTTTGTACCCTCGCATTGAACGCCTTGCCATTTTCCATTACACGG
JMFS076A02+           TGTAATTGAAACTATGTTTGTACCCTCGCATTGAACGCCTTGCCATTTTCCATTACACGG
                      ____________________________________________________________
consensus             TGTAATTGAAACTATGTTTGTACCCTCGCATTGAACGCCTTGCCATTTTCCATTACACGG
 
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JMFS037H02+           GTCTCCATCGACACTCCACCCGGGTAGAGGAGGGGATTTCAAAGCAGCATATAAATTATT
JMFS076A02+           GTCTCCATCGACACTCCACCCGGGTAGAGGAGGGGATTTCAAAGCAGCATATAAATTATT
                      ____________________________________________________________
consensus             GTCTCCATCGACACTCCACCCGGGTAGAGGAGGGGATTTCAAAGCAGCATATAAATTATT
 
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JMFS037H02+           CATCGCAGCAACATCTTTAGGATTAGCCCCATCCACCATACGAATGGCCAAAATCAAGAA
JMFS076A02+           CATCGCAGCAACATCTTTAGGATTAGCCCCATCCACCATACGAATGGCCAAAATCAAGAA
                      ____________________________________________________________
consensus             CATCGCAGCAACATCTTTAGGATTAGCCCCATCCACCATACGAATGGCCAAAATCAAGAA
 
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JMFS037H02+           AAGTCCCACCATGACCTTTAAACTCAAGCAGAAAACAGCTAATTCATACCCACCCATTGA
JMFS076A02+           AAGTCCCACCATGACCTTTAAACTCAAGCAGAAAACAGCTAATTCATACCCACCCATTGA
                      ____________________________________________________________
consensus             AAGTCCCACCATGACCTTTAAACTCAAGCAGAAAACAGCTAATTCATACCCACCCATTGA
 
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JMFS037H02+           TCCAAAATATCACCTTTTTCCTCAATCAACTACACTTCTTTCAGAAAAATCCTCTCAATC
JMFS076A02+           TCCAAAATATCACCTTTTTCCTCAATCAACTACACTTCTTTCAGAAAAATCCTCTCAATC
                      ____________________________________________________________
consensus             TCCAAAATATCACCTTTTTCCTCAATCAACTACACTTCTTTCAGAAAAATCCTCTCAATC
 
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JMFS037H02+           GCTTGTTTCTCAACGTCGTACCGTCGTTCGGTGATTCAGATGATGCTCTGTAGAGCGTGA
JMFS076A02+           GCTTGTTTCTCAACGTCGTACCGTCGTTCGGTGATTCAGATGATGCTCTGTAGAGCGTGA
                      ____________________________________________________________
consensus             GCTTGTTTCTCAACGTCGTACCGTCGTTCGGTGATTCAGATGATGCTCTGTAGAGCGTGA