Contig 004802:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS019E04Sequence526004802 (2)ref|XP_004236784.1|1e-34PREDICTED: putative lysine-specific demethylase JMJ16 [Solanum lycopersicum] re
JMFS059G10Sequence628004802 (2)ref|XP_004236784.1|1e-22PREDICTED: putative lysine-specific demethylase JMJ16 [Solanum lycopersicum] re

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS019E04+ TTGGCAATTGACACACTCTTCACAT
                      ____________________________________________________________
consensus TTGGCAATTGACACACTCTTCACAT
 
. : . : . : . : . : . :
JMFS019E04+ CCACGGATAACCCCTTTAGGAAGCTGTGGCCTGAAGGAGACCTTCTGCTCAGAGTCAGAT
JMFS059G10+ GAAGNAGACCTTCTGCTCAGAGTCAGAT
                      ____________________________________________________________
consensus CCACGGATAACCCCTTTAGGAAGCTGTGGCCTGAAGGAGACCTTCTGCTCAGAGTCAGAT
 
. : . : . : . : . : . :
JMFS019E04+ TCATCTCCTGAGCTGTTCTCAACTTGGCCATAGTTCATACAAGGTCTACGCCTTATAGAC
JMFS059G10+ TCATCTCCTGAGCTGTTCTCAACTTGGCCATAGTTCATACAAGGTCTACGCCTTATAGAC
                      ____________________________________________________________
consensus TCATCTCCTGAGCTGTTCTCAACTTGGCCATAGTTCATACAAGGTCTACGCCTTATAGAC
 
. : . : . : . : . : . :
JMFS019E04+ TTCAGTTTTGCATCCTCCACACCCTCTAAATCAGGTTCAACCTTAGCTCTCTGTAATTGC
JMFS059G10+ TTCAGTTTTGCATCCTCCACACCCTCTAAATCAGGTTCAACCTTAGCTCTCTGTAATTGC
                      ____________________________________________________________
consensus TTCAGTTTTGCATCCTCCACACCCTCTAAATCAGGTTCAACCTTAGCTCTCTGTAATTGC
 
. : . : . : . : . : . :
JMFS019E04+ ATTTCACTTGAAGAGGCTAAGCAATTAGTTTTCTTTTCATTATCTTTGACCTTTTCCAGG
JMFS059G10+ ATTTCACTTGAAGAGGCTAAGCAATTAGTTTTCTTTTCATTATCTTTGACCTTTTCCAGG
                      ____________________________________________________________
consensus ATTTCACTTGAAGAGGCTAAGCAATTAGTTTTCTTTTCATTATCTTTGACCTTTTCCAGG
 
. : . : . : . : . : . :
JMFS019E04+ GTGAAGGATGCAAGTGACTCAAATCCAGGTGGAATTGTTGACATATCTATAGTTTCATCC
JMFS059G10+ GTGAAGGATGCAAGTGACTCAAATCCAGGTGGAATTGTTGACATATCTATAGTTTCATCC
                      ____________________________________________________________
consensus GTGAAGGATGCAAGTGACTCAAATCCAGGTGGAATTGTTGACATATCTATAGTTTCATCC
 
. : . : . : . : . : . :
JMFS019E04+ TTGACGCAGTGACTAAAGAGTTCTGTCCCCATGATAT---------------ATATGCAT
JMFS059G10+ TTGACGCAGTGACTAAAGAGTTCTGTCCCCATGATATCTGTTTAGCAATGAAATATGCAT
                      ____________________________________________________________
consensus TTGACGCAGTGACTAAAGAGTTCTGTCCCCATGATATCTGTTTAGCAATGAAATATGCAT
 
. : . : . : . : . : . :
JMFS019E04+ GTATGCTTGATCTTAGATCAAACTTTTCCAGTGACCTCAAGCAGCTGAAACTCCAAACCA
JMFS059G10+ GTATGCTTGATCTTAGATCAAACTTTTCCAGTGACCTCAAGCAGCTGAAACTCCAAACCA
                      ____________________________________________________________
consensus GTATGCTTGATCTTAGATCAAACTTTTCCAGTGACCTCAAGCAGCTGAAACTCCAAACCA
 
. : . : . : . : . : . :
JMFS019E04+ CCACTCCAATAGGTCAAGGCAATCTACAGCCCCTAGCCAGTGTGGGCACCCATCAACATT
JMFS059G10+ CCACTCCAATAGGTCAAGGCAATCTACAGCCCCTAGCCAGTGTGGGCACCCATCAACATT
                      ____________________________________________________________
consensus CCACTCCAATAGGTCAAGGCAATCTACAGCCCCTAGCCAGTGTGGGCACCCATCAACATT
 
. : . : . : . : . : . :
JMFS019E04+ TACCAACTAACCAAAATTGT
JMFS059G10+ TACCAACTAACCAAAATTGTATTTTGACCCGACCCTTATGACCCACTACATCTACTACAC
                      ____________________________________________________________
consensus TACCAACTAACCAAAATTGTATTTTGACCCGACCCTTATGACCCACTACATCTACTACAC
 
. : . : . : . : . : . :
JMFS059G10+ ATCTACTTTTCAGCCTTTCATTTCTCCCCACCCCCAAAGCCTCTTGCAGGCAGAGAAGAA
                      ____________________________________________________________
consensus ATCTACTTTTCAGCCTTTCATTTCTCCCCACCCCCAAAGCCTCTTGCAGGCAGAGAAGAA
 
. : . : . : . : . : . :
JMFS059G10+ GTAAATTCAAGAGAAAGGACAAATGAAATCCAGATATAGTTTCCTAATTTTGTTATTTGG
                      ____________________________________________________________
consensus GTAAATTCAAGAGAAAGGACAAATGAAATCCAGATATAGTTTCCTAATTTTGTTATTTGG