Contig 004788:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS039F11Sequence587004788 (5)ref|XP_010240985.1|4e-19PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 i
JMFS068G10Sequence616004788 (5)ref|XP_006343404.1|109PREDICTED: uncharacterized protein LOC102601228 [Solanum tuberosum]
JMFS164E11Sequence315004788 (5)
JMFS166F11Sequence315004788 (5)
JMSF043H11Sequence774004788 (5)ref|XP_009759865.1|2e-38PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11811021565ref|XP_009350305.1|3e-103PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03

Alignment

This contig is upended


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JMSF043H11+                                                   ATCCATTCCCCAGGAGAATT
                      ____________________________________________________________
consensus                                                     ATCCATTCCCCAGGAGAATT
 
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JMSF043H11+           TCCCTGGTCGGGGATTGTTAATACTAGTCCAAGATCTGATGATGTTTTGTTTTTTGGTTT
                      ____________________________________________________________
consensus             TCCCTGGTCGGGGATTGTTAATACTAGTCCAAGATCTGATGATGTTTTGTTTTTTGGTTT
 
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JMSF043H11+           TTGTGTTTACCATAAGTTTCATCTCCGGCATTAATGTGTCGCCGGCGTCGTCAAAGCTCT
                      ____________________________________________________________
consensus             TTGTGTTTACCATAAGTTTCATCTCCGGCATTAATGTGTCGCCGGCGTCGTCAAAGCTCT
 
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JMFS068G10+                            CCCTGCTTCAGAATGAGGTNTCCGTTGTTCTGCAGATAAGCCT
JMSF043H11+           CCCAAACTGGGCTATCACCCTGCTTCAGAATGAGGTTTCCGTTGTTCTGCAGATAAGCCT
                      ____________________________________________________________
consensus             CCCAAACTGGGCTATCACCCTGCTTCAGAATGAGGTTTCCGTTGTTCTGCAGATAAGCCT
 
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JMFS068G10+           CTACGGGGTTTCCGGCGCCGGAGACATTTGTTGACCATATGATATTTCTCCGGCCGTCCA
JMSF043H11+           CTACGGGGTTTCCGGCGCCGGAGACATTTGTTGACCATATGATATTTCTCCGGCCGTCCA
JMFS039F11+                        GGCGCCGGAGACATTTGTTGACCATATGATATTTCTCCGGCCGTCCA
                      ____________________________________________________________
consensus             CTACGGGGTTTCCGGCGCCGGAGACATTTGTTGACCATATGATATTTCTCCGGCCGTCCA
 
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JMFS068G10+           AAATCTGCAAATTCCCATCATCGCCGAGCTTGAAAAGGGGCTCAGAATCGTGATGAGGAA
JMSF043H11+           AAATCTGCAAATTCCCATCATCGCCGAGCTTGAAAAGGGGCTCAGAATCGTGATGAGGAA
JMFS039F11+           AAATCTGCAAATTCCCATCATCGCCGAGCTTGAAAAGGGGCTCAGAATCGTGATGAGGAA
                      ____________________________________________________________
consensus             AAATCTGCAAATTCCCATCATCGCCGAGCTTGAAAAGGGGCTCAGAATCGTGATGAGGAA
 
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JMFS068G10+           GCGGAGATTCTCTGTTTGCGACCCAAATCACGCTGTCGTTGAGGGGGCTTGGGGTGTACC
JMSF043H11+           GCGGAGATTCTCTGTTTGCGACCCAAATCACGCTGTCGTTGAGGGGGCTTGGGGTGTACC
JMFS039F11+           GCGGAGATTCTCTGTTTGCGACCCAAATCACGCTGTCGTTGAGGGGGCTTGGGGTGTACC
                      ____________________________________________________________
consensus             GCGGAGATTCTCTGTTTGCGACCCAAATCACGCTGTCGTTGAGGGGGCTTGGGGTGTACC
 
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JMFS068G10+           ATATCCCGAGAAAGGAAGGGGAAGAAGAAGAGTTCCCGGGGCGGAAGAATCCTAACTCGA
JMSF043H11+           ATATCCCGAGAAAGGAAGGGGAAGAAGAAGAGTTCCCGGGGCGGAAGAATCCTAACTCGA
JMFS039F11+           ATATCCCGAGAAAGGAAGGGGAAGAAGAAGAGTTCCCGGGGCGGAAGAATCATAACTCGA
                      ____________________________________________________________
consensus             ATATCCCGAGAAAGGAAGGGGAAGAAGAAGAGTTCCCGGGGCGGAAGAATCCTAACTCGA
 
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JMFS068G10+           ATTCCCCGCCGGCGGAGAATAAGGTCCGGTTTGGAGTCACCGGCTCGCCGGCCCTGAGAA
JMSF043H11+           ATTCCCCGCCGGCGGAGAATAAGGTCCGGTTTGGAGTCACCGGCTCGCCGGCCCTGAGAA
JMFS166F11+           ATTCCCCGCCGGCGGAGAATAAGGTCCGGTTTGGAGTCACCGGCTCGCCGGCCCTGAGAA
JMFS164E11+           ATTCCCCGCCGGCGGAGAATAAGGTCCGGTTTGGAGTCACCGGCTCGCCGGCCCTGAGAA
JMFS039F11+           ATTCCCCGCCGGCGGAGAATAAGGTCCGGTTTGGAGTCACCGGCTCGCCGGCCCTGAGAA
                      ____________________________________________________________
consensus             ATTCCCCGCCGGCGGAGAATAAGGTCCGGTTTGGAGTCACCGGCTCGCCGGCCCTGAGAA
 
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JMFS068G10+           TATAGCTGCTCATTCCAAGATTACAGAAAAAACACAGAAAGACTAATAAAACATACAAAA
JMSF043H11+           TATAGCTGCTCATTCCAAGATTACAGAAAAAACACAGAAAGACTAATAAAACATACAAAA
JMFS166F11+           TATAGCTGCTCATTCCAAGATTACAGAAAAAACACAGAAAGACTAATAAAACATACAAAA
JMFS164E11+           TATAGCTGCTCATTCCAAGATTACAGAAAAAACACAGAAAGACTAATAAAACATACAAAA
JMFS039F11+           TATAGCTGCTCATTCCAAGATTACAGAAAAAACACAGAAAGACTAATAAAACATACAAAA
                      ____________________________________________________________
consensus             TATAGCTGCTCATTCCAAGATTACAGAAAAAACACAGAAAGACTAATAAAACATACAAAA
 
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JMFS068G10+           TGCCACAAACACATTCCATTACGCACTGCTCGCAAAGTGGAAGAGACTAGAATCAAGTCT
JMSF043H11+           TGCCACAAACACATTCCATTACGCACTGCTCGCAAAGTGGAAGAGACTAGAATCAAGTCT
JMFS166F11+           TGCCACAAACACATTCCATTACGCACTGCTCGCAAAGTGGAAGAGACTAGAATCAAGTCT
JMFS164E11+           TGCCACAAACACATTCCATTACGCACTGCTCGCAAAGTGGAAGAGACTAGAATCAAGTCT
JMFS039F11+           TGCCACAAACACATTCCATTACGCACTGCTCGCAAAGTGGAAGAGACTAGAATCAAGTCT
                      ____________________________________________________________
consensus             TGCCACAAACACATTCCATTACGCACTGCTCGCAAAGTGGAAGAGACTAGAATCAAGTCT
 
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JMFS068G10+           GTCAAAGAACTATATGCGAAAAAGGGTTGGGTTTTACATGATTCATCAGAGCTTGTTGAA
JMSF043H11+           GTCAAAGAACTATATGCGAAAAAGGGTTGGGTTTTACATGATTCATCAGAGCTTGTTGAA
JMFS166F11+           GTCAAAGAACTATATGCGAAAAAGGGTTGGGTTTTACATGATTCATCAGAGCTTGTTGAA
JMFS164E11+           GTCAAAGAACTATATGCGAAAAAGGGTTGGGTTTTACATGATTCATCAGAGCTTGTTGAA
JMFS039F11+           GTCAAAGAACTATATGCGAAAAAGGGTTGGGTTTTACATGATTCATCAGAGCTTGTTGAA
                      ____________________________________________________________
consensus             GTCAAAGAACTATATGCGAAAAAGGGTTGGGTTTTACATGATTCATCAGAGCTTGTTGAA
 
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JMFS068G10+           GATGGTGAGCGTCGGAAATTGCAGGGTCAAGGTGGCGCGGCTGCCGGAGTTGGGTCGTTG
JMSF043H11+           GATGGTGAGCGTCGGAAATTGCAGGGTCAAGGTGGCGCGGCTGCCGGAGTTGGGTCGTTG
JMFS166F11+           GATGGTGAGCGTCGGAAATTGCAGGGTCAAGGTGGCGCGGCTGCCGGAGTTGGGTCGTTG
JMFS164E11+           GATGGTGAGCGTCGGAAATTGCAGGGTCAAGGTGGCGCGGCTGCCGGAGTTGGGTCGTTG
JMFS039F11+           GATGGTGAGCGTCGGAAATTGCAGGGTCAAGGTGGCGCGGCTGCCGGAGTTGGGTCGTTG
                      ____________________________________________________________
consensus             GATGGTGAGCGTCGGAAATTGCAGGGTCAAGGTGGCGCGGCTGCCGGAGTTGGGTCGTTG
 
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JMFS068G10+           TTTGGTTTGGTATAGATTATTCATTTCCCGTGT                           
JMSF043H11+           TTTGGTTTGGTATAGATTATTCATTTCCCGTGT                           
JMFS166F11+           TTTGGTTTGGTATAG                                             
JMFS164E11+           TTTGGTTTGGTATAG                                             
JMFS039F11+           TTTGGTTTGGTATAGATTATTCATTTCCCGTGTGATGAATCTTTGATTTACTGGAAGTCC
                      ____________________________________________________________
consensus             TTTGGTTTGGTATAGATTATTCATTTCCCGTGTGATGAATCTTTGATTTACTGGAAGTCC