Contig 004761:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023B20Sequence298000243 (2)dbj|BAJ34193.1|4e-54unnamed protein product [Thellungiella halophila]762004761 (3)emb|CBI20667.3|6e-126unnamed protein product [Vitis vinifera]
JMFF043O02Sequence629000243 (2)dbj|BAJ34193.1|5e-134unnamed protein product [Thellungiella halophila]580004761 (3)gb|KHN37049.1|4e-85Glycine dehydrogenase [decarboxylating], mitochondrial [Glycine soja]
JMFS013C09Sequence435004761 (3)gb|KHN37049.1|1e-43Glycine dehydrogenase [decarboxylating], mitochondrial [Glycine soja]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+                 ATTTNGCCAATATCATATACGTATATAGCCATGATGGGGTCGAAGGGACTTAC
                      ____________________________________________________________
consensus                    ATTTNGCCAATATCATATACGTATATAGCCATGATGGGGTCGAAGGGACTTAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          TGAAGCATCAAAGATAGCCATCTTGAATGCAAACTACATGGCTAAACGTTTAGAGAGTCA
                      ____________________________________________________________
consensus             TGAAGCATCAAAGATAGCCATCTTGAATGCAAACTACATGGCTAAACGTTTAGAGAGTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          CTATCCTGTTCTATTCCGTGGCGTCAATGGAACATGTGCACATGAATTCATTATTGATTT
                      ____________________________________________________________
consensus             CTATCCTGTTCTATTCCGTGGCGTCAATGGAACATGTGCACATGAATTCATTATTGATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          GAGGGGATTTAAGAATACTGCTGGAATCGAACCTGAAGATGTTGCTAAACGCCTTATGGA
rJMFF043O02+                                            GAAGATGTTGCTAAACGCCTTATGGA
                      ____________________________________________________________
consensus             GAGGGGATTTAAGAATACTGCTGGAATCGAACCTGAAGATGTTGCTAAACGCCTTATGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          TTATGGATTTCATGGACCAACTATGTCATGGCCCGTTCCTGGCACACTAATGATTGAGCC
rJMFF043O02+          TTATGGATTTCATGGACCAACTATGTCATGGCCCGTTCCTGGCACACTAATGATTGAGCC
                      ____________________________________________________________
consensus             TTATGGATTTCATGGACCAACTATGTCATGGCCCGTTCCTGGCACACTAATGATTGAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          AACTGAAAGTGAAAGCAAGGCAGAATTAGACAGATTTTGTGATGCACTCATCTCCATTAG
rJMFF043O02+          AACTGAAAGTGAAAGCAAGGCAGAATTAGACAGATTTTGTGATGCACTCATCTCCATTAG
JMFS013C09+                                                        ACTCATCTCCATTAG
                      ____________________________________________________________
consensus             AACTGAAAGTGAAAGCAAGGCAGAATTAGACAGATTTTGTGATGCACTCATCTCCATTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          GGAAGAGATTGGTCAGATTGAGAAGGGGAAGTTTGATCTTAACAATAACGTTCTTAAGAA
rJMFF043O02+          GGAAGAGATTGGTCAGATTGAGAAGGGGAAGTTTGATCTTAACAATAACGTTCTTAAGAA
JMFS013C09+           GGAATAGATTGGTCAGATTGAGAAGGGGAAGTTTGATCTTAACAATAACGTTTTTAAGAA
                      ____________________________________________________________
consensus             GGAAGAGATTGGTCAGATTGAGAAGGGGAAGTTTGATCTTAACAATAACGTTCTTAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          CGCTCCTCATCCACCGTCAGTGCTTATGGGTGATGAATGGACAAAACCATACTCTAGGGA
rJMFF043O02+          CGCTCCTCATCCACCGTCAGTGCTTATGGGTGATGAATGGACAAAACCATACTCTAGGGA
JMFS013C09+           CGCTCCTCATCCACCGTCAGTGCTTATGGGTGATGAATGGACAAAACCATACTCTAGGGA
                      ____________________________________________________________
consensus             CGCTCCTCATCCACCGTCAGTGCTTATGGGTGATGAATGGACAAAACCATACTCTAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          ATATGCTGCCTTCCCCGCTCCCTGGCTGAGAACTGCCAAATTCTGGCCGTCTACAGGGCG
rJMFF043O02+          ATATGCTGCCTTCCCCGCTCCCTGGCTGAGAACTGCCAAATTCTGGCCGTCTACAGGGCG
JMFS013C09+           ATATGCTGCCTTCCCCGCTCCCTGGGTGAGAACTGCCAAATTCTGGCCGTTTACAGGGCG
                      ____________________________________________________________
consensus             ATATGCTGCCTTCCCCGCTCCCTGGCTGAGAACTGCCAAATTCTGGCCGTCTACAGGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          TGTTGACAATGTGTATGGAGACCGCAACCTTATCTGCACTCTCCTTACTCCATCACAGAT
rJMFF043O02+          TGTTGACAATGTGTATGGAGACCGCAACCTTATCTGCACTCTCCTTACTCCATCACAGAT
JMFS013C09+           TGTTGACAATGTGTATGGAGACCGCAACCTTATTTGCACTCTCCTTACGCCATCACAGAT
                      ____________________________________________________________
consensus             TGTTGACAATGTGTATGGAGACCGCAACCTTATCTGCACTCTCCTTACTCCATCACAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          GGTTGAAGAACAGGCTGCTGCAGCCACTGCTTAAGCCACATTCCAGAATTGAAGTATATA
rJMFF043O02+          GGTTGAAGAACAGGCTGCTGCAGCCACTGCTTAAGCCACATTCCAGAATTGAAGTATATA
JMFS013C09+           GGTTGAAGAACAGGCTGCTGCAGCCACTGCTTAAGCCACATTCCAGAATTGAAGTATATA
                      ____________________________________________________________
consensus             GGTTGAAGAACAGGCTGCTGCAGCCACTGCTTAAGCCACATTCCAGAATTGAAGTATATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          TTTTCAAAACCCAAGTTTTTATTCCCTTGTAGTTTGATGACTTTTACTTTTATCCATATT
rJMFF043O02+          TTTTCAAAACCCAAGTTTTTATTCCCTTGTAGTTTGATGACTTTTACTTTTATCCATATT
JMFS013C09+           TTTTCAAAACCCAAGTTTTTATTCCCTTGTAGTTTGATGACTTTTACTTTTATCCATATT
                      ____________________________________________________________
consensus             TTTTCAAAACCCAAGTTTTTATTCCCTTGTAGTTTGATGACTTTTACTTTTATCCATATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B20+          CATCAACACCTGCTCTATCAACAATTGTTTATATCTGGAGCT                  
rJMFF043O02+          CATCAACACCTGCTCTATCAACAATTGTTTATATCTGGAGCTTGCAGCCCAGCCTTTTT 
JMFS013C09+           CATCAACACCTGCTCTATCAACAATTGTTTATATCTGGAGCTTGCAGCCCAGCCTTTTTT
                      ____________________________________________________________
consensus             CATCAACACCTGCTCTATCAACAATTGTTTATATCTGGAGCTTGCAGCCCAGCCTTTTTT