Contig 004744:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN005N21Sequence612004744 (4)ref|XP_009793041.1|1e-81PREDICTED: miraculin-like [Nicotiana sylvestris]
JMFN006M02Sequence618004744 (4)ref|XP_009793041.1|2e-81PREDICTED: miraculin-like [Nicotiana sylvestris]
JMFN028J12Sequence611004744 (4)ref|XP_009793041.1|1e-80PREDICTED: miraculin-like [Nicotiana sylvestris]
JMFN041A16Sequence607004744 (4)ref|XP_009793041.1|3e-79PREDICTED: miraculin-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN005N21+                                                    TGAATGGAACATCATCAGT
JMFN006M02+                                                           AACATCATCAGT
JMFN028J12+                                                                CATCAGT
JMFN041A16+                                                                CATCAGT
                      ____________________________________________________________
consensus                                                      TGAATGGAACATCATCAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN005N21+           CAAAGCCAAAAACCTCACCCCATCCTGCTCAAAGATTCCGACATCTTTGCAGATAACCTT
JMFN006M02+           CAAAGCCAAAAACCTCACCCCATCCTGCTCAAAGATTCCGACATCTTTGCAGATAACCTT
JMFN028J12+           CAAAGCCAAAACCCTCACCCCATCCTGCTCAAAGATTCCGACATCTTTGCAGATAACCTT
JMFN041A16+           CAAAGCCAAAAACCTCACCCCATCGTGCTCAAAGATTCCGACATCTTTGCAGATATCCTT
                      ____________________________________________________________
consensus             CAAAGCCAAAAACCTCACCCCATCCTGCTCAAAGATTCCGACATCTTTGCAGATAACCTT
 
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JMFN005N21+           GCAATAGTTGCACACGGTCGGACAAAACACAAACTTGTAAACGCTCTTATACTTCTGGAT
JMFN006M02+           GCAATAGTTGCACACGGTCGGACAAAACACAAACTTGTAAACGCTCTTATACTTCTGGAT
JMFN028J12+           GCAATAGTTGCACACGGTCGGACAAAACACAAACTTGTAAACGCTCTTATACTTCTGGAT
JMFN041A16+           GCAATAGTTGCTCACGGTCGGACAAAACACAAACTTGTAAACGCTCTTATACTTCTGGAT
                      ____________________________________________________________
consensus             GCAATAGTTGCACACGGTCGGACAAAACACAAACTTGTAAACGCTCTTATACTTCTGGAT
 
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JMFN005N21+           CTTAAACCAACTGCTTAACGTTTGAGGGCCGGGATTTCCTTCCACCCCTCCGGTCTTCAC
JMFN006M02+           CTTAAACCAACTGCTTAACGTTTGAGGGCCGGGATTTCCTTCCACCCCTCCGGTCTTCAC
JMFN028J12+           CTTAAACCAACTGCTTAACGTTTGAGGGCCGGGATTTCCTTCCACCCCTCCGGTCTTCAC
JMFN041A16+           CTTAAACCAACTGCTTAACGTTTGAGGGCCGGGATTTCCTTCCACCCCTCCGGTCTTCAC
                      ____________________________________________________________
consensus             CTTAAACCAACTGCTTAACGTTTGAGGGCCGGGATTTCCTTCCACCCCTCCGGTCTTCAC
 
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JMFN005N21+           GAAATATTTGTTCACCGACTCGTCGTAGGCGTCGACTTTCCACACCGTCTTCCTGGCGCA
JMFN006M02+           GAAATATTTGTTCACCGACTCGTCGTAGGCGTCGACTTTCCACACCGTCTTCCTGGCGCA
JMFN028J12+           GAAATATTTGTTCACCGACTCGTCGTAGGCGTCGACTTTCCACACCGTCTTCCTGGCGCA
JMFN041A16+           GAAATATTTGTTCACCGACTCGTCGTAGGCGTCGACTTTCCACACCGTCTTCCTGGCGCA
                      ____________________________________________________________
consensus             GAAATATTTGTTCACCGACTCGTCGTAGGCGTCGACTTTCCACACCGTCTTCCTGGCGCA
 
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JMFN005N21+           GATGGTCGGGGTGTAGAACCTGACGTTGAGGTCAGTTGATAAGCGGACCACGCCGCCGGA
JMFN006M02+           GATGGTCGGGGTGTAGAACCTGACGTTGAGGTCAGTTGATAAGCGGACCACGCCGCCGGA
JMFN028J12+           GATGGTCGGGGTGTAGAACCTGACGTTGAGGTCAGTTGATAAGCGGACCACGCCGCCGGA
JMFN041A16+           GATGGTCGGGGTGTAGAACCTGACGTTGAGGTCAGTTGATAAGCGAACCACGCCGCCGGA
                      ____________________________________________________________
consensus             GATGGTCGGGGTGTAGAACCTGACGTTGAGGTCAGTTGATAAGCGGACCACGCCGCCGGA
 
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JMFN005N21+           GGTGGCGTTGTTCACCGGCGTGAGTACCACGGGTATGCCTTTCTGGACTTCATCGGCTTC
JMFN006M02+           GGTGGCGTTGTTCACCGGCGTGAGTACCACGGGTATGCCTTTCTGGACTTCATCGGCTTC
JMFN028J12+           GGTGGCGTTGTTCACCGGCGTGAGTACCACGGGTATGCCTTTCTGGACTTCATCGGCTTC
JMFN041A16+           GGTGGCGTTGTTCACCGGCGTGAGTACCACGGGTATGCCTTTCTGGACTTCATCGGCTTC
                      ____________________________________________________________
consensus             GGTGGCGTTGTTCACCGGCGTGAGTACCACGGGTATGCCTTTCTGGACTTCATCGGCTTC
 
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JMFN005N21+           CTGGATGACGTCCAGCGGGCAAATGGTCGCGTTTGATTTGATGTTGGCCGGGTATAGTCC
JMFN006M02+           CTGGATGACGTCCAGCGGGCAAATGGTCGCGTTTGATTTGATGTTGGCCGGGTATAGTCC
JMFN028J12+           CTGGATGACGTCCAGCGGGCAAATGGTCGCGTTTGATTTGATGTTGGCCGGGTATAGTCC
JMFN041A16+           CTGGATGACGTCCAGCGGGCAAATGGTCGCGTTTGATTTGATGTTGGCCGGGTATAGTCC
                      ____________________________________________________________
consensus             CTGGATGACGTCCAGCGGGCAAATGGTCGCGTTTGATTTGATGTTGGCCGGGTATAGTCC
 
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JMFN005N21+           GCCGCCGTGGCCGCGGATCACCGGGAGCACGAAATAGTTTGACCCCACTTTCAGCACTTC
JMFN006M02+           GCCGCCGTGGCCGCGGATCACCGGGAGCACGAAATAGTTTGACCCCACTTTCAGCACTTC
JMFN028J12+           GCCGCCGTGGCCGCGGATCACCGGGAGCACGAAATAGTTTGACCCCACTTTCAGCACTTC
JMFN041A16+           GCCGCCGTGGCCGCGGATCACCGGGAGCACGAAATAGTTTGACCCCACTTTCAGCACTTC
                      ____________________________________________________________
consensus             GCCGCCGTGGCCGCGGATCACCGGGAGCACGAAATAGTTTGACCCCACTTTCAGCACTTC
 
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JMFN005N21+           GCCCTTGGTGTCGCGGACGGGAGACGGTAGCGACGACGCGCCGGCTATCTGGTGGTGTGG
JMFN006M02+           GCCCTTGGTGTCGCGGACGGGAGACGGTAGCGACGACGCGCCGGCTATCTGGTGGTGTGG
JMFN028J12+           GCCCTTGGTGTCGCGGACGGGAGACGGTAGCGACGACGCGCCGGCTATCTGGTGGTGTGG
JMFN041A16+           GCCCTTGGTGTCGCGGACGGGAGACGGTAGCGACGACGCGCCGGCTATCTGGTGGTGTGG
                      ____________________________________________________________
consensus             GCCCTTGGTGTCGCGGACGGGAGACGGTAGCGACGACGCGCCGGCTATCTGGTGGTGTGG
 
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JMFN005N21+           GAAGAAGACGAGTGAAAGCAGCAAGATCAGTAATAACGCCTTCATTATATAAA       
JMFN006M02+           GAAGAAGACGAGTGAAAGCAGCAAGATCAGTAATAACGCCTTCATTATATAAA       
JMFN028J12+           GAAGAAGACGAGTGAAAGCAGCAAGATCAGTAATAACGCCTTCATTATATAAA       
JMFN041A16+           GAAGAAGACGAGTGAAAGCAGCAAGATCAGTAATAACGCCTTCATTATATAAAGATTGAG
                      ____________________________________________________________
consensus             GAAGAAGACGAGTGAAAGCAGCAAGATCAGTAATAACGCCTTCATTATATAAAGATTGAG