Contig 004743:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034A11Sequence633004743 (8)ref|XP_009407381.1|1e-58PREDICTED: transmembrane protein 256 homolog [Musa acuminata subsp. malaccensis
JMFF040F20Sequence523004743 (8)ref|XP_006447748.1|7e-60hypothetical protein CICLE_v10017136mg [Citrus clementina] ref|XP_006469516.1| P582004743 (8)ref|XP_006447748.1|1e-59hypothetical protein CICLE_v10017136mg [Citrus clementina] ref|XP_006469516.1| P
JMFN040P09Sequence626004743 (8)ref|XP_008379990.1|5e-59PREDICTED: transmembrane protein 256 homolog [Malus domestica]
JMSF043E08Sequence570004743 (8)ref|XP_008379990.1|2e-59PREDICTED: transmembrane protein 256 homolog [Malus domestica]517004743 (8)ref|XP_008379990.1|9e-60PREDICTED: transmembrane protein 256 homolog [Malus domestica]
JMSF048C15Sequence609004743 (8)ref|XP_006447748.1|2e-59hypothetical protein CICLE_v10017136mg [Citrus clementina] ref|XP_006469516.1| P559004743 (8)ref|XP_006447748.1|1e-59hypothetical protein CICLE_v10017136mg [Citrus clementina] ref|XP_006469516.1| P

Alignment

This contig is upended


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JMSF048C15-                              GGCAAGAGAAGAGAAAAGAAAGAATTCAATGAAGAGAGTGG
rJMSF043E08+                                    GAAGAGAAAAGAAAGAATTCAATGAAGAGAGTGG
rJMSF048C15+                                 AGAGAAGAGAAAAGAAAGAATTCAATGAAGAGAGTGG
JMFF040F20-                                  AGAGAAGAGAAAAGAAAGAATTCAATGAAGAGAGTGG
rJMFF040F20+                                 AGAGAAGAGAAAAGAAAGAATTCAATGAAGAGAGTGG
JMSF043E08-                                     GAAGAGAAAAGAAAGAATTCAATGAAGAGAGTGG
rJMFF034A11+                                  GAGAAGAGAAAAGAAAGAATTCAATGAAGAGAGTGG
JMFN040P09-                                             AAGAAAGAATTCAATGAAGAGAGTGG
                      ____________________________________________________________
consensus                                GGCAAGAGAAGAGAAAAGAAAGAATTCAATGAAGAGAGTGG
 
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JMSF048C15-           CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
rJMSF043E08+          CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
rJMSF048C15+          CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
JMFF040F20-           CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
rJMFF040F20+          CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
JMSF043E08-           CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
rJMFF034A11+          CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
JMFN040P09-           CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
                      ____________________________________________________________
consensus             CAATGGATCCTTATATGTGGCATAAAATTGCTGGAATTTCTGGTGTGGCTGCTCTTGGAT
 
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JMSF048C15-           TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
rJMSF043E08+          TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
rJMSF048C15+          TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
JMFF040F20-           TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
rJMFF040F20+          TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
JMSF043E08-           TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
rJMFF034A11+          TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
JMFN040P09-           TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
                      ____________________________________________________________
consensus             TGGGCACTTACGGCGCGCACGCATTCAAGCCAAAGAATCCCGCTTACACAGAGGTCTGGC
 
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JMSF048C15-           GAACTGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
rJMSF043E08+          GAACTGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
rJMSF048C15+          GAACTGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
JMFF040F20-           GAACCGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
rJMFF040F20+          GAACCGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
JMSF043E08-           GAACTGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
rJMFF034A11+          GAACTGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
JMFN040P09-           GAACTGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
                      ____________________________________________________________
consensus             GAACTGCATCACTATATCACTTGGTTCACACAGCAGCTCTTCTTGCTTCTCCTATTACCA
 
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JMSF048C15-           AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
rJMSF043E08+          AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
rJMSF048C15+          AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
JMFF040F20-           AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
rJMFF040F20+          AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
JMSF043E08-           AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
rJMFF034A11+          AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
JMFN040P09-           AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
                      ____________________________________________________________
consensus             AACGACCTCACATTTTTGGAGGGCTTTTAACTGCTGGAATAGTTGCATTTTCTGGAACGT
 
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JMSF048C15-           GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
rJMSF043E08+          GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
rJMSF048C15+          GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
JMFF040F20-           GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
rJMFF040F20+          GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
JMSF043E08-           GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
rJMFF034A11+          GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
JMFN040P09-           GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
                      ____________________________________________________________
consensus             GTTATGCAGTTGCATATCTCGAAGACAGAAAGTATTCTAAGATAGCACCATTTGGTGGTT
 
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JMSF048C15-           TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAG                    
rJMSF043E08+          TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAGGTTGGACTTTTTGATGCAGT
rJMSF048C15+          TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAGGTTGGACTTTTTGATGCAGT
JMFF040F20-           TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAGGTTGGACTTTTTGATGCAGT
rJMFF040F20+          TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAGGTTGGACTTTTTGATGCAGT
JMSF043E08-           TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAGGTTGGACTTTTTGATGCAGT
rJMFF034A11+          TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAGGTTGGACTTTTTGATGCAGT
JMFN040P09-           TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAGGTTGGACTTTTTGATGCAGT
                      ____________________________________________________________
consensus             TTGCACTTATTGCTGCTTGGGGAAGTTTGTTGGTTTAAAGGTTGGACTTTTTGATGCAGT
 
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rJMSF043E08+          ATTGCAGTTGCTACTTATGGTCGATCGATACTAGAAACTCTGATCTGGCCAAATGAATAT
rJMSF048C15+          ATTGCAGTTGCTACTTATGGTCGATCGATACTAGAAACTCTGATCTGGCCAAATGAATAT
JMFF040F20-           ATTGCAGTTGCTACTTATGGTCGATCGATACTAGAAACTCTGATCTGGCCAAATGAATAT
rJMFF040F20+          ATTGCAGTTGCTACTTATGGTCGATCGATACTAGAAACTCTGATCTGGCCAAATGAATAT
JMSF043E08-           ATTGCAGTTGCTACTTATGGTCGATCGATACTAGAAACTCTGATCTGGCCAAATGAATAT
rJMFF034A11+          ATTGCAGTTGCTACTTATGGTCGATCGATACTAGAAACTCTGATCTGGCCAAATGAATAT
JMFN040P09-           ATTGCAGTTGCTACTTATGGTCGATCGATACTAGAAACTCTGATCTGGCCAAATGAATAT
                      ____________________________________________________________
consensus             ATTGCAGTTGCTACTTATGGTCGATCGATACTAGAAACTCTGATCTGGCCAAATGAATAT
 
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rJMSF043E08+          CGTTACATCACATACTTGTGGAATTTCTTTTGCAGTCATTGCTACACTAAAACTATCT  
rJMSF048C15+          CGTTACATCACATACTTGTGGAATTTCTTTTGCAGTCATTGCTACACTAAAACTATCTTG
JMFF040F20-           CGTTACATCACATACTTGTGGAATTTCTTTTGCAGTCATTGCTACACTAAAACTATCTTG
rJMFF040F20+          CGTTACATCACATACTTGTGGAATTTCTTTTGCAGTCATTGCTACACTAAAACTATCTTG
JMSF043E08-           CGTTACATCACATACTTGTGGAATTTCTTTTGCAGTCATTGCTACACTAAAACTATCTTG
rJMFF034A11+          CGTTACATCACATACTTGTGGAATTTCTTTTGCAGTCATTGCTACACTAAAACTATCTTG
JMFN040P09-           CGTTACATCACATACTTATGGAATTTCTTTTGCAGTCATTGCTACACTAAAACTATCTTG
                      ____________________________________________________________
consensus             CGTTACATCACATACTTGTGGAATTTCTTTTGCAGTCATTGCTACACTAAAACTATCTTG
 
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rJMSF048C15+          TTCTCCTCCTTAAGCTATGTAAACCAAATCGGCATTGT                      
JMFF040F20-           TT                                                          
rJMFF040F20+          TTCTCCTCCTTAAGCTATGTAAACCAAATCGGCATTGTTGCAACCCTCATGATTCT    
JMSF043E08-           TTCTCCTCCTTAAGCTATGTAAACCAAATCGGCATTGTTGCAA                 
rJMFF034A11+          TTCTCCTCCTTAAGCTATGTAAACCAAATCGGCATTGTTGCAACCCTCATGATTCTTGAA
JMFN040P09-           TTCTCCTCCTTAAGCTATGTAAACCAAATCGGCATTGTTGCAACCCTCATGATTCTTGAA
                      ____________________________________________________________
consensus             TTCTCCTCCTTAAGCTATGTAAACCAAATCGGCATTGTTGCAACCCTCATGATTCTTGAA
 
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rJMFF034A11+          TATAAATTGATCATATGTTCCAGACTGATTTTGCTATTCTGATAGTCACTTA        
JMFN040P09-           TATAAATTGATCATATGTTCCAGACTGATTTTGCTATTCTGATAGTCACTTAATGAATGT
                      ____________________________________________________________
consensus             TATAAATTGATCATATGTTCCAGACTGATTTTGCTATTCTGATAGTCACTTAATGAATGT